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Search of human proteins with 47078238
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47078238 G protein pathway suppressor 1 isoform 1 [Homo
sapiens]
(527 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47078238 G protein pathway suppressor 1 isoform 1 [Homo sapiens] 1039 0.0
gi|47078240 G protein pathway suppressor 1 isoform 2 [Homo sapiens] 936 0.0
gi|7661914 proteasome (prosome, macropain) 26S subunit, non-ATPa... 100 3e-21
gi|219842262 COP9 constitutive photomorphogenic homolog subunit ... 46 1e-04
gi|4759264 COP9 constitutive photomorphogenic homolog subunit 2 ... 46 1e-04
gi|28872725 proteasome 26S non-ATPase subunit 11 [Homo sapiens] 39 0.009
gi|145309298 coiled-coil domain containing 16 [Homo sapiens] 33 0.49
gi|149944680 HAUS augmin-like complex, subunit 5 [Homo sapiens] 33 0.64
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 33 0.64
gi|150170699 kinesin family member 26A [Homo sapiens] 33 0.84
gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens] 32 1.1
gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens] 32 1.1
gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens] 32 1.1
gi|94681046 cyclin M4 [Homo sapiens] 32 1.4
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens] 32 1.9
gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens] 32 1.9
gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens] 32 1.9
gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens] 32 1.9
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 32 1.9
gi|38679909 testis expressed sequence 2 [Homo sapiens] 31 2.4
gi|42741679 ATPase, H+ transporting, lysosomal V0 subunit A2 [Ho... 31 3.2
gi|63252904 tropomyosin 1 alpha chain isoform 6 [Homo sapiens] 30 4.2
gi|221316695 multimerin 2 precursor [Homo sapiens] 30 5.4
gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 30 7.1
gi|37221184 krev interaction trapped 1 isoform 1 [Homo sapiens] 30 7.1
gi|37221182 krev interaction trapped 1 isoform 1 [Homo sapiens] 30 7.1
gi|37221187 krev interaction trapped 1 isoform 1 [Homo sapiens] 30 7.1
gi|31581522 krev interaction trapped 1 isoform 1 [Homo sapiens] 30 7.1
gi|61742817 krev interaction trapped 1 isoform 2 [Homo sapiens] 30 7.1
gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens] 30 7.1
>gi|47078238 G protein pathway suppressor 1 isoform 1 [Homo sapiens]
Length = 527
Score = 1039 bits (2686), Expect = 0.0
Identities = 527/527 (100%), Positives = 527/527 (100%)
Query: 1 MRDSSAPSSASSSVTDLYCTPHSSRSDLVLPGTAGDFSLSASLSACTLLYEGAVEPMQID 60
MRDSSAPSSASSSVTDLYCTPHSSRSDLVLPGTAGDFSLSASLSACTLLYEGAVEPMQID
Sbjct: 1 MRDSSAPSSASSSVTDLYCTPHSSRSDLVLPGTAGDFSLSASLSACTLLYEGAVEPMQID 60
Query: 61 VDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALS 120
VDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALS
Sbjct: 61 VDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALS 120
Query: 121 FVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEK 180
FVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEK
Sbjct: 121 FVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEK 180
Query: 181 LDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLN 240
LDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLN
Sbjct: 181 LDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLN 240
Query: 241 VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYK 300
VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYK
Sbjct: 241 VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYK 300
Query: 301 QAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEP 360
QAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEP
Sbjct: 301 QAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEP 360
Query: 361 QVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSA 420
QVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSA
Sbjct: 361 QVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSA 420
Query: 421 DMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGK 480
DMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGK
Sbjct: 421 DMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGK 480
Query: 481 EFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTNM 527
EFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTNM
Sbjct: 481 EFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTNM 527
>gi|47078240 G protein pathway suppressor 1 isoform 2 [Homo sapiens]
Length = 491
