Search of human proteins with 4758974

Search of human proteins with 4758974

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758974 persephin precursor [Homo sapiens]
         (156 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758974 persephin precursor [Homo sapiens]                         327   2e-90
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]       94   4e-20
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho...    94   4e-20
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho...    94   4e-20
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho...    94   4e-20
gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho...    94   4e-20
gi|4758826 neurturin preproprotein [Homo sapiens]                      88   3e-18
gi|40549413 glial cell derived neurotrophic factor isoform 3 [Ho...    68   3e-12
gi|40549411 glial cell derived neurotrophic factor isoform 2 pre...    68   3e-12
gi|4503975 glial cell derived neurotrophic factor isoform 1 prep...    68   3e-12
gi|5031613 growth differentiation factor 11 precursor [Homo sapi...    36   0.015
gi|4885259 myostatin [Homo sapiens]                                    34   0.057
gi|13899247 retbindin isoform 2 [Homo sapiens]                         33   0.098
gi|124486584 retbindin isoform 1 [Homo sapiens]                        33   0.098
gi|154813204 inhibin beta B subunit preproprotein [Homo sapiens]       32   0.29 
gi|5031795 inhibin beta C chain preproprotein [Homo sapiens]           31   0.37 
gi|42475941 zinc finger protein 261 [Homo sapiens]                     29   1.8  
gi|4827067 zinc finger protein 261 [Homo sapiens]                      29   1.8  
gi|239757232 PREDICTED: hypothetical protein [Homo sapiens]            28   3.2  
gi|239751740 PREDICTED: hypothetical protein [Homo sapiens]            28   3.2  
gi|239746241 PREDICTED: hypothetical protein XP_002343712 [Homo ...    28   3.2  
gi|4885261 growth differentiation factor 9 precursor [Homo sapiens]    28   3.2  
gi|19923615 myosin head domain containing 1 isoform 1 [Homo sapi...    28   3.2  
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]     28   4.1  
gi|4502425 bone morphogenetic protein 6 preproprotein [Homo sapi...    27   5.4  
gi|4759146 slit homolog 2 [Homo sapiens]                               27   5.4  
gi|32880206 cadherin-like 24 isoform 1 [Homo sapiens]                  27   5.4  
gi|169173314 PREDICTED: hypothetical protein LOC286177 [Homo sap...    27   7.0  
gi|169172513 PREDICTED: hypothetical protein LOC286177 [Homo sap...    27   7.0  
gi|169173083 PREDICTED: hypothetical protein LOC286177 [Homo sap...    27   7.0  

>gi|4758974 persephin precursor [Homo sapiens]
          Length = 156

 Score =  327 bits (839), Expect = 2e-90
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MAVGKFLLGSLLLLSLQLGQGWGPDARGVPVADGEFSSEQVAKAGGTWLGTHRPLARLRR 60
           MAVGKFLLGSLLLLSLQLGQGWGPDARGVPVADGEFSSEQVAKAGGTWLGTHRPLARLRR
Sbjct: 1   MAVGKFLLGSLLLLSLQLGQGWGPDARGVPVADGEFSSEQVAKAGGTWLGTHRPLARLRR 60

Query: 61  ALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRGARTQHGLALARLQGQGRAHG 120
           ALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRGARTQHGLALARLQGQGRAHG
Sbjct: 61  ALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRGARTQHGLALARLQGQGRAHG 120

Query: 121 GPCCRPTRYTDVAFLDDRHRWQRLPQLSAAACGCGG 156
           GPCCRPTRYTDVAFLDDRHRWQRLPQLSAAACGCGG
Sbjct: 121 GPCCRPTRYTDVAFLDDRHRWQRLPQLSAAACGCGG 156


>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
          Length = 237

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 56/125 (44%), Positives = 73/125 (58%), Gaps = 16/125 (12%)

Query: 40  QVAKAGGTWLGTHRPLARLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPR 99
           + A+AGG       P +R R A +  C+L S  + V  LGLG+ S+E V FR+C+GSC R
Sbjct: 121 RAARAGG-------PGSRARAAGARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRR 173

Query: 100 GARTQHGLALARLQGQG--------RAHGGPCCRPTRYTDVAFLDDRHRWQRLPQLSAAA 151
            AR+ H L+LA L G G        R    PCCRPTRY  V+F+D    W+ + +LSA A
Sbjct: 174 -ARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYEAVSFMDVNSTWRTVDRLSATA 232

