Guide to the Human Genome
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Name: RAB14 Sequence: fasta or formatted (215aa) NCBI GI: 19923483
Description:

GTPase Rab14

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         21           2
 C cysteine            1.9          4           1
 D aspartate           4.7         10           1
 E glutamate           7.4         16           2
 F phenylalanine       3.7          8           1
 G glycine             8.4         18           2
 H histidine           1.9          4           1
 I isoleucine          7.0         15           3
 K lysine              5.6         12           2
 L leucine             7.4         16           2
 M methionine          1.9          4           1
 N asparagine          4.7         10           1
 P proline             3.3          7           1
 Q glutamine           5.6         12           1
 R arginine            5.1         11           2
 S serine              5.6         12           2
 T threonine           6.5         14           1
 V valine              4.2          9           1
 W tryptophan          0.9          2           1
 Y tyrosine            4.7         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GTPase Rab14 
RAB4A                 0.564   RAB4A, member RAS oncogene family 
RAB4B                 0.552   ras-related GTP-binding protein 4b 
RAB2A                 0.547   RAB2A, member RAS oncogene family 
RAB2B                 0.533   RAB2B protein isoform 1 
RAB11B                0.389   RAB11B, member RAS oncogene family 
RAB11A                0.387   Ras-related protein Rab-11A 
RAB2B                 0.387   RAB2B protein isoform 2 
RAB1A                 0.365   RAB1A, member RAS oncogene family isoform 1 
RAB39                 0.363   RAB39, member RAS oncogene family 
RAB25                 0.358   RAB25 
RAB8B                 0.353   RAB8B, member RAS oncogene family 
RAB1B                 0.350   RAB1B, member RAS oncogene family 
RAB39B                0.343   RAB39B, member RAS oncogene family 
RAB43                 0.338   RAB43 protein 
RAB13                 0.336   RAB13, member RAS oncogene family 
RAB19                 0.336   RAB19, member RAS oncogene family 
RAB8A                 0.333   mel transforming oncogene 
RAB30                 0.333   RAB30, member RAS oncogene family 
LOC100131294          0.328   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.328   PREDICTED: similar to hCG24991 
LOC100131294          0.328   PREDICTED: similar to hCG24991 
RAB37                 0.328   RAB37, member RAS oncogene family isoform 3 
RAB37                 0.328   RAB37, member RAS oncogene family isoform 2 
RAB10                 0.324   ras-related GTP-binding protein RAB10 
RAB26                 0.321   RAB26, member RAS oncogene family 
RAB18                 0.316   RAB18, member RAS oncogene family 
RAB3A                 0.314   RAB3A, member RAS oncogene family 
RAB12                 0.307   RAB12, member RAS oncogene family 
RAB3C                 0.302   RAB3C, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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