Score = 936 bits (2418), Expect = 0.0
Identities = 476/481 (98%), Positives = 477/481 (99%), Gaps = 4/481 (0%)
Query: 51 EGAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTL 110
+GAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTL
Sbjct: 11 QGAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTL 70
Query: 111 RVEALKMALSFVQRTFNVDMYEEIHRKLSEATR----ELQNAPDAIPESGVEPPALDTAW 166
RVEALKMALSFVQRTFNVDMYEEIHRKLSEATR ELQNAPDAIPESGVEPPALDTAW
Sbjct: 71 RVEALKMALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESGVEPPALDTAW 130
Query: 167 VEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARD 226
VEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARD
Sbjct: 131 VEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARD 190
Query: 227 YCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLK 286
YCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLK
Sbjct: 191 YCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLK 250
Query: 287 CAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNV 346
CAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNV
Sbjct: 251 CAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNV 310
Query: 347 ISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIR 406
ISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIR
Sbjct: 311 ISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIR 370
Query: 407 NRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVD 466
NRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVD
Sbjct: 371 NRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVD 430
Query: 467 QRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTN 526
QRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTN
Sbjct: 431 QRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTN 490
Query: 527 M 527
M
Sbjct: 491 M 491
>gi|7661914 proteasome (prosome, macropain) 26S subunit, non-ATPase,
6 [Homo sapiens]
Length = 389
Score = 100 bits (249), Expect = 3e-21
Identities = 87/384 (22%), Positives = 170/384 (44%), Gaps = 17/384 (4%)
Query: 108 PTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAP--DAIPESGVEPPALDTA 165
P LR+ L+ LS + + + +E L A R+ AP +A+ +S +D
Sbjct: 15 PDLRIAQLRFLLSLPEHRGDAAVRDE----LMAAVRDNNMAPYYEALCKS--LDWQIDVD 68
Query: 166 WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRAR 225
+ +K +L++LD +L++ + N + IR ++ GD AL + +
Sbjct: 69 LLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTY 128
Query: 226 DYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKL 285
D + H +++ ++++ ++ + + KA+S + E+ G+ D + +L
Sbjct: 129 DKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS---LIEEGGDWDRRN-----RL 180
Query: 286 KCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRN 345
K GL +A R +KQAA+ L L + EL+ Y ++ +R +L+
Sbjct: 181 KVYQGLYCVAIRDFKQAAE-LFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREK 239
Query: 346 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQI 405
VI + L P VR +F YE +Y+ + L ++ + D APH R ++
Sbjct: 240 VIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREM 299
Query: 406 RNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDV 465
R A Q Y S + MA AF V ++ EL++ I G + ++D ++I+
Sbjct: 300 RIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRP 359
Query: 466 DQRSTTFEKSLLMGKEFQRRAKAM 489
D ++ +++++ G R + +
Sbjct: 360 DSKNWQYQETIKKGDLLLNRVQKL 383
>gi|219842262 COP9 constitutive photomorphogenic homolog subunit 2
isoform 2 [Homo sapiens]
Length = 450
Score = 45.8 bits (107), Expect = 1e-04
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 379 KMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALED 438
K+L N++ D ++ H+ L IR + LI+ PY + ++ N VA +E
Sbjct: 335 KILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVES 394
Query: 439 ELTQLILEGLISARVDSHSKIL 460
L Q IL+ I R+D +++L
Sbjct: 395 LLVQCILDNTIHGRIDQVNQLL 416
>gi|4759264 COP9 constitutive photomorphogenic homolog subunit 2
isoform 1 [Homo sapiens]
Length = 443
Score = 45.8 bits (107), Expect = 1e-04
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 379 KMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALED 438
K+L N++ D ++ H+ L IR + LI+ PY + ++ N VA +E
Sbjct: 328 KILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVES 387
Query: 439 ELTQLILEGLISARVDSHSKIL 460
L Q IL+ I R+D +++L
Sbjct: 388 LLVQCILDNTIHGRIDQVNQLL 409
>gi|28872725 proteasome 26S non-ATPase subunit 11 [Homo sapiens]
Length = 422
Score = 39.3 bits (90), Expect = 0.009
