Guide to the Human Genome
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Name: RAB25 Sequence: fasta or formatted (213aa) NCBI GI: 116812567
Description:

RAB25

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         21           2
 C cysteine            0.9          2           2
 D aspartate           3.3          7           1
 E glutamate           8.9         19           2
 F phenylalanine       4.7         10           1
 G glycine             7.5         16           1
 H histidine           1.4          3           1
 I isoleucine          4.2          9           1
 K lysine              4.7         10           1
 L leucine             9.4         20           2
 M methionine          1.9          4           1
 N asparagine          4.7         10           2
 P proline             1.4          3           1
 Q glutamine           3.3          7           1
 R arginine            6.1         13           1
 S serine              6.6         14           1
 T threonine           8.9         19           2
 V valine              8.5         18           2
 W tryptophan          0.9          2           1
 Y tyrosine            2.8          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB25 
RAB11A                0.587   Ras-related protein Rab-11A 
RAB11B                0.566   RAB11B, member RAS oncogene family 
RAB2A                 0.380   RAB2A, member RAS oncogene family 
RAB14                 0.375   GTPase Rab14 
RAB4B                 0.372   ras-related GTP-binding protein 4b 
RAB2B                 0.365   RAB2B protein isoform 1 
RAB4A                 0.360   RAB4A, member RAS oncogene family 
RAB8B                 0.357   RAB8B, member RAS oncogene family 
RAB1B                 0.355   RAB1B, member RAS oncogene family 
RAB8A                 0.349   mel transforming oncogene 
RAB19                 0.347   RAB19, member RAS oncogene family 
RAB43                 0.342   RAB43 protein 
RAB30                 0.342   RAB30, member RAS oncogene family 
RAB5C                 0.337   RAB5C, member RAS oncogene family isoform a 
RAB5C                 0.337   RAB5C, member RAS oncogene family isoform b 
RAB13                 0.337   RAB13, member RAS oncogene family 
RAB1A                 0.332   RAB1A, member RAS oncogene family isoform 1 
LOC100131294          0.332   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.332   PREDICTED: similar to hCG24991 
LOC100131294          0.332   PREDICTED: similar to hCG24991 
RAB10                 0.332   ras-related GTP-binding protein RAB10 
RAB5A                 0.329   RAB5A, member RAS oncogene family 
RAB35                 0.327   RAB35, member RAS oncogene family 
RAB3D                 0.327   RAB3D, member RAS oncogene family 
RAB5B                 0.324   RAB5B, member RAS oncogene family 
RAB3B                 0.321   RAB3B, member RAS oncogene family 
RAB31                 0.316   RAB31, member RAS oncogene family 
RAB3C                 0.314   RAB3C, member RAS oncogene family 
RAB37                 0.314   RAB37, member RAS oncogene family isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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