HMBOX1 30376

Name: HMBOX1	Sequence: fasta or formatted (420aa)		NCBI GI: 47059040
Description: homeobox containing 1		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt mRNA [420aa] homeobox containing 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 30 2 C cysteine 0.7 3 1 D aspartate 6.4 27 3 E glutamate 7.9 33 2 F phenylalanine 2.4 10 1 G glycine 4.8 20 2 H histidine 2.9 12 1 I isoleucine 4.5 19 1 K lysine 4.3 18 2 L leucine 6.9 29 2 M methionine 2.4 10 1 N asparagine 5.5 23 2 P proline 4.8 20 3 Q glutamine 5.2 22 2 R arginine 7.6 32 2 S serine 11.9 50 3 T threonine 6.4 27 2 V valine 4.3 18 2 W tryptophan 1.2 5 1 Y tyrosine 2.9 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox containing 1 HMBOX1 1.000 homeobox containing 1 HNF1A 0.061 hepatic nuclear factor-1-alpha HNF1B 0.059 transcription factor 2 PAX3 0.027 paired box 3 isoform PAX3i PAX3 0.027 paired box 3 isoform PAX3g PAX3 0.027 paired box 3 isoform PAX3h PAX3 0.027 paired box 3 isoform PAX3e PAX3 0.027 paired box 3 isoform PAX3d PAX3 0.027 paired box 3 isoform PAX3 PBX1 0.022 pre-B-cell leukemia homeobox 1 PRRX1 0.022 paired mesoderm homeobox 1 isoform pmx-1a PRRX1 0.022 paired mesoderm homeobox 1 isoform pmx-1b ESX1 0.022 extraembryonic, spermatogenesis, homeobox 1-like [Ho... NOBOX 0.022 NOBOX oogenesis homeobox PITX2 0.020 paired-like homeodomain transcription factor 2 isofo... PITX2 0.020 paired-like homeodomain transcription factor 2 isofo... PITX2 0.020 paired-like homeodomain transcription factor 2 isofo... ARX 0.020 aristaless related homeobox GSC2 0.018 goosecoid homeobox 2 PAX7 0.018 paired box 7 isoform 2 PAX7 0.017 paired box 7 isoform 1 PAX7 0.017 paired box 7 isoform 3 RAX 0.017 retina and anterior neural fold homeobox OTX2 0.017 orthodenticle homeobox 2 isoform a PHOX2B 0.016 paired-like homeobox 2b SFRS18 0.016 splicing factor, arginine/serine-rich 130 SFRS18 0.016 splicing factor, arginine/serine-rich 130 PITX3 0.015 paired-like homeodomain 3 PITX1 0.015 paired-like homeodomain transcription factor 1 [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.