Guide to the Human Genome
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Name: RAB9B Sequence: fasta or formatted (201aa) NCBI GI: 7705963
Description:

RAB9B, member RAS oncogene family

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         10           1
 C cysteine            3.0          6           2
 D aspartate           8.0         16           2
 E glutamate           8.0         16           2
 F phenylalanine       6.0         12           1
 G glycine             7.5         15           2
 H histidine           2.0          4           1
 I isoleucine          2.5          5           1
 K lysine              5.5         11           1
 L leucine             9.5         19           3
 M methionine          2.0          4           1
 N asparagine          4.5          9           1
 P proline             2.0          4           1
 Q glutamine           4.5          9           1
 R arginine            4.5          9           1
 S serine              6.5         13           2
 T threonine           6.5         13           2
 V valine              8.5         17           2
 W tryptophan          1.5          3           1
 Y tyrosine            3.0          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB9B, member RAS oncogene family 
RAB9A                 0.774   RAB9A, member RAS oncogene family 
RAB7A                 0.474   RAB7, member RAS oncogene family 
RAB7B                 0.297   RAB7B, member RAS oncogene family 
RAB11A                0.287   Ras-related protein Rab-11A 
RAB11B                0.282   RAB11B, member RAS oncogene family 
LOC100131294          0.272   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.272   PREDICTED: similar to hCG24991 
LOC100131294          0.272   PREDICTED: similar to hCG24991 
RAB13                 0.262   RAB13, member RAS oncogene family 
RAB18                 0.262   RAB18, member RAS oncogene family 
RAB8B                 0.262   RAB8B, member RAS oncogene family 
RAB8A                 0.256   mel transforming oncogene 
RAB4A                 0.256   RAB4A, member RAS oncogene family 
RAB14                 0.254   GTPase Rab14 
RAB37                 0.254   RAB37, member RAS oncogene family isoform 3 
RAB25                 0.254   RAB25 
RAB1A                 0.251   RAB1A, member RAS oncogene family isoform 1 
RAB1B                 0.251   RAB1B, member RAS oncogene family 
RAB27A                0.246   Ras-related protein Rab-27A 
RAB27A                0.246   Ras-related protein Rab-27A 
RAB27A                0.246   Ras-related protein Rab-27A 
RAB27A                0.246   Ras-related protein Rab-27A 
RAB37                 0.244   RAB37, member RAS oncogene family isoform 2 
RAB30                 0.244   RAB30, member RAS oncogene family 
RAB4B                 0.244   ras-related GTP-binding protein 4b 
RAB23                 0.238   Ras-related protein Rab-23 
RAB10                 0.238   ras-related GTP-binding protein RAB10 
RAB23                 0.238   Ras-related protein Rab-23 
RAB26                 0.236   RAB26, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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