Guide to the Human Genome
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Name: IFNGR1 Sequence: fasta or formatted (489aa) NCBI GI: 4557880
Description:

interferon gamma receptor 1 precursor

Referenced in:

Interferon

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         16           2
 C cysteine            2.5         12           1
 D aspartate           4.9         24           2
 E glutamate           9.2         45           2
 F phenylalanine       2.9         14           1
 G glycine             4.7         23           1
 H histidine           2.5         12           2
 I isoleucine          7.4         36           2
 K lysine              5.9         29           2
 L leucine             7.6         37           3
 M methionine          1.6          8           1
 N asparagine          4.5         22           2
 P proline             6.5         32           2
 Q glutamine           2.9         14           1
 R arginine            2.5         12           1
 S serine             11.9         58           3
 T threonine           5.3         26           2
 V valine              9.4         46           2
 W tryptophan          1.0          5           1
 Y tyrosine            3.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interferon gamma receptor 1 precursor 
IL20RA                0.039   interleukin 20 receptor, alpha 
IL22RA2               0.027   interleukin 22-binding protein isoform 2 
IL10RB                0.025   interleukin 10 receptor, beta precursor 
IFNAR1                0.021   interferon-alpha receptor 1 precursor 
CWC22                 0.016   CWC22 spliceosome-associated protein homolog 
IL22RA2               0.016   interleukin 22-binding protein isoform 1 
MYST4                 0.016   MYST histone acetyltransferase (monocytic leukemia)...
CHD9                  0.015   chromodomain helicase DNA binding protein 9 
IL22RA1               0.014   interleukin 22 receptor, alpha 1 
IFNGR2                0.014   interferon gamma receptor 2 precursor 
IL20RB                0.011   interleukin 20 receptor beta precursor 
F3                    0.009   coagulation factor III precursor 
DSPP                  0.008   dentin sialophosphoprotein preproprotein 
KIAA0430              0.008   limkain b1 
PPRC1                 0.007   peroxisome proliferator-activated receptor gamma, co...
MAGEC1                0.007   melanoma antigen family C, 1 
SSH2                  0.007   slingshot 2 
MLLT6                 0.007   myeloid/lymphoid or mixed-lineage leukemia (trithora...
HEMGN                 0.007   hemogen 
HEMGN                 0.007   hemogen 
CAD                   0.007   carbamoylphosphate synthetase 2/aspartate transcarba...
CNR1                  0.007   cannabinoid receptor 1 isoform a 
CNR1                  0.007   cannabinoid receptor 1 isoform a 
CNR1                  0.007   cannabinoid receptor 1 isoform a 
CNR1                  0.007   cannabinoid receptor 1 isoform a 
CNR1                  0.007   cannabinoid receptor 1 isoform a 
CNR1                  0.007   cannabinoid receptor 1 isoform b 
ATG16L1               0.007   APG16 autophagy 16-like isoform 1 
ATG16L1               0.007   APG16 autophagy 16-like isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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