Guide to the Human Genome
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Name: ATP6V0A2 Sequence: fasta or formatted (856aa) NCBI GI: 42741679
Description:

ATPase, H+ transporting, lysosomal V0 subunit A2

Referenced in:

Lysosomes and Related Organelles

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         40           2
 C cysteine            2.2         19           1
 D aspartate           2.9         25           2
 E glutamate           7.6         65           3
 F phenylalanine       6.9         59           2
 G glycine             6.0         51           1
 H histidine           2.3         20           1
 I isoleucine          6.2         53           2
 K lysine              4.8         41           2
 L leucine            12.9        110           4
 M methionine          3.3         28           1
 N asparagine          4.4         38           2
 P proline             3.9         33           2
 Q glutamine           3.4         29           1
 R arginine            4.7         40           2
 S serine              6.9         59           3
 T threonine           4.3         37           2
 V valine              7.6         65           2
 W tryptophan          1.4         12           1
 Y tyrosine            3.7         32           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, H+ transporting, lysosomal V0 subunit A2 [Ho... 
ATP6V0A1              0.506   ATPase, H+ transporting, lysosomal V0 subunit a1 is...
ATP6V0A1              0.506   ATPase, H+ transporting, lysosomal V0 subunit a1 is...
ATP6V0A1              0.505   ATPase, H+ transporting, lysosomal V0 subunit a1 iso...
ATP6V0A4              0.487   ATPase, H+ transporting, lysosomal V0 subunit a4 [Ho...
ATP6V0A4              0.487   ATPase, H+ transporting, lysosomal V0 subunit a4 [Ho...
ATP6V0A4              0.487   ATPase, H+ transporting, lysosomal V0 subunit a4 [Ho...
TCIRG1                0.467   T-cell, immune regulator 1 isoform a 
TCIRG1                0.369   T-cell, immune regulator 1 isoform b 
CAGE1                 0.007   cancer antigen 1 
LOC728080             0.006   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.006   PREDICTED: similar to Golgin subfamily A member 8-l...
OBSCN                 0.006   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.006   obscurin, cytoskeletal calmodulin and titin-interac...
LOC653720             0.006   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.006   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.006   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653073             0.006   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653073             0.006   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653720             0.006   PREDICTED: similar to Golgin subfamily A member 8-l...
SYNE2                 0.006   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.006   spectrin repeat containing, nuclear envelope 2 isof...
MYH1                  0.006   myosin, heavy chain 1, skeletal muscle, adult [Homo...
LOC728080             0.005   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.005   PREDICTED: similar to Golgin subfamily A member 8-l...
CEP135                0.005   centrosome protein 4 
MYH2                  0.005   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.005   myosin, heavy chain 2, skeletal muscle, adult [Homo...
FKBP15                0.005   FK506 binding protein 15, 133kDa 
LOC728498             0.005   PREDICTED: similar to Golgin subfamily A member 8-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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