Guide to the Human Genome
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Name: GPR162 Sequence: fasta or formatted (304aa) NCBI GI: 7656843
Description:

G protein-coupled receptor 162 isoform 1

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt prot [588aa] G protein-coupled receptor 162 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         18           1
 C cysteine            2.0          6           1
 D aspartate           5.3         16           3
 E glutamate           7.6         23           3
 F phenylalanine       3.9         12           2
 G glycine            11.5         35           3
 H histidine           2.0          6           1
 I isoleucine          2.3          7           1
 K lysine              1.3          4           1
 L leucine            11.2         34           3
 M methionine          1.6          5           1
 N asparagine          1.0          3           1
 P proline             9.9         30           2
 Q glutamine           2.6          8           1
 R arginine            8.9         27           2
 S serine             10.5         32           3
 T threonine           3.9         12           2
 V valine              4.9         15           2
 W tryptophan          2.3          7           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 162 isoform 1 
GPR162                0.985   G protein-coupled receptor 162 isoform 2 
GPR153                0.155   G protein-coupled receptor 153 
INPPL1                0.018   inositol polyphosphate phosphatase-like 1 
MAP3K11               0.016   mitogen-activated protein kinase kinase kinase 11 [Ho...
LOC100293652          0.016   PREDICTED: hypothetical protein 
LOC100291016          0.016   PREDICTED: hypothetical protein XP_002347804 
LOC100287809          0.016   PREDICTED: hypothetical protein XP_002343597 
SPTY2D1               0.016   SPT2, Suppressor of Ty, domain containing 1 
SPEG                  0.016   SPEG complex locus 
C15orf52              0.016   hypothetical protein LOC388115 
ZFHX2                 0.015   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.015   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.015   PREDICTED: zinc finger homeobox 2 
HMX1                  0.015   homeo box (H6 family) 1 
LOC100131646          0.013   PREDICTED: hypothetical protein 
LOC100287290          0.013   PREDICTED: hypothetical protein 
LOC100287290          0.013   PREDICTED: hypothetical protein XP_002342446 
LOC100293124          0.013   PREDICTED: similar to patatin-like phospholipase do...
LMTK3                 0.013   lemur tyrosine kinase 3 
PER1                  0.013   period 1 
SEC16B                0.013   leucine zipper transcription regulator 2 
C20orf160             0.013   hypothetical protein LOC140706 
ANO8                  0.012   anoctamin 8 
LOC65998              0.012   hypothetical protein LOC65998 
SETD1B                0.012   SET domain containing 1B 
ARMC5                 0.012   armadillo repeat containing 5 isoform b 
ARMC5                 0.012   armadillo repeat containing 5 isoform a 
AEBP2                 0.012   AE binding protein 2 isoform b 
AEBP2                 0.012   AE binding protein 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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