Identities = 42/236 (17%), Positives = 87/236 (36%)
Query: 241 VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYK 300
+++V + H LS + KA + A + L +G+ A K
Sbjct: 166 LVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDW 225
Query: 301 QAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEP 360
+ A +F+ D + Y LC + +++Q V + +
Sbjct: 226 KTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTE 285
Query: 361 QVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSA 420
++ + A K L + + L D ++ H+ LY + + LI+ P+
Sbjct: 286 ALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRV 345
Query: 421 DMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSL 476
+ +++ + A +E +L+Q+IL+ +D +L D T+E +L
Sbjct: 346 QIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAAL 401
>gi|145309298 coiled-coil domain containing 16 [Homo sapiens]
Length = 372
Score = 33.5 bits (75), Expect = 0.49
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Query: 133 EIHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNS 192
EIH K+ E +N +A+PE + P +D + K + E + + N+
Sbjct: 230 EIHEKVVERR---ENTAEALPEGFFDDPEVDARVRKVDAPKDQMDKEWDEFQKAMRQVNT 286
Query: 193 IKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKV 244
I E+I D+ G G++ ++CY R + N ++ +
Sbjct: 287 ISEAIVAEEDEEGRLDRQIGEIDEQIECYRRVEKLRNRQDEIKNKLKEILTI 338
>gi|149944680 HAUS augmin-like complex, subunit 5 [Homo sapiens]
Length = 633
Score = 33.1 bits (74), Expect = 0.64
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 393 YLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISAR 452
Y+ HV + T + R + ++ S + R V L E+ +L
Sbjct: 45 YILQHVHSQRTVKKIRGNLLWYGHQDSPQVRRKLE-LEAAVTRLRAEIQEL--------- 94
Query: 453 VDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQG 512
S L RD + + T E++ ++ QRRA + +A +R Q H P + Q
Sbjct: 95 --DQSLELMERDTEAQDTAMEQARQHTQDTQRRALLLRAQAGAMRRQQHTLRDPMQRLQN 152
Query: 513 ELTPANSQSR 522
+L R
Sbjct: 153 QLRRLQDMER 162
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 33.1 bits (74), Expect = 0.64
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 172 KKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSA 231
+K+LL LEK + + ++ S+K ++R ++D LS L + + DY TS
Sbjct: 116 RKSLLALEKEEEEERSKTIESLKTALRTKPMRFVTRFIDLDGLSCILN-FLKTMDYETSE 174
Query: 232 KHVINMCLNVIKVSV-YLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAG 290
+ + IK + Q +HVL++ +ES IA+ + +T+ + ++ A
Sbjct: 175 SRIHTSLIGCIKALMNNSQGRAHVLAH---SESINVIAQSLSTENIKTKVAVLEILGAVC 231
Query: 291 LAELAARKYKQA 302
L +K QA
Sbjct: 232 LVPGGHKKVLQA 243
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 32.7 bits (73), Expect = 0.84
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 131 YEEIHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKA 174
YE + R SEAT +APD++ ESG P T +++ +K+A
Sbjct: 1660 YESLRRD-SEATGSASSAPDSMSESGAASPGARTRSLKSPKKRA 1702
>gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens]
Length = 284
Score = 32.3 bits (72), Expect = 1.1
Identities = 36/187 (19%), Positives = 78/187 (41%), Gaps = 27/187 (14%)
Query: 132 EEIHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGN 191
E I +K+ + +NA D ++ EA +K A K ++++ +L +
Sbjct: 2 EAIKKKMQMLKLDKENAIDRAEQA------------EADKKAAEDKCKQVEEELTH---- 45
Query: 192 SIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVI--------- 242
+++ ++ D+L + D D L+ + +N + ++
Sbjct: 46 -LQKKLKGTEDELDKYSEDLKDAQEKLELTEKKASDAEGDVAALNRRIQLVEEELDRAQE 104
Query: 243 KVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILT-KLKCAAGLAELAARKYKQ 301
+++ LQ ++E ++ E R +D + I +LK A +AE A RKY++
Sbjct: 105 RLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEE 164
Query: 302 AAKCLLL 308
A+ L++
Sbjct: 165 VARKLVI 171
>gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens]
Length = 284
Score = 32.3 bits (72), Expect = 1.1
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 22/166 (13%)
Query: 161 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 219
ALD A EA +K A + ++L+ D+ + KE + R +D D L+ +L A
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEEDI------AAKEKLLRVSEDERDRVLE--ELHKAED 69
Query: 220 CYSRARDYCTSAKHVI---NMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEI 267
A + A+ + N + ++ +++ LQ ++E ++
Sbjct: 70 SLLAAEEAAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKV 129
Query: 268 AEQRGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 312
E R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 130 IESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens]
Length = 284
