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Search of human proteins with 4757962
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4757962 cyclin-dependent kinase inhibitor 1B [Homo sapiens]
(198 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4757962 cyclin-dependent kinase inhibitor 1B [Homo sapiens] 414 e-116
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 75 4e-14
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 75 4e-14
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 75 4e-14
gi|11386203 cyclin-dependent kinase inhibitor 1A [Homo sapiens] 65 4e-11
gi|17978495 cyclin-dependent kinase inhibitor 1A [Homo sapiens] 65 4e-11
gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo sap... 33 0.12
gi|239755855 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|239750363 PREDICTED: hypothetical protein XP_002347382 [Homo ... 33 0.16
gi|239744667 PREDICTED: hypothetical protein XP_002343220 [Homo ... 33 0.16
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 32 0.27
gi|4506321 protein tyrosine phosphatase, receptor type, N precur... 32 0.27
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 32 0.35
gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens] 32 0.46
gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens] 32 0.46
gi|63054872 ladybird homeobox 1 [Homo sapiens] 32 0.46
gi|7661950 SH2 domain binding protein 1 [Homo sapiens] 32 0.46
gi|33286446 opioid growth factor receptor [Homo sapiens] 31 0.79
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 31 0.79
gi|169234719 lin-54 homolog isoform a [Homo sapiens] 31 0.79
gi|45439357 elongin A2 [Homo sapiens] 31 0.79
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 30 1.0
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 30 1.0
gi|29825823 hypothetical protein LOC283987 [Homo sapiens] 30 1.0
gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sap... 30 1.3
gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sap... 30 1.3
gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo sap... 30 1.3
gi|21328446 hormone-sensitive lipase [Homo sapiens] 29 2.3
gi|239582720 ATG9 autophagy related 9 homolog B [Homo sapiens] 29 2.3
gi|154689866 hypothetical protein LOC9778 [Homo sapiens] 29 2.3
>gi|4757962 cyclin-dependent kinase inhibitor 1B [Homo sapiens]
Length = 198
Score = 414 bits (1064), Expect = e-116
Identities = 198/198 (100%), Positives = 198/198 (100%)
Query: 1 MSNVRVSNGSPSLERMDARQAEHPKPSACRNLFGPVDHEELTRDLEKHCRDMEEASQRKW 60
MSNVRVSNGSPSLERMDARQAEHPKPSACRNLFGPVDHEELTRDLEKHCRDMEEASQRKW
Sbjct: 1 MSNVRVSNGSPSLERMDARQAEHPKPSACRNLFGPVDHEELTRDLEKHCRDMEEASQRKW 60
Query: 61 NFDFQNHKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLIG 120
NFDFQNHKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLIG
Sbjct: 61 NFDFQNHKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLIG 120
Query: 121 APANSEDTHLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPN 180
APANSEDTHLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPN
Sbjct: 121 APANSEDTHLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPN 180
Query: 181 AGSVEQTPKKPGLRRRQT 198
AGSVEQTPKKPGLRRRQT