Query: 152 CGCGG 156
           CGC G
Sbjct: 233 CGCLG 237


>gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 56/125 (44%), Positives = 73/125 (58%), Gaps = 16/125 (12%)

Query: 40  QVAKAGGTWLGTHRPLARLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPR 99
           + A+AGG       P +R R A +  C+L S  + V  LGLG+ S+E V FR+C+GSC R
Sbjct: 104 RAARAGG-------PGSRARAAGARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSC-R 155

Query: 100 GARTQHGLALARLQGQG--------RAHGGPCCRPTRYTDVAFLDDRHRWQRLPQLSAAA 151
            AR+ H L+LA L G G        R    PCCRPTRY  V+F+D    W+ + +LSA A
Sbjct: 156 RARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYEAVSFMDVNSTWRTVDRLSATA 215

Query: 152 CGCGG 156
           CGC G
Sbjct: 216 CGCLG 220


>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 56/125 (44%), Positives = 73/125 (58%), Gaps = 16/125 (12%)

Query: 40  QVAKAGGTWLGTHRPLARLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPR 99
           + A+AGG       P +R R A +  C+L S  + V  LGLG+ S+E V FR+C+GSC R
Sbjct: 112 RAARAGG-------PGSRARAAGARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRR 164

Query: 100 GARTQHGLALARLQGQG--------RAHGGPCCRPTRYTDVAFLDDRHRWQRLPQLSAAA 151
            AR+ H L+LA L G G        R    PCCRPTRY  V+F+D    W+ + +LSA A
Sbjct: 165 -ARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYEAVSFMDVNSTWRTVDRLSATA 223

Query: 152 CGCGG 156
           CGC G
Sbjct: 224 CGCLG 228


>gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 56/125 (44%), Positives = 73/125 (58%), Gaps = 16/125 (12%)

Query: 40  QVAKAGGTWLGTHRPLARLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPR 99
           + A+AGG       P +R R A +  C+L S  + V  LGLG+ S+E V FR+C+GSC R
Sbjct: 104 RAARAGG-------PGSRARAAGARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSC-R 155

Query: 100 GARTQHGLALARLQGQG--------RAHGGPCCRPTRYTDVAFLDDRHRWQRLPQLSAAA 151
            AR+ H L+LA L G G        R    PCCRPTRY  V+F+D    W+ + +LSA A
Sbjct: 156 RARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYEAVSFMDVNSTWRTVDRLSATA 215

Query: 152 CGCGG 156
           CGC G
Sbjct: 216 CGCLG 220


>gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 56/125 (44%), Positives = 73/125 (58%), Gaps = 16/125 (12%)

Query: 40  QVAKAGGTWLGTHRPLARLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPR 99
           + A+AGG       P +R R A +  C+L S  + V  LGLG+ S+E V FR+C+GSC R
Sbjct: 112 RAARAGG-------PGSRARAAGARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRR 164

Query: 100 GARTQHGLALARLQGQG--------RAHGGPCCRPTRYTDVAFLDDRHRWQRLPQLSAAA 151
            AR+ H L+LA L G G        R    PCCRPTRY  V+F+D    W+ + +LSA A
Sbjct: 165 -ARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYEAVSFMDVNSTWRTVDRLSATA 223

Query: 152 CGCGG 156
           CGC G
Sbjct: 224 CGCLG 228


>gi|4758826 neurturin preproprotein [Homo sapiens]
          Length = 197

 Score = 88.2 bits (217), Expect = 3e-18
 Identities = 52/109 (47%), Positives = 64/109 (58%), Gaps = 9/109 (8%)

Query: 54  PLARLRRALSG--PCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRGARTQHGLALAR 111
           P  R  RA  G  PC L  L + V+ELGLGYAS+E V+FRYCAG+C   AR  + L L R
Sbjct: 89  PRRRRARARLGARPCGLRELEVRVSELGLGYASDETVLFRYCAGACEAAARV-YDLGLRR 147

Query: 112 LQ-----GQGRAHGGPCCRPTRYTD-VAFLDDRHRWQRLPQLSAAACGC 154
           L+      + R    PCCRPT Y D V+FLD   R+  + +LSA  C C
Sbjct: 148 LRQRRRLRRERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELSARECAC 196


>gi|40549413 glial cell derived neurotrophic factor isoform 3 [Homo
           sapiens]
          Length = 133

