HNF1A 3380

Name: HNF1A	Sequence: fasta or formatted (631aa)		NCBI GI: 134304844
Description: hepatic nuclear factor-1-alpha		Referenced in: Homeobox and Related Proteins Liver
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 48 2 C cysteine 0.5 3 1 D aspartate 2.2 14 3 E glutamate 6.8 43 2 F phenylalanine 1.7 11 1 G glycine 7.6 48 3 H histidine 3.5 22 1 I isoleucine 2.2 14 1 K lysine 3.5 22 2 L leucine 11.3 71 2 M methionine 1.9 12 1 N asparagine 2.9 18 1 P proline 9.5 60 3 Q glutamine 7.9 50 2 R arginine 3.2 20 2 S serine 11.6 73 4 T threonine 8.1 51 2 V valine 5.5 35 2 W tryptophan 0.6 4 1 Y tyrosine 1.9 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatic nuclear factor-1-alpha HNF1B 0.422 transcription factor 2 HMBOX1 0.041 homeobox containing 1 HMBOX1 0.041 homeobox containing 1 MUC6 0.032 mucin 6, gastric RPRD2 0.028 Regulation of nuclear pre-mRNA domain containing 2 ... SRCAP 0.024 Snf2-related CBP activator protein MUC2 0.024 mucin 2 precursor MUC4 0.024 mucin 4 isoform a MUC12 0.024 PREDICTED: mucin 12 ATN1 0.023 atrophin-1 ATN1 0.023 atrophin-1 FLJ22184 0.022 PREDICTED: hypothetical protein FLJ22184 SAP130 0.022 Sin3A-associated protein, 130kDa isoform b SAP130 0.022 Sin3A-associated protein, 130kDa isoform a MUC5B 0.022 mucin 5, subtype B, tracheobronchial CIC 0.022 capicua homolog WNK1 0.022 WNK lysine deficient protein kinase 1 LOC100130716 0.020 PREDICTED: similar to Mucin-12 RERE 0.020 atrophin-1 like protein isoform b RERE 0.020 atrophin-1 like protein isoform a RERE 0.020 atrophin-1 like protein isoform a KIAA0754 0.020 hypothetical protein LOC643314 ZNF469 0.020 zinc finger protein 469 LOC100133714 0.019 PREDICTED: similar to Mucin-12, partial MUC12 0.019 PREDICTED: mucin 12 LOC100130716 0.019 PREDICTED: similar to mucin 11 MUC3A 0.019 PREDICTED: mucin 3A, intestinal LOC284297 0.018 hypothetical protein LOC284297 LOC100131514 0.018 PREDICTED: similar to hCG1747327, partial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.