Sbjct: 181 AGSVEQTPKKPGLRRRQT 198
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 75.1 bits (183), Expect = 4e-14
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 19/118 (16%)
Query: 25 KPSACRNLFGPVDHEELTRDLEKHCRDMEEASQRKWNFDFQNHKPLE--GKYEWQEVEKG 82
+ SACR+LFGPVDHEEL+R+L+ ++ Q +W++DFQ PL G+ +W EV+
Sbjct: 15 RTSACRSLFGPVDHEELSRELQARLAELNAEDQNRWDYDFQQDMPLRGPGRLQWTEVDSD 74
Query: 83 SLPEFYYR-----------PPRPPKGACKV-----PAQESQDVSGSRP-AAPLIGAPA 123
S+P FY PRP A V PA ES D P P + PA
Sbjct: 75 SVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPA 132
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 75.1 bits (183), Expect = 4e-14
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 19/118 (16%)
Query: 25 KPSACRNLFGPVDHEELTRDLEKHCRDMEEASQRKWNFDFQNHKPLE--GKYEWQEVEKG 82
+ SACR+LFGPVDHEEL+R+L+ ++ Q +W++DFQ PL G+ +W EV+
Sbjct: 15 RTSACRSLFGPVDHEELSRELQARLAELNAEDQNRWDYDFQQDMPLRGPGRLQWTEVDSD 74
Query: 83 SLPEFYYR-----------PPRPPKGACKV-----PAQESQDVSGSRP-AAPLIGAPA 123
S+P FY PRP A V PA ES D P P + PA
Sbjct: 75 SVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPA 132
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 75.1 bits (183), Expect = 4e-14
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 19/118 (16%)
Query: 25 KPSACRNLFGPVDHEELTRDLEKHCRDMEEASQRKWNFDFQNHKPLE--GKYEWQEVEKG 82
+ SACR+LFGPVDHEEL+R+L+ ++ Q +W++DFQ PL G+ +W EV+
Sbjct: 26 RTSACRSLFGPVDHEELSRELQARLAELNAEDQNRWDYDFQQDMPLRGPGRLQWTEVDSD 85
Query: 83 SLPEFYYR-----------PPRPPKGACKV-----PAQESQDVSGSRP-AAPLIGAPA 123
S+P FY PRP A V PA ES D P P + PA
Sbjct: 86 SVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPA 143
>gi|11386203 cyclin-dependent kinase inhibitor 1A [Homo sapiens]
Length = 164
Score = 65.1 bits (157), Expect = 4e-11
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 28 ACRNLFGPVDHEELTRDLEKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVEKGSLPEF 87
ACR LFGPVD E+L+RD + + ++ +WNFDF PLEG + W+ V LP+
Sbjct: 17 ACRRLFGPVDSEQLSRDCDALMAGCIQEARERWNFDFVTETPLEGDFAWERVRGLGLPKL 76
Query: 88 YYRPPRPPKG 97
Y P P +G
Sbjct: 77 YL-PTGPRRG 85
>gi|17978495 cyclin-dependent kinase inhibitor 1A [Homo sapiens]
Length = 164
Score = 65.1 bits (157), Expect = 4e-11
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 28 ACRNLFGPVDHEELTRDLEKHCRDMEEASQRKWNFDFQNHKPLEGKYEWQEVEKGSLPEF 87
ACR LFGPVD E+L+RD + + ++ +WNFDF PLEG + W+ V LP+
Sbjct: 17 ACRRLFGPVDSEQLSRDCDALMAGCIQEARERWNFDFVTETPLEGDFAWERVRGLGLPKL 76
Query: 88 YYRPPRPPKG 97
Y P P +G
Sbjct: 77 YL-PTGPRRG 85
>gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo
sapiens]
Length = 501
Score = 33.5 bits (75), Expect = 0.12
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 87 FYYRPPRPPKGACKVPAQESQDVSGSRPAAPLIGAPANSEDTHLVDPKTDPSDSQTGLAE 146
F R +P GA P +E+Q +G++ P + A+ DP+ DP+D G +
Sbjct: 56 FGARCRQPHPGAPAPPGREAQPEAGAKK--PPLRTAADVIQRIRWDPRLDPADFSVGYVD 113
Query: 147 QCAGIRKRP 155
+ G+R+ P
Sbjct: 114 RFLGVREEP 122
>gi|239755855 PREDICTED: hypothetical protein [Homo sapiens]
Length = 250
Score = 33.1 bits (74), Expect = 0.16
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 97 GACKVPAQESQDVSGSRPAAPLIGA---PANSEDTHLVDPKTDPSDSQTGLAEQCAGIRK 153
