Guide to the Human Genome
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Name: IL20RB Sequence: fasta or formatted (311aa) NCBI GI: 40255073
Description:

interleukin 20 receptor beta precursor

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         21           2
 C cysteine            2.9          9           2
 D aspartate           2.6          8           2
 E glutamate           8.0         25           2
 F phenylalanine       4.5         14           2
 G glycine             4.8         15           2
 H histidine           1.9          6           1
 I isoleucine          5.8         18           1
 K lysine              2.9          9           1
 L leucine            10.9         34           2
 M methionine          3.5         11           1
 N asparagine          1.9          6           1
 P proline             6.4         20           1
 Q glutamine           3.2         10           1
 R arginine            3.9         12           2
 S serine              7.1         22           2
 T threonine           7.1         22           1
 V valine              9.3         29           3
 W tryptophan          2.9          9           1
 Y tyrosine            3.5         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 20 receptor beta precursor 
IL10RB                0.074   interleukin 10 receptor, beta precursor 
IFNGR2                0.069   interferon gamma receptor 2 precursor 
IL22RA2               0.059   interleukin 22-binding protein isoform 2 
IFNAR1                0.047   interferon-alpha receptor 1 precursor 
IL20RA                0.044   interleukin 20 receptor, alpha 
IL22RA2               0.042   interleukin 22-binding protein isoform 1 
IL28RA                0.033   interleukin 28 receptor, alpha isoform 1 
IL28RA                0.033   interleukin 28 receptor, alpha isoform 2 
IL10RA                0.031   interleukin 10 receptor, alpha precursor 
IL28RA                0.031   interleukin 28 receptor, alpha isoform 3 
F3                    0.028   coagulation factor III precursor 
IL22RA2               0.025   interleukin 22-binding protein isoform 3 
IFNGR1                0.018   interferon gamma receptor 1 precursor 
PTPRH                 0.010   protein tyrosine phosphatase, receptor type, H isof...
LOC100132308          0.008   PREDICTED: similar to solute carrier family 29 (nuc...
LOC100132308          0.008   PREDICTED: similar to solute carrier family 29 (nuc...
IL12RB2               0.008   interleukin 12 receptor, beta 2 precursor 
IL22RA1               0.007   interleukin 22 receptor, alpha 1 
CSMD1                 0.007   CUB and Sushi multiple domains 1 
CR1                   0.007   complement receptor 1 isoform S precursor 
CR1                   0.007   complement receptor 1 isoform F precursor 
ITGA7                 0.005   integrin alpha 7 isoform 3 
ITGA7                 0.005   integrin alpha 7 isoform 1 precursor 
ITGA7                 0.005   integrin alpha 7 isoform 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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