 Score = 68.2 bits (165), Expect = 3e-12
 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 57  RLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRGARTQHGLALARLQGQG 116
           R +R  +  C L ++ L+V +LGLGY ++E++IFRYC+GSC   A T +   L  L    
Sbjct: 31  RGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCD-AAETTYDKILKNLSRNR 89

Query: 117 R----AHGGPCCRPTRY-TDVAFLDDRHRWQRLPQLSAAACGC 154
           R      G  CCRP  +  D++FLDD   +  L + SA  CGC
Sbjct: 90  RLVSDKVGQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGC 132


>gi|40549411 glial cell derived neurotrophic factor isoform 2
           precursor [Homo sapiens]
          Length = 185

 Score = 68.2 bits (165), Expect = 3e-12
 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 57  RLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRGARTQHGLALARLQGQG 116
           R +R  +  C L ++ L+V +LGLGY ++E++IFRYC+GSC   A T +   L  L    
Sbjct: 83  RGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCD-AAETTYDKILKNLSRNR 141

Query: 117 R----AHGGPCCRPTRY-TDVAFLDDRHRWQRLPQLSAAACGC 154
           R      G  CCRP  +  D++FLDD   +  L + SA  CGC
Sbjct: 142 RLVSDKVGQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGC 184


>gi|4503975 glial cell derived neurotrophic factor isoform 1
           preproprotein [Homo sapiens]
          Length = 211

 Score = 68.2 bits (165), Expect = 3e-12
 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 57  RLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRGARTQHGLALARLQGQG 116
           R +R  +  C L ++ L+V +LGLGY ++E++IFRYC+GSC   A T +   L  L    
Sbjct: 109 RGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCD-AAETTYDKILKNLSRNR 167

Query: 117 R----AHGGPCCRPTRY-TDVAFLDDRHRWQRLPQLSAAACGC 154
           R      G  CCRP  +  D++FLDD   +  L + SA  CGC
Sbjct: 168 RLVSDKVGQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGC 210


>gi|5031613 growth differentiation factor 11 precursor [Homo
           sapiens]
          Length = 407

 Score = 35.8 bits (81), Expect = 0.015
 Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 66  CQLWSLTLSVAELGLGYA-SEEKVIFRYCAGSCPRGARTQHGLALARLQGQGRAHGGPCC 124
           C  + LT+     G  +  + ++    YC+G C      ++       Q   R   GPCC
Sbjct: 313 CCRYPLTVDFEAFGWDWIIAPKRYKANYCSGQCEYMFMQKYPHTHLVQQANPRGSAGPCC 372

Query: 125 RPTRYT--DVAFLDDRHR--WQRLPQLSAAACGC 154
            PT+ +  ++ + +D+ +  + ++P +    CGC
Sbjct: 373 TPTKMSPINMLYFNDKQQIIYGKIPGMVVDRCGC 406


>gi|4885259 myostatin [Homo sapiens]
          Length = 375

 Score = 33.9 bits (76), Expect = 0.057
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 66  CQLWSLTLSVAELGLGYA-SEEKVIFRYCAGSCPRGARTQHGLALARLQGQGRAHGGPCC 124
           C  + LT+     G  +  + ++    YC+G C      ++       Q   R   GPCC
Sbjct: 281 CCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPRGSAGPCC 340

Query: 125 RPTRYTDVAFL----DDRHRWQRLPQLSAAACGC 154
            PT+ + +  L     ++  + ++P +    CGC
Sbjct: 341 TPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGC 374


>gi|13899247 retbindin isoform 2 [Homo sapiens]
          Length = 261

 Score = 33.1 bits (74), Expect = 0.098
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 88  VIFRYCAGSCPRGARTQHGLALARLQGQGRAH-GGPCC 124
           ++   C GS P  AR+Q    LA   G+G+ H  GPCC
Sbjct: 55  ILLEACGGSRPLQARSQQHHGLAADLGKGKLHLAGPCC 92


>gi|124486584 retbindin isoform 1 [Homo sapiens]
          Length = 229

 Score = 33.1 bits (74), Expect = 0.098
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 88  VIFRYCAGSCPRGARTQHGLALARLQGQGRAH-GGPCC 124
           ++   C GS P  AR+Q    LA   G+G+ H  GPCC
Sbjct: 23  ILLEACGGSRPLQARSQQHHGLAADLGKGKLHLAGPCC 60


>gi|154813204 inhibin beta B subunit preproprotein [Homo sapiens]
          Length = 407

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 13/76 (17%)