G ++ +QE + + + PA L GA P S DT D T+P E C G
Sbjct: 24 GEARLESQEEETIPAAPPAPRLRGAAERPRRSRDTWDGDEDTEPG-------EACGGRTS 76
Query: 154 RPATDDSSTQNKRANRTEENVSDG 177
R A+ S N+ + TEE + G
Sbjct: 77 RTASLVSGLLNELYSCTEEEEAAG 100
>gi|239750363 PREDICTED: hypothetical protein XP_002347382 [Homo
sapiens]
Length = 250
Score = 33.1 bits (74), Expect = 0.16
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 97 GACKVPAQESQDVSGSRPAAPLIGA---PANSEDTHLVDPKTDPSDSQTGLAEQCAGIRK 153
G ++ +QE + + + PA L GA P S DT D T+P E C G
Sbjct: 24 GEARLESQEEETIPAAPPAPRLRGAAERPRRSRDTWDGDEDTEPG-------EACGGRTS 76
Query: 154 RPATDDSSTQNKRANRTEENVSDG 177
R A+ S N+ + TEE + G
Sbjct: 77 RTASLVSGLLNELYSCTEEEEAAG 100
>gi|239744667 PREDICTED: hypothetical protein XP_002343220 [Homo
sapiens]
Length = 250
Score = 33.1 bits (74), Expect = 0.16
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 97 GACKVPAQESQDVSGSRPAAPLIGA---PANSEDTHLVDPKTDPSDSQTGLAEQCAGIRK 153
G ++ +QE + + + PA L GA P S DT D T+P E C G
Sbjct: 24 GEARLESQEEETIPAAPPAPRLRGAAERPRRSRDTWDGDEDTEPG-------EACGGRTS 76
Query: 154 RPATDDSSTQNKRANRTEENVSDG 177
R A+ S N+ + TEE + G
Sbjct: 77 RTASLVSGLLNELYSCTEEEEAAG 100
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 32.3 bits (72), Expect = 0.27
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 70 LEGKYEWQEVEKGSLPEFYYR---------PPRPPK-------GACKVPAQESQDVSGSR 113
L G +E++E + S PE PP P K + + + SG+R
Sbjct: 248 LGGDFEYEESLRTSQPEEKKDVSLDSDAAGPPTPCKPSSPGADSSLSSAVGKGRQGSGAR 307
Query: 114 PAAPLIGAPANSEDT---HLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRT 170
P P SE +LV PK DP+ S+ A + + A +D+ + +R
Sbjct: 308 PGLPEKEENEKSEPKICRNLVTPKADPTGSEPAKASE------KEAPEDTVDAGEEGSRR 361
Query: 171 EENVSDGSPNAGSVEQ 186
EE + A ++E+
Sbjct: 362 EEAAKEPKKKASALEE 377
>gi|4506321 protein tyrosine phosphatase, receptor type, N precursor
[Homo sapiens]
Length = 979
Score = 32.3 bits (72), Expect = 0.27
Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 18/118 (15%)
Query: 72 GKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLIGAPANSEDTHLV 131
G+ Q++ GS P +R P+PP G A S + PL+ HL+
Sbjct: 138 GELLLQDIPTGSAPAAQHRLPQPPVGKGGAGASSSLSPLQAELLPPLL--------EHLL 189
Query: 132 DPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPNAGSVEQTPK 189
P P S + PA ++ +R VS+GSP SV PK
Sbjct: 190 LPPQPPHPS----------LSYEPALLQPYLFHQFGSRDGSRVSEGSPGMVSVGPLPK 237
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 32.0 bits (71), Expect = 0.35
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Query: 90 RPPRP------PKGACKVPAQESQDV---SGSRPAAP-LIGAPANSEDTHLVDPKTDPSD 139
RPP P P GA P++ + V S S P AP L+ P E + T+P D
Sbjct: 84 RPPEPEPAPFGPPGAAAQPSKPTSTVLPRSASAPGAPPLVRVPRPVEPPGDLGLPTEPQD 143
Query: 140 SQTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSP 179
+ G A + A + D + A TE +D +P
Sbjct: 144 TPGGPASEPAQPPGERSADPPLPALELAQATERPSADAAP 183
>gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 31.6 bits (70), Expect = 0.46
Identities = 27/120 (22%), Positives = 38/120 (31%), Gaps = 15/120 (12%)
Query: 84 LPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLI---------------GAPANSEDT 128
L E R P P + P Q + + P P G+PA ED
