Guide to the Human Genome
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Name: CHCHD10 Sequence: fasta or formatted (142aa) NCBI GI: 47497976
Description:

coiled-coil-helix-coiled-coil-helix domain containing 10

Referenced in:

Coiled-Coil Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.3         26           3
 C cysteine            2.8          4           1
 D aspartate           1.4          2           1
 E glutamate           2.8          4           1
 F phenylalanine       2.1          3           1
 G glycine             9.2         13           2
 H histidine           2.8          4           1
 I isoleucine          0.7          1           1
 K lysine              1.4          2           1
 L leucine             6.3          9           1
 M methionine          3.5          5           1
 N asparagine          0.0          0           0
 P proline            14.8         21           3
 Q glutamine           7.0         10           2
 R arginine            3.5          5           1
 S serine             13.4         19           2
 T threonine           4.2          6           2
 V valine              3.5          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.1          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil-helix-coiled-coil-helix domain containin... 
CHCHD2                0.481   coiled-coil-helix-coiled-coil-helix domain containing...
LOC645317             0.451   PREDICTED: similar to coiled-coil-helix-coiled-coil...
LOC645317             0.451   PREDICTED: similar to coiled-coil-helix-coiled-coil...
LOC645317             0.451   PREDICTED: similar to coiled-coil-helix-coiled-coil...
TAF4                  0.094   TBP-associated factor 4 
BAT2                  0.090   HLA-B associated transcript-2 
SALL3                 0.090   sal-like 3 
BAHCC1                0.086   BAH domain and coiled-coil containing 1 
KRTAP4-6              0.075   PREDICTED: keratin associated protein 4.6 
EIF3F                 0.075   eukaryotic translation initiation factor 3, subunit 5...
NACA                  0.071   nascent polypeptide-associated complex alpha subuni...
RPH3A                 0.071   rabphilin 3A homolog isoform 1 
RPH3A                 0.071   rabphilin 3A homolog isoform 2 
RICH2                 0.064   Rho GTPase-activating protein RICH2 
SHANK1                0.060   SH3 and multiple ankyrin repeat domains 1 
RANBP9                0.060   RAN binding protein 9 
SYN1                  0.060   synapsin I isoform Ia 
SYN1                  0.060   synapsin I isoform Ib 
KLF16                 0.056   BTE-binding protein 4 
AMOT                  0.056   angiomotin isoform 2 
AMOT                  0.056   angiomotin isoform 1 
FLJ22184              0.056   PREDICTED: hypothetical protein FLJ22184 
RAPH1                 0.056   Ras association and pleckstrin homology domains 1 is...
NKX6-1                0.056   NK6 transcription factor related, locus 1 
WIPF1                 0.053   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.053   WAS/WASL interacting protein family, member 1 
KIF13B                0.053   kinesin family member 13B 
CASKIN1               0.053   CASK interacting protein 1 
FLJ22184              0.053   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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