Query: 92  YCAGSCPR------GARTQHGLALA---RLQGQGRAHGGPCCRPTRYTDVAFL--DDRHR 140
           YC GSCP       G+ +    A+    R++G        CC PT+ + ++ L  DD + 
Sbjct: 331 YCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGTVNSCCIPTKLSTMSMLYFDDEYN 390

Query: 141 WQR--LPQLSAAACGC 154
             +  +P +    CGC
Sbjct: 391 IVKRDVPNMIVEECGC 406


>gi|5031795 inhibin beta C chain preproprotein [Homo sapiens]
          Length = 352

 Score = 31.2 bits (69), Expect = 0.37
 Identities = 22/83 (26%), Positives = 28/83 (33%), Gaps = 14/83 (16%)

Query: 86  EKVIFRYCAGSCPRGARTQHGLA----------LARLQGQGRAHGGPCCRPTRYTDVAFL 135
           E     +C G CP       G+A          L      G   GG CC PT    ++ L
Sbjct: 269 EGYAMNFCIGQCPLHIAGMPGIAASFHTAVLNLLKANTAAGTTGGGSCCVPTARRPLSLL 328

Query: 136 ----DDRHRWQRLPQLSAAACGC 154
               D       +P +   ACGC
Sbjct: 329 YYDRDSNIVKTDIPDMVVEACGC 351


>gi|42475941 zinc finger protein 261 [Homo sapiens]
          Length = 1370

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 16/61 (26%)

Query: 37  SSEQVAKAGGTWLGTHRPLARLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGS 96
           +S +V +AG T  G  RP +  RR+LS PC               Y   ++ ++++C+ S
Sbjct: 530 TSYKVKQAGLT--GPPRPCSFCRRSLSDPCY--------------YNKVDRTVYQFCSPS 573

Query: 97  C 97
           C
Sbjct: 574 C 574


>gi|4827067 zinc finger protein 261 [Homo sapiens]
          Length = 1370

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 16/61 (26%)

Query: 37  SSEQVAKAGGTWLGTHRPLARLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGS 96
           +S +V +AG T  G  RP +  RR+LS PC               Y   ++ ++++C+ S
Sbjct: 530 TSYKVKQAGLT--GPPRPCSFCRRSLSDPCY--------------YNKVDRTVYQFCSPS 573

Query: 97  C 97
           C
Sbjct: 574 C 574


>gi|239757232 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 461

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 12/27 (44%), Positives = 13/27 (48%)

Query: 98  PRGARTQHGLALARLQGQGRAHGGPCC 124
           PRG R   GL L  + GQ R    P C
Sbjct: 412 PRGTRRARGLQLRPVGGQSRREAAPAC 438


>gi|239751740 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 461

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 12/27 (44%), Positives = 13/27 (48%)

Query: 98  PRGARTQHGLALARLQGQGRAHGGPCC 124
           PRG R   GL L  + GQ R    P C
Sbjct: 412 PRGTRRARGLQLRPVGGQSRREAAPAC 438


>gi|239746241 PREDICTED: hypothetical protein XP_002343712 [Homo
           sapiens]
          Length = 461

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 12/27 (44%), Positives = 13/27 (48%)

Query: 98  PRGARTQHGLALARLQGQGRAHGGPCC 124
           PRG R   GL L  + GQ R    P C
Sbjct: 412 PRGTRRARGLQLRPVGGQSRREAAPAC 438


>gi|4885261 growth differentiation factor 9 precursor [Homo sapiens]
          Length = 454

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 12/101 (11%)

Query: 66  CQLWSLTLSVAELGLG--YASEEKVIFRYCAGSCPRGARTQHGLALARL------QGQGR 117
           C+L    LS ++L       +  +   RYC G CPR    ++G  +  +      +    
Sbjct: 353 CELHDFRLSFSQLKWDNWIVAPHRYNPRYCKGDCPRAVGHRYGSPVHTMVQNIIYEKLDS 412

Query: 118 AHGGPCCRPTRYTDVAFL----DDRHRWQRLPQLSAAACGC 154
           +   P C P +Y+ ++ L    D    ++    + A  C C
Sbjct: 413 SVPRPSCVPAKYSPLSVLTIEPDGSIAYKEYEDMIATKCTC 453


>gi|19923615 myosin head domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 770

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 9/82 (10%)