Sbjct: 11 LREMLERWPLPAAPPSRTPPQTLKHLPSGEPGPPFPAGMPGGGSGSDTKGGGSPATPEDP 70
Query: 129 HLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPNAGSVEQTP 188
P D Q + +RP T D A + + G+P+ G V + P
Sbjct: 71 RSPAKPAAPEDPQMPAQPALPQLPRRPRTLDEDGAAGEAGPVSKAAAGGAPHIGFVGEPP 130
>gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 31.6 bits (70), Expect = 0.46
Identities = 27/120 (22%), Positives = 38/120 (31%), Gaps = 15/120 (12%)
Query: 84 LPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLI---------------GAPANSEDT 128
L E R P P + P Q + + P P G+PA ED
Sbjct: 11 LREMLERWPLPAAPPSRTPPQTLKHLPSGEPGPPFPAGMPGGGSGSDTKGGGSPATPEDP 70
Query: 129 HLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPNAGSVEQTP 188
P D Q + +RP T D A + + G+P+ G V + P
Sbjct: 71 RSPAKPAAPEDPQMPAQPALPQLPRRPRTLDEDGAAGEAGPVSKAAAGGAPHIGFVGEPP 130
>gi|63054872 ladybird homeobox 1 [Homo sapiens]
Length = 281
Score = 31.6 bits (70), Expect = 0.46
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 40 ELTRDLEKHCRDMEEASQR--KWNFDFQNHKPLEGKYEWQEVEKGSLPEFYYRPPRP--P 95
+L RDLE+ D+E A + D LE E G RP P P
Sbjct: 179 KLKRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEATAGGGGGCGRAKSRPGSPVLP 238
Query: 96 KGACKVPAQESQDVSGSRPAAPLIGAPANSED 127
GA K P + +S PA+PL PA+S+D
Sbjct: 239 PGAPKAPGAGALQLS---PASPLTDQPASSQD 267
>gi|7661950 SH2 domain binding protein 1 [Homo sapiens]
Length = 1173
Score = 31.6 bits (70), Expect = 0.46
Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 16/145 (11%)
Query: 53 EEASQRKWNFDFQNHKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGS 112
EE +RK ++ K EG + E E G P+ RPP+ K P + + G
Sbjct: 950 EEGGERKKKKRRRHPKGEEGSDD-DETENGPKPK-KRRPPKAEKKKAPKPERLPPSMKGK 1007
Query: 113 RPAAPLIGAPANS--EDTHLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRT 170
+ +I + +S ED + + P +S + + D Q K+ +
Sbjct: 1008 IKSKAIISSSDDSSDEDKLKIADEGHPRNSNSN------------SDSDEDEQRKKCASS 1055
Query: 171 EENVSDGSPNAGSVEQTPKKPGLRR 195
E + + +GS +P++P +R
Sbjct: 1056 ESDSDENQNKSGSEAGSPRRPRRQR 1080
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 30.8 bits (68), Expect = 0.79
Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 13/75 (17%)
Query: 92 PRPPKGACKVPAQESQDVSGSRPAAPLIGAPANSEDTHLVDPKTDPSDSQTGLAEQCAGI 151
PRP A PA+ + G RPA P PA S P P S G
Sbjct: 544 PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAES-------PSETPGPSPAG------PT 590
Query: 152 RKRPATDDSSTQNKR 166
R PA S T R
Sbjct: 591 RDEPAESPSETPGPR 605
Score = 29.3 bits (64), Expect = 2.3
Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 14/88 (15%)
Query: 92 PRPPKGACKVPAQESQDVSGSRPAAPLIGAPANSEDTHLVDPKTDPSDSQTGLAEQCAGI 151
PRP A PA+ + G RPA P PA S P P S G
Sbjct: 604 PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAES-------PSETPGPSPAG------PT 650
Query: 152 RKRPATDDSSTQNKRANRTEENVSDGSP 179
R PA + + + A E + G P
Sbjct: 651 RDEPAKAGEAAELQDA-EVESSAKSGKP 677
>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
Length = 1597
Score = 30.8 bits (68), Expect = 0.79
Identities = 34/115 (29%), Positives = 44/115 (38%), Gaps = 15/115 (13%)
Query: 91 PPRPPKGACKVPAQESQDVSGSRPAAPLIGAPANSEDTHLVDPKT--------DPSDSQT 142
PPR P A PA+ S A P + P P+T DP S