Score = 32.3 bits (72), Expect = 1.1
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 22/166 (13%)
Query: 161 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 219
ALD A EA +K A + ++L+ D+ + KE + R +D D L+ +L A
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEEDI------AAKEKLLRVSEDERDRVLE--ELHKAED 69
Query: 220 CYSRARDYCTSAKHVI---NMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEI 267
A + A+ + N + ++ +++ LQ ++E ++
Sbjct: 70 SLLAAEEAAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKV 129
Query: 268 AEQRGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 312
E R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 130 IESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|94681046 cyclin M4 [Homo sapiens]
Length = 775
Score = 32.0 bits (71), Expect = 1.4
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 389 LLDMYLAPHVRTLYTQIRNRALIQYFSPY---VSADMHRMAAAFNTTVAALEDELTQL 443
LLD +L +RT+Y + + +++ PY V +++ + A +ED +TQL
Sbjct: 323 LLDFFLGQEIRTVYNREKLMEMLKVTEPYNDLVKEELNMIQGALELRTKTVEDIMTQL 380
>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
Length = 284
Score = 31.6 bits (70), Expect = 1.9
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 161 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 219
ALD A EA +K A + ++L+ +L S+++ ++ D+L + D L+
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEDELV-----SLQKKLKGTEDELDKYSEALKDAQEKLE 72
Query: 220 CYSRARDYCTSAKHVINMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEIAEQ 270
+ + +N + ++ +++ LQ ++E ++ E
Sbjct: 73 LAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIES 132
Query: 271 RGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 312
R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 133 RAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens]
Length = 284
Score = 31.6 bits (70), Expect = 1.9
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 161 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 219
ALD A EA +K A + ++L+ +L S+++ ++ D+L + D L+
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEDELV-----SLQKKLKGTEDELDKYSEALKDAQEKLE 72
Query: 220 CYSRARDYCTSAKHVINMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEIAEQ 270
+ + +N + ++ +++ LQ ++E ++ E
Sbjct: 73 LAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIES 132
Query: 271 RGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 312
R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 133 RAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens]
Length = 284
Score = 31.6 bits (70), Expect = 1.9
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 161 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 219
ALD A EA +K A + ++L+ +L S+++ ++ D+L + D L+
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEDELV-----SLQKKLKGTEDELDKYSEALKDAQEKLE 72
Query: 220 CYSRARDYCTSAKHVINMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEIAEQ 270
+ + +N + ++ +++ LQ ++E ++ E
Sbjct: 73 LAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIES 132
Query: 271 RGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 312
R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 133 RAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens]
Length = 284
Score = 31.6 bits (70), Expect = 1.9
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 161 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 219
ALD A EA +K A + ++L+ +L S+++ ++ D+L + D L+
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEDELV-----SLQKKLKGTEDELDKYSEALKDAQEKLE 72
Query: 220 CYSRARDYCTSAKHVINMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEIAEQ 270
+ + +N + ++ +++ LQ ++E ++ E
Sbjct: 73 LAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIES 132
Query: 271 RGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 312
R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 133 RAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 31.6 bits (70), Expect = 1.9
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 17/94 (18%)
Query: 143 RELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIK-------- 194
+EL P+A+PES EPP E +K+ +++DT+ K +++
Sbjct: 1490 KELAGDPEAVPESDEEPPP-----GEQAQKQDQKNSKEVDTEFKEGNPATMEIDSETVQA 1544
Query: 195 -ESIRRGHDDLGDHYLDCGDLSNA---LKCYSRA 224
+S+ + + D + DC + A L+ Y+RA
Sbjct: 1545 VQSLTQESSEQDDTFQDCAETQEACRSLQNYTRA 1578
>gi|38679909 testis expressed sequence 2 [Homo sapiens]
Length = 1134
Score = 31.2 bits (69), Expect = 2.4
