RPGRIP1 993

Name: RPGRIP1	Sequence: fasta or formatted (1286aa)		NCBI GI: 112734867
Description: retinitis pigmentosa GTPase regulator interacting protein 1		Referenced in: Crystallins and Other Eye Proteins Planar Cell Polarity Ran and Rag
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 83 3 C cysteine 1.0 13 2 D aspartate 5.5 71 2 E glutamate 10.6 136 4 F phenylalanine 3.0 39 2 G glycine 4.0 52 2 H histidine 3.1 40 1 I isoleucine 3.9 50 2 K lysine 7.0 90 2 L leucine 11.0 142 2 M methionine 2.2 28 2 N asparagine 3.3 43 2 P proline 5.8 75 2 Q glutamine 6.5 83 3 R arginine 5.6 72 3 S serine 8.1 104 3 T threonine 4.5 58 2 V valine 5.1 65 2 W tryptophan 0.9 12 1 Y tyrosine 2.3 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinitis pigmentosa GTPase regulator interacting p... RPGRIP1L 0.238 RPGRIP1-like isoform b RPGRIP1L 0.231 RPGRIP1-like isoform a AKAP9 0.018 A-kinase anchor protein 9 isoform 3 MYH9 0.017 myosin, heavy polypeptide 9, non-muscle MYH15 0.017 myosin, heavy polypeptide 15 EEA1 0.016 early endosome antigen 1, 162kD GOLGA4 0.016 golgi autoantigen, golgin subfamily a, 4 AKAP9 0.016 A-kinase anchor protein 9 isoform 2 CCDC147 0.016 coiled-coil domain containing 147 ZNF853 0.016 zinc finger protein 853 CLIP1 0.016 restin isoform b CLIP1 0.016 restin isoform a RUFY2 0.016 RUN and FYVE domain-containing 2 isoform a GCC2 0.015 GRIP and coiled-coil domain-containing 2 CCDC88A 0.015 coiled-coil domain containing 88A isoform 2 CCDC88A 0.015 coiled-coil domain containing 88A isoform 1 PPL 0.015 periplakin CCDC18 0.015 sarcoma antigen NY-SAR-41 CEP250 0.015 centrosomal protein 2 MYH11 0.015 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.015 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.015 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.015 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... HMMR 0.015 hyaluronan-mediated motility receptor isoform d [Ho... HMMR 0.015 hyaluronan-mediated motility receptor isoform a [Ho... HMMR 0.015 hyaluronan-mediated motility receptor isoform c [Ho... HMMR 0.015 hyaluronan-mediated motility receptor isoform b [Ho... FAM184A 0.015 hypothetical protein LOC79632 isoform 1 FAM184A 0.014 hypothetical protein LOC79632 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.