Sbjct: 511 PPRTPDSAPPSPAEAYPITPASVSARPPVAFPRRETSCAARAPETASAPLSMDDP--SPC 568
Query: 143 GLAEQC-AGIRKRPATDDSSTQNKRANRT---EENVSDGSPNAGSVEQTPKKPGL 193
G +E C A + P+T +S AN T + SD P + EQTP G+
Sbjct: 569 GTSEMCPAALYGFPST-GTSPPRPPANSTGTVQHLRSDSFPGSHRTEQTPDLVGM 622
>gi|169234719 lin-54 homolog isoform a [Homo sapiens]
Length = 749
Score = 30.8 bits (68), Expect = 0.79
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 84 LPEFYYRPPRPPKGACKVPAQESQDVS-GSRPAA-PLIGAPANSEDTHLVDPKTDPSDSQ 141
LP+ + G K+P Q+ + V+ G RP P+IG A + + L++ T PS Q
Sbjct: 161 LPQAQKVTTQAQSGDAKLPPQQIKVVTIGGRPEVKPVIGVSALTPGSQLINTTTQPSVLQ 220
Query: 142 TGLAEQCAGIRKRPATDDS 160
T + I K+P T S
Sbjct: 221 TQQL-KTVQIAKKPRTPTS 238
>gi|45439357 elongin A2 [Homo sapiens]
Length = 753
Score = 30.8 bits (68), Expect = 0.79
Identities = 16/78 (20%), Positives = 34/78 (43%)
Query: 113 RPAAPLIGAPANSEDTHLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRTEE 172
R P + + A++ D D KTD Q G ++ + + P + Q+ +N+
Sbjct: 259 REETPRMPSWASARDRQPSDFKTDKEGGQAGSGQRVPALEEAPDSHQKRPQHSHSNKKRP 318
Query: 173 NVSDGSPNAGSVEQTPKK 190
++ P G+ +P++
Sbjct: 319 SLDGRDPGNGTHGLSPEE 336
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 30.4 bits (67), Expect = 1.0
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 114 PAAPLIGAPANSEDTHLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKR--ANRTE 171
P+ LIG + LV + +D T +A +G++KRP + + +NK+ + T
Sbjct: 3181 PSGLLIGVQPPPDPQLLVSESSQRTDLSTTVATPSSGLKKRPISRLQTRKNKKLAPSSTP 3240
Query: 172 ENV--SDGSPNAGSVEQTPKK 190
N+ SD N + TP +
Sbjct: 3241 SNIAPSDVVSNMTLINFTPSQ 3261
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 30.4 bits (67), Expect = 1.0
Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 10/104 (9%)
Query: 94 PPKGACKVPAQESQDVSGSRPAAPL----IGAPANSEDTHLVDPKTDPSDSQTGLAEQ-- 147
PP+G P Q Q ++PA P +G P + + + +QTG+ +
Sbjct: 3345 PPEGEPLQPPQPVQSTQPAQPAPPCPPSQLGQPGQPPSSKMPQVSQEAKGTQTGVEQPRL 3404
Query: 148 CAGIRKRPATDDSSTQNKRANRTEENVSDGSPNAGSVEQTPKKP 191
AG RP + Q +A E P+ SV P P
Sbjct: 3405 PAGPANRPPEPHTQVQRAQA----ETGPTSFPSPVSVSMKPDLP 3444
>gi|29825823 hypothetical protein LOC283987 [Homo sapiens]
Length = 788
Score = 30.4 bits (67), Expect = 1.0
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 15/97 (15%)
Query: 90 RPPRPPKGACKVPAQESQDVSGSRPAAPLIGAPANSEDTHLVDPKTDPSDSQTGLAEQCA 149
R R P+ + +QE + GSRPAAP P + + + P D
Sbjct: 580 RRRRTPEPLSRTGSQEGTSMEGSRPAAP--AEPGTLKTSLVATPGIDK------------ 625
Query: 150 GIRKRPATDDSSTQNKRANRTEENVSDGSPNAGSVEQ 186
+ ++ + T ++++ DGSP G Q
Sbjct: 626 -LTEKSQVSEDGTLRSLEPEPQQSLEDGSPAKGEPSQ 661
>gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 30.0 bits (66), Expect = 1.3
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 10/75 (13%)
Query: 67 HKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLI--GAPAN 124
H G Q V P F + PPRPP G+ PA RP P + P
Sbjct: 225 HATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWT------PRPTGPDLDTALPGT 278
Query: 125 SEDTHLVDPKTDPSD 139
+ED ++P+ P D
Sbjct: 279 AEDA--LEPEAGPED 291
>gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 30.0 bits (66), Expect = 1.3
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 10/75 (13%)