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 4 SSAPSSASSSVTDLYCTPHSSRSDLVLPGTAGDFSLSASLSACTLL--YEGAVEPMQIDV 61
SS P ++S SV+ L SS S L P + S SAS S + + V+ + +V
Sbjct: 140 SSGPLASSPSVSSLSEQKTSSSSPLSSPSKSPILSSSASTSTLSSAKPFMSLVKSLSTEV 199
Query: 62 DPQEDPQNA 70
+P+E P A
Sbjct: 200 EPKESPHPA 208
>gi|42741679 ATPase, H+ transporting, lysosomal V0 subunit A2 [Homo
sapiens]
Length = 856
Score = 30.8 bits (68), Expect = 3.2
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 115 LKMALSFVQRTF--NVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRK 172
L +S QR F V EE+ R L +E+ A +PE PPA V ++
Sbjct: 40 LNQNVSSFQRKFVGEVKRCEELERILVYLVQEINRADIPLPEGEASPPAPPLKQVLEMQE 99
Query: 173 KALLKLEKLDTDLKNYKGNSIKESIRR 199
+L+KL+ +L+ N KE +R+
Sbjct: 100 ----QLQKLEVELREVTKN--KEKLRK 120
>gi|63252904 tropomyosin 1 alpha chain isoform 6 [Homo sapiens]
Length = 245
Score = 30.4 bits (67), Expect = 4.2
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 243 KVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILT-KLKCAAGLAELAARKYKQ 301
+++ LQ ++E ++ E R ++D + I +LK A +AE A RKY++
Sbjct: 69 RLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEE 128
Query: 302 AAKCLLLASFD 312
A+ L++ D
Sbjct: 129 VARKLVIIESD 139
>gi|221316695 multimerin 2 precursor [Homo sapiens]
Length = 949
Score = 30.0 bits (66), Expect = 5.4
Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 9/168 (5%)
Query: 53 AVEPMQIDVDPQ----EDPQNAPDVN--YVVENPSLDLEQYAASYSGLMRIERLQFIADH 106
++ +Q DVD + Q AP N V+ P S + + H
Sbjct: 325 SISELQADVDTKLKRLHKAQEAPGTNGSLVLATPGAGARPEPDSLQARLGQLQRNLSELH 384
Query: 107 CPTLR-VEALKMALSFVQRTF--NVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPALD 163
T R E L+ L ++ T +VD +E++ + E ++ + E V AL
Sbjct: 385 MTTARREEELQYTLEDMRATLTRHVDEIKELYSESDETFDQISKVERQVEELQVNHTALR 444
Query: 164 TAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 211
V K +++ K + + + + N + ++ GH DL + DC
Sbjct: 445 ELRVILMEKSLIMEENKEEVERQLLELNLTLQHLQGGHADLIKYVKDC 492
>gi|4507577 tumor necrosis factor receptor 2 precursor [Homo
sapiens]
Length = 461
Score = 29.6 bits (65), Expect = 7.1
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 9 SASSSVTDLYCTPHSSRSDLVLPGTAGDFSLSASLSACTLLYEGAVE-PMQID-----VD 62
S ++S TD+ C PH + + +PG A ++ S S + GAV P +
Sbjct: 170 SNTTSSTDI-CRPHQICNVVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQ 228
Query: 63 PQEDPQNAPDVNYVV 77
P +P AP ++++
Sbjct: 229 PTPEPSTAPSTSFLL 243
>gi|37221184 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 29.6 bits (65), Expect = 7.1
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 167 VEATRKKALLKLEKLDTDLKNYK-----------GNSIKESIRRGHDDLGDHYLDCGDLS 215
VEATR LL+ K + +L N + G++ I H + H D S
Sbjct: 334 VEATR--ILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRS 391
Query: 216 NALKCYSRARDYCTSAKHVINMCLN--VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 273
C ++ A ++ +N KV +Y + S+ + +T G
Sbjct: 392 PLNICEENKQNNWEEAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGM 451
Query: 274 RDSQ-TQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLC 332
R SQ TQ T C+ L+ L + Y + + + D+PE+L+
Sbjct: 452 RLSQETQQYFTIWICSENLS-LQLKPYHKPLQHVR-------DWPEILAE---------- 493
Query: 333 ALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDM 392
L D Q + +L LE+E Q+ D + + L + DE + NLL
Sbjct: 494 -LTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPL---------AILILFDEARYNLLKGF 543
Query: 393 YLAPHVRTL 401
Y AP + +
Sbjct: 544 YTAPDAKLI 552
>gi|37221182 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 29.6 bits (65), Expect = 7.1
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 167 VEATRKKALLKLEKLDTDLKNYK-----------GNSIKESIRRGHDDLGDHYLDCGDLS 215
VEATR LL+ K + +L N + G++ I H + H D S
Sbjct: 334 VEATR--ILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRS 391
Query: 216 NALKCYSRARDYCTSAKHVINMCLN--VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 273
C ++ A ++ +N KV +Y + S+ + +T G
Sbjct: 392 PLNICEENKQNNWEEAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGM 451
Query: 274 RDSQ-TQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLC 332
R SQ TQ T C+ L+ L + Y + + + D+PE+L+
Sbjct: 452 RLSQETQQYFTIWICSENLS-LQLKPYHKPLQHVR-------DWPEILAE---------- 493
Query: 333 ALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDM 392
L D Q + +L LE+E Q+ D + + L + DE + NLL
Sbjct: 494 -LTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPL---------AILILFDEARYNLLKGF 543
Query: 393 YLAPHVRTL 401
Y AP + +
Sbjct: 544 YTAPDAKLI 552
