Guide to the Human Genome
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Name: RAB13 Sequence: fasta or formatted (203aa) NCBI GI: 4506363
Description:

RAB13, member RAS oncogene family

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         14           1
 C cysteine            2.0          4           1
 D aspartate           6.9         14           1
 E glutamate           5.9         12           1
 F phenylalanine       4.4          9           2
 G glycine             7.9         16           2
 H histidine           1.0          2           1
 I isoleucine          8.4         17           2
 K lysine             11.3         23           2
 L leucine             7.9         16           3
 M methionine          2.5          5           1
 N asparagine          5.9         12           2
 P proline             1.0          2           2
 Q glutamine           2.5          5           1
 R arginine            5.4         11           2
 S serine              6.9         14           2
 T threonine           6.4         13           2
 V valine              3.4          7           1
 W tryptophan          1.0          2           1
 Y tyrosine            2.5          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB13, member RAS oncogene family 
LOC100131294          0.971   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.971   PREDICTED: similar to hCG24991 
LOC100131294          0.971   PREDICTED: similar to hCG24991 
RAB8B                 0.647   RAB8B, member RAS oncogene family 
RAB8A                 0.631   mel transforming oncogene 
RAB10                 0.597   ras-related GTP-binding protein RAB10 
RAB1A                 0.505   RAB1A, member RAS oncogene family isoform 1 
RAB1B                 0.503   RAB1B, member RAS oncogene family 
RAB35                 0.461   RAB35, member RAS oncogene family 
RAB26                 0.435   RAB26, member RAS oncogene family 
RAB3C                 0.429   RAB3C, member RAS oncogene family 
RAB3A                 0.424   RAB3A, member RAS oncogene family 
RAB3B                 0.421   RAB3B, member RAS oncogene family 
RAB2B                 0.419   RAB2B protein isoform 1 
RAB2A                 0.416   RAB2A, member RAS oncogene family 
RAB3D                 0.416   RAB3D, member RAS oncogene family 
RAB37                 0.416   RAB37, member RAS oncogene family isoform 2 
RAB12                 0.408   RAB12, member RAS oncogene family 
RAB43                 0.395   RAB43 protein 
RAB19                 0.390   RAB19, member RAS oncogene family 
RAB11B                0.387   RAB11B, member RAS oncogene family 
RAB11A                0.387   Ras-related protein Rab-11A 
RAB37                 0.385   RAB37, member RAS oncogene family isoform 3 
RAB39B                0.380   RAB39B, member RAS oncogene family 
RAB30                 0.374   RAB30, member RAS oncogene family 
RAB4B                 0.366   ras-related GTP-binding protein 4b 
RAB4A                 0.364   RAB4A, member RAS oncogene family 
RAB14                 0.361   GTPase Rab14 
RAB27B                0.359   RAB27B, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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