Query: 67 HKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLI--GAPAN 124
H G Q V P F + PPRPP G+ PA RP P + P
Sbjct: 225 HATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWT------PRPTGPDLDTALPGT 278
Query: 125 SEDTHLVDPKTDPSD 139
+ED ++P+ P D
Sbjct: 279 AEDA--LEPEAGPED 291
>gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 30.0 bits (66), Expect = 1.3
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 10/75 (13%)
Query: 67 HKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLI--GAPAN 124
H G Q V P F + PPRPP G+ PA RP P + P
Sbjct: 225 HATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWT------PRPTGPDLDTALPGT 278
Query: 125 SEDTHLVDPKTDPSD 139
+ED ++P+ P D
Sbjct: 279 AEDA--LEPEAGPED 291
>gi|21328446 hormone-sensitive lipase [Homo sapiens]
Length = 1076
Score = 29.3 bits (64), Expect = 2.3
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 8/120 (6%)
Query: 85 PEFYYRP-----PRPPKGACKVPAQESQDVSGSRPAAPLIGAPANSEDT---HLVDPKTD 136
PE + RP P P K P ++ S ++ P ++T H + + +
Sbjct: 15 PEPHQRPITPLEPGPEKTPIAQPESKTLQGSNTQQKPASNQRPLTQQETPAQHDAESQKE 74
Query: 137 PSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPNAGSVEQTPKKPGLRRR 196
P Q +++ ++PA S + +E S P G T ++P LR+R
Sbjct: 75 PRAQQKSASQEEFLAPQKPAPQQSPYIQRVLLTQQEAASQQGPGLGKESITQQEPALRQR 134
>gi|239582720 ATG9 autophagy related 9 homolog B [Homo sapiens]
Length = 924
Score = 29.3 bits (64), Expect = 2.3
Identities = 28/119 (23%), Positives = 42/119 (35%), Gaps = 14/119 (11%)
Query: 76 WQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLIGAPANSEDTHLVDPKT 135
W ++ GS+P P PP +C+ P + PA +P++ P
Sbjct: 17 WGDLGPGSVPLLPMPLPPPPPPSCRGPGGGRISIFSLSPAPHTRSSPSS-----FSPPTA 71
Query: 136 DPSDS---QTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPNAGSVEQTPKKP 191
P S TG ++ C PAT + Q + SP+ GS P P
Sbjct: 72 GPPCSVLQGTGASQSCHSALPIPATPPTQAQ------PAMTPASASPSWGSHSTPPLAP 124
>gi|154689866 hypothetical protein LOC9778 [Homo sapiens]
Length = 1395
Score = 29.3 bits (64), Expect = 2.3
Identities = 43/168 (25%), Positives = 64/168 (38%), Gaps = 30/168 (17%)
Query: 39 EELTRDLEKHCRDMEEASQRKWNFDFQNHKPLEG----KYEWQEVEKGSLPEFYYR--PP 92
E L +L +D++ + K HK LEG + E K + E YY PP
Sbjct: 128 ETLVEELCSRLKDLQSKQEEKI------HKKLEGSPSPEAELSPPAKDQV-EMYYEAFPP 180
Query: 93 RPPKGACK---VPAQESQDVSGSRPAAPLIGAPANSEDTHLVDPKTDPSDSQTGLAEQCA 149
K C + V ++ AP S DT PK S+S+ E+ +
Sbjct: 181 LSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTS--SPKDCNSESEV-TKERSS 237
Query: 150 GIRKRPATDDSSTQNKRANRTEENVSDGSPNAGSVEQTPKKPGLRRRQ 197
+ P T TQ+K N E S+G+ +KP L ++Q
Sbjct: 238 EV---PTTVHEKTQSKSKNEKENKFSNGT--------IEEKPALYKKQ 274
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,878,382
Number of Sequences: 37866
Number of extensions: 535481
Number of successful extensions: 1719
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 1639
Number of HSP's gapped (non-prelim): 143
length of query: 198
length of database: 18,247,518
effective HSP length: 97
effective length of query: 101
effective length of database: 14,574,516
effective search space: 1472026116
effective search space used: 1472026116
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.