Guide to the Human Genome
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Name: GPR162 Sequence: fasta or formatted (588aa) NCBI GI: 9951913
Description:

G protein-coupled receptor 162 isoform 2

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt prot [304aa] G protein-coupled receptor 162 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         51           2
 C cysteine            2.2         13           1
 D aspartate           3.6         21           3
 E glutamate           5.3         31           3
 F phenylalanine       3.9         23           2
 G glycine            10.4         61           5
 H histidine           1.9         11           1
 I isoleucine          3.7         22           2
 K lysine              2.4         14           2
 L leucine            11.9         70           4
 M methionine          1.9         11           1
 N asparagine          1.9         11           2
 P proline             6.6         39           2
 Q glutamine           2.9         17           2
 R arginine            7.8         46           2
 S serine              9.4         55           3
 T threonine           4.4         26           2
 V valine              6.5         38           2
 W tryptophan          2.6         15           1
 Y tyrosine            2.2         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 162 isoform 2 
GPR162                0.511   G protein-coupled receptor 162 isoform 1 
GPR153                0.376   G protein-coupled receptor 153 
HTR1A                 0.025   5-hydroxytryptamine (serotonin) receptor 1A 
HTR1E                 0.025   5-hydroxytryptamine (serotonin) receptor 1E 
ADRA2A                0.024   alpha-2A-adrenergic receptor 
ADRA2B                0.022   alpha-2B-adrenergic receptor 
OR10A6                0.021   olfactory receptor, family 10, subfamily A, member 6...
HTR1F                 0.021   5-hydroxytryptamine (serotonin) receptor 1F 
ADRA2C                0.021   alpha-2C-adrenergic receptor 
HTR1B                 0.020   5-hydroxytryptamine (serotonin) receptor 1B 
ADRA1B                0.019   alpha-1B-adrenergic receptor 
HRH3                  0.018   histamine receptor H3 
HTR6                  0.017   5-hydroxytryptamine (serotonin) receptor 6 
HTR1D                 0.017   5-hydroxytryptamine (serotonin) receptor 1D 
HRH1                  0.017   histamine receptor H1 
HRH1                  0.017   histamine receptor H1 
HRH1                  0.017   histamine receptor H1 
HRH1                  0.017   histamine receptor H1 
OR2T3                 0.017   olfactory receptor, family 2, subfamily T, member 3 ...
OR6Q1                 0.017   olfactory receptor, family 6, subfamily Q, member 1...
HTR7                  0.017   5-hydroxytryptamine receptor 7 isoform b 
HTR7                  0.017   5-hydroxytryptamine receptor 7 isoform d 
HTR7                  0.017   5-hydroxytryptamine receptor 7 isoform a 
MC1R                  0.017   melanocortin 1 receptor 
ADRA1A                0.017   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.017   alpha-1A-adrenergic receptor isoform 1 
ADRA1A                0.017   alpha-1A-adrenergic receptor isoform 2 
ADRA1A                0.017   alpha-1A-adrenergic receptor isoform 3 
TAAR1                 0.016   trace amine associated receptor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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