>gi|37221187 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 29.6 bits (65), Expect = 7.1
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 167 VEATRKKALLKLEKLDTDLKNYK-----------GNSIKESIRRGHDDLGDHYLDCGDLS 215
VEATR LL+ K + +L N + G++ I H + H D S
Sbjct: 334 VEATR--ILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRS 391
Query: 216 NALKCYSRARDYCTSAKHVINMCLN--VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 273
C ++ A ++ +N KV +Y + S+ + +T G
Sbjct: 392 PLNICEENKQNNWEEAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGM 451
Query: 274 RDSQ-TQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLC 332
R SQ TQ T C+ L+ L + Y + + + D+PE+L+
Sbjct: 452 RLSQETQQYFTIWICSENLS-LQLKPYHKPLQHVR-------DWPEILAE---------- 493
Query: 333 ALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDM 392
L D Q + +L LE+E Q+ D + + L + DE + NLL
Sbjct: 494 -LTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPL---------AILILFDEARYNLLKGF 543
Query: 393 YLAPHVRTL 401
Y AP + +
Sbjct: 544 YTAPDAKLI 552
>gi|31581522 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 29.6 bits (65), Expect = 7.1
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 167 VEATRKKALLKLEKLDTDLKNYK-----------GNSIKESIRRGHDDLGDHYLDCGDLS 215
VEATR LL+ K + +L N + G++ I H + H D S
Sbjct: 334 VEATR--ILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRS 391
Query: 216 NALKCYSRARDYCTSAKHVINMCLN--VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 273
C ++ A ++ +N KV +Y + S+ + +T G
Sbjct: 392 PLNICEENKQNNWEEAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGM 451
Query: 274 RDSQ-TQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLC 332
R SQ TQ T C+ L+ L + Y + + + D+PE+L+
Sbjct: 452 RLSQETQQYFTIWICSENLS-LQLKPYHKPLQHVR-------DWPEILAE---------- 493
Query: 333 ALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDM 392
L D Q + +L LE+E Q+ D + + L + DE + NLL
Sbjct: 494 -LTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPL---------AILILFDEARYNLLKGF 543
Query: 393 YLAPHVRTL 401
Y AP + +
Sbjct: 544 YTAPDAKLI 552
>gi|61742817 krev interaction trapped 1 isoform 2 [Homo sapiens]
Length = 688
Score = 29.6 bits (65), Expect = 7.1
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 167 VEATRKKALLKLEKLDTDLKNYK-----------GNSIKESIRRGHDDLGDHYLDCGDLS 215
VEATR LL+ K + +L N + G++ I H + H D S
Sbjct: 286 VEATR--ILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRS 343
Query: 216 NALKCYSRARDYCTSAKHVINMCLN--VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 273
C ++ A ++ +N KV +Y + S+ + +T G
Sbjct: 344 PLNICEENKQNNWEEAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGM 403
Query: 274 RDSQ-TQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLC 332
R SQ TQ T C+ L+ L + Y + + + D+PE+L+
Sbjct: 404 RLSQETQQYFTIWICSENLS-LQLKPYHKPLQHVR-------DWPEILAE---------- 445
Query: 333 ALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDM 392
L D Q + +L LE+E Q+ D + + L + DE + NLL
Sbjct: 446 -LTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPL---------AILILFDEARYNLLKGF 495
Query: 393 YLAPHVRTL 401
Y AP + +
Sbjct: 496 YTAPDAKLI 504
>gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens]
Length = 285
Score = 29.6 bits (65), Expect = 7.1
Identities = 36/193 (18%), Positives = 81/193 (41%), Gaps = 27/193 (13%)
Query: 130 MYEEIHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYK 189
M E I +K+ + +NA D ++ EA +K+A + ++L+ +L
Sbjct: 1 MMEAIKKKMQMLKLDKENALDRAEQA------------EAEQKQAEERSKQLEDELA--- 45
Query: 190 GNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVI------- 242
++++ ++ D+L + D L+ + + +N + ++
Sbjct: 46 --AMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRA 103
Query: 243 --KVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILT-KLKCAAGLAELAARKY 299
+++ LQ ++E ++ E R +D + + +LK A +AE A RKY
Sbjct: 104 QERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKY 163
Query: 300 KQAAKCLLLASFD 312
++ A+ L++ D
Sbjct: 164 EEVARKLVIIEGD 176
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,330,616
Number of Sequences: 37866
Number of extensions: 742621
Number of successful extensions: 2340
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2326
Number of HSP's gapped (non-prelim): 41
length of query: 527
length of database: 18,247,518
effective HSP length: 107
effective length of query: 420
effective length of database: 14,195,856
effective search space: 5962259520
effective search space used: 5962259520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.