OTX2 867

Name: OTX2	Sequence: fasta or formatted (297aa)		NCBI GI: 11119420
Description: orthodenticle homeobox 2 isoform a		Referenced in: Homeobox and Related Proteins Stem Cells and Early Development
Other entries for this name: alt prot [289aa] orthodenticle homeobox 2 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 22 2 C cysteine 2.0 6 1 D aspartate 3.7 11 1 E glutamate 2.4 7 2 F phenylalanine 3.0 9 1 G glycine 6.7 20 2 H histidine 1.3 4 2 I isoleucine 1.7 5 1 K lysine 4.7 14 3 L leucine 7.4 22 2 M methionine 3.0 9 2 N asparagine 3.4 10 1 P proline 8.1 24 2 Q glutamine 7.4 22 7 R arginine 4.7 14 2 S serine 14.5 43 3 T threonine 8.4 25 2 V valine 4.0 12 1 W tryptophan 1.7 5 1 Y tyrosine 4.4 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 orthodenticle homeobox 2 isoform a OTX2 0.954 orthodenticle homeobox 2 isoform b OTX1 0.517 orthodenticle homeobox 1 CRX 0.401 cone-rod homeobox protein ARGFX 0.134 arginine-fifty homeobox PHOX2A 0.128 paired-like homeobox 2a DRGX 0.122 dorsal root ganglia homeobox PHOX2B 0.120 paired-like homeobox 2b PAX6 0.116 paired box gene 6 isoform a PAX6 0.116 paired box gene 6 isoform b PAX6 0.116 paired box gene 6 isoform a PRRX2 0.115 paired related homeobox 2 DMBX1 0.113 diencephalon/mesencephalon homeobox 1 isoform b [Hom... DMBX1 0.113 diencephalon/mesencephalon homeobox 1 isoform a [Hom... PAX3 0.113 paired box 3 isoform PAX3h SHOX 0.111 short stature homeobox isoform SHOXb SHOX 0.111 short stature homeobox isoform SHOXa PAX3 0.111 paired box 3 isoform PAX3i PAX3 0.111 paired box 3 isoform PAX3e PAX3 0.111 paired box 3 isoform PAX3d PAX3 0.111 paired box 3 isoform PAX3 OTP 0.111 PREDICTED: orthopedia homeobox OTP 0.111 orthopedia homeobox SHOX2 0.110 short stature homeobox 2 isoform a SHOX2 0.110 short stature homeobox 2 isoform b PITX1 0.110 paired-like homeodomain transcription factor 1 [Hom... PAX3 0.108 paired box 3 isoform PAX3g ARX 0.106 aristaless related homeobox PITX3 0.106 paired-like homeodomain 3 PRRX1 0.104 paired mesoderm homeobox 1 isoform pmx-1b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.