Guide to the Human Genome
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Name: IFNAR1 Sequence: fasta or formatted (557aa) NCBI GI: 46488932
Description:

interferon-alpha receptor 1 precursor

Referenced in:

Interferon

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         27           3
 C cysteine            2.0         11           1
 D aspartate           4.5         25           2
 E glutamate           7.5         42           2
 F phenylalanine       4.7         26           2
 G glycine             3.4         19           2
 H histidine           1.6          9           1
 I isoleucine          7.7         43           2
 K lysine              7.9         44           2
 L leucine             7.7         43           3
 M methionine          1.1          6           2
 N asparagine          6.3         35           2
 P proline             4.7         26           3
 Q glutamine           4.1         23           2
 R arginine            2.3         13           1
 S serine              9.2         51           3
 T threonine           6.5         36           2
 V valine              7.7         43           2
 W tryptophan          2.3         13           1
 Y tyrosine            3.9         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interferon-alpha receptor 1 precursor 
IL10RB                0.063   interleukin 10 receptor, beta precursor 
IL20RA                0.041   interleukin 20 receptor, alpha 
IFNGR2                0.029   interferon gamma receptor 2 precursor 
IL20RB                0.026   interleukin 20 receptor beta precursor 
IL22RA2               0.026   interleukin 22-binding protein isoform 2 
IL22RA1               0.023   interleukin 22 receptor, alpha 1 
IL22RA2               0.023   interleukin 22-binding protein isoform 1 
IFNGR1                0.018   interferon gamma receptor 1 precursor 
HP1BP3                0.014   HP1-BP74 
IL28RA                0.012   interleukin 28 receptor, alpha isoform 1 
IL28RA                0.012   interleukin 28 receptor, alpha isoform 3 
IL28RA                0.012   interleukin 28 receptor, alpha isoform 2 
PCDH15                0.011   protocadherin 15 isoform CD2-1 precursor 
NEO1                  0.009   neogenin homolog 1 
TTN                   0.009   titin isoform N2-A 
TTN                   0.009   titin isoform novex-2 
TTN                   0.009   titin isoform novex-1 
TTN                   0.009   titin isoform N2-B 
IL10RA                0.008   interleukin 10 receptor, alpha precursor 
F3                    0.008   coagulation factor III precursor 
PTPRD                 0.008   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.008   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.008   protein tyrosine phosphatase, receptor type, D isofo...
FNDC3A                0.008   fibronectin type III domain containing 3A isoform 1...
FNDC3A                0.008   fibronectin type III domain containing 3A isoform 2...
EPHA5                 0.006   ephrin receptor EphA5 isoform b precursor 
EPHA5                 0.006   ephrin receptor EphA5 isoform a precursor 
TRIM44                0.006   DIPB protein 
USP37                 0.006   ubiquitin specific peptidase 37 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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