Query: 60  RALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRG---------ARTQHGLALA 110
           R L    +LW L L +A   +G  S ++ +  +     PRG         A+ Q G+   
Sbjct: 655 RLLEAIIRLWPLGLVLANTAMGVGSFQRKLVVWACLQLPRGSPSSYTVQTAQDQAGVTSI 714

Query: 111 RLQGQGRAHGGPCCRPTRYTDV 132
           R   QG         P RY D+
Sbjct: 715 RALPQGSIKFHCRKSPLRYADI 736


>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
          Length = 1669

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 9/46 (19%)

Query: 97   CPRGART-QHGLALARLQGQGRAHG------GPCCRPTRYTDVAFL 135
            CP G +   HG +L  +QG  RAHG      G C R  +++ + FL
Sbjct: 1460 CPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLR--KFSTMPFL 1503


>gi|4502425 bone morphogenetic protein 6 preproprotein [Homo
           sapiens]
          Length = 513

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 24/111 (21%)

Query: 62  LSGPCQLWSLTLSVAELGL--------GYASEEKVIFRYCAGSC--PRGAR---TQHGLA 108
           L   C+   L +S  +LG         GYA+       YC G C  P  A    T H + 
Sbjct: 408 LKTACRKHELYVSFQDLGWQDWIIAPKGYAAN------YCDGECSFPLNAHMNATNHAIV 461

Query: 109 LARLQGQGRAH-GGPCCRPTRYT--DVAFLDDRHR--WQRLPQLSAAACGC 154
              +      +   PCC PT+     V + DD      ++   +   ACGC
Sbjct: 462 QTLVHLMNPEYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMVVRACGC 512


>gi|4759146 slit homolog 2 [Homo sapiens]
          Length = 1529

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 8/73 (10%)

Query: 64   GPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRGA-RTQHGLA-------LARLQGQ 115
            G C+L  L     E   GY  +       C G   R   + Q G A       ++RL+ +
Sbjct: 1424 GKCRLSGLGQPYCECSSGYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECR 1483

Query: 116  GRAHGGPCCRPTR 128
            G   GG CC P R
Sbjct: 1484 GGCAGGQCCGPLR 1496


>gi|32880206 cadherin-like 24 isoform 1 [Homo sapiens]
          Length = 819

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 10  SLLLLSLQLGQGWGPDARGVPVADGEFSS 38
           +L +L+ +LG  WGP+   VP+   E+S+
Sbjct: 446 NLTVLATELGWSWGPERGWVPLLVAEWSA 474


>gi|169173314 PREDICTED: hypothetical protein LOC286177 [Homo
           sapiens]
          Length = 287

 Score = 26.9 bits (58), Expect = 7.0
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 96  SCPRGA--RTQHGLALARLQGQGRAHGGPCCRPTRYTDVAFLDDRHRWQRLPQLSAAACG 153
           SC +G   + Q  L L R +GQ   +    CR  R      L++  RW   P     A G
Sbjct: 181 SCVQGNAWKLQRSLLLKR-KGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAWG 239

Query: 154 CG 155
            G
Sbjct: 240 VG 241


>gi|169172513 PREDICTED: hypothetical protein LOC286177 [Homo
           sapiens]
          Length = 282

 Score = 26.9 bits (58), Expect = 7.0
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 96  SCPRGA--RTQHGLALARLQGQGRAHGGPCCRPTRYTDVAFLDDRHRWQRLPQLSAAACG 153
           SC +G   + Q  L L R +GQ   +    CR  R      L++  RW   P     A G
Sbjct: 176 SCVQGNAWKLQRSLLLKR-KGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAWG 234

Query: 154 CG 155
            G
Sbjct: 235 VG 236


>gi|169173083 PREDICTED: hypothetical protein LOC286177 [Homo
           sapiens]
          Length = 282

 Score = 26.9 bits (58), Expect = 7.0
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 96  SCPRGA--RTQHGLALARLQGQGRAHGGPCCRPTRYTDVAFLDDRHRWQRLPQLSAAACG 153
           SC +G   + Q  L L R +GQ   +    CR  R      L++  RW   P     A G
Sbjct: 176 SCVQGNAWKLQRSLLLKR-KGQSETYKKNMCRELRAVGWGLLEEVGRWGEAPPSELGAWG 234

Query: 154 CG 155
            G
Sbjct: 235 VG 236


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.139    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,641,467
Number of Sequences: 37866
Number of extensions: 301311
Number of successful extensions: 750
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 717
Number of HSP's gapped (non-prelim): 40
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.