Guide to the Human Genome
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Name: F3 Sequence: fasta or formatted (295aa) NCBI GI: 4503641
Description:

coagulation factor III precursor

Referenced in:

Coagulation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         16           2
 C cysteine            1.7          5           1
 D aspartate           3.7         11           1
 E glutamate           7.1         21           1
 F phenylalanine       4.4         13           1
 G glycine             5.8         17           1
 H histidine           0.3          1           1
 I isoleucine          5.1         15           2
 K lysine              6.8         20           2
 L leucine             6.8         20           3
 M methionine          0.7          2           1
 N asparagine          5.4         16           2
 P proline             4.7         14           1
 Q glutamine           3.4         10           1
 R arginine            4.1         12           2
 S serine              7.8         23           4
 T threonine          10.2         30           2
 V valine             10.2         30           2
 W tryptophan          2.4          7           1
 Y tyrosine            4.1         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coagulation factor III precursor 
IL22RA2               0.063   interleukin 22-binding protein isoform 2 
IL22RA2               0.052   interleukin 22-binding protein isoform 3 
IL20RA                0.051   interleukin 20 receptor, alpha 
IL22RA2               0.045   interleukin 22-binding protein isoform 1 
IL22RA1               0.035   interleukin 22 receptor, alpha 1 
IL20RB                0.030   interleukin 20 receptor beta precursor 
IL10RB                0.024   interleukin 10 receptor, beta precursor 
IFNAR2                0.017   interferon alpha/beta receptor 2 isoform b precursor...
IFNAR2                0.017   interferon alpha/beta receptor 2 isoform b precursor...
IFNAR1                0.016   interferon-alpha receptor 1 precursor 
IFNAR2                0.016   interferon alpha/beta receptor 2 isoform a precursor...
IFNGR1                0.016   interferon gamma receptor 1 precursor 
PTPRD                 0.014   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.014   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.014   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.014   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.012   protein tyrosine phosphatase, receptor type, D isof...
LPHN1                 0.010   latrophilin 1 isoform 1 precursor 
LPHN1                 0.010   latrophilin 1 isoform 2 precursor 
IL28RA                0.010   interleukin 28 receptor, alpha isoform 1 
IL28RA                0.010   interleukin 28 receptor, alpha isoform 2 
CD93                  0.010   CD93 antigen precursor 
EVI2B                 0.010   ecotropic viral integration site 2B 
KIAA1549              0.007   hypothetical protein LOC57670 
ZNF844                0.005   zinc finger protein 844 
ZFYVE9                0.005   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE9                0.005   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE9                0.005   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
SORL1                 0.005   sortilin-related receptor containing LDLR class A rep...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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