Guide to the Human Genome
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Name: ZXDC Sequence: fasta or formatted (710aa) NCBI GI: 98961138
Description:

ZXD family zinc finger C isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [858aa] ZXD family zinc finger C isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         69           3
 C cysteine            3.2         23           2
 D aspartate           4.2         30           3
 E glutamate           4.9         35           1
 F phenylalanine       3.5         25           1
 G glycine             9.6         68           3
 H histidine           4.2         30           1
 I isoleucine          1.5         11           1
 K lysine              4.2         30           2
 L leucine             9.9         70           3
 M methionine          1.1          8           1
 N asparagine          2.1         15           2
 P proline            10.0         71           3
 Q glutamine           3.7         26           2
 R arginine            5.9         42           3
 S serine             11.0         78           3
 T threonine           5.2         37           2
 V valine              4.6         33           1
 W tryptophan          0.3          2           1
 Y tyrosine            1.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ZXD family zinc finger C isoform 2 
ZXDC                  0.999   ZXD family zinc finger C isoform 1 
ZXDB                  0.555   zinc finger, X-linked, duplicated B 
ZXDA                  0.554   zinc finger, X-linked, duplicated A 
ZNF782                0.107   zinc finger protein 782 
ZNF235                0.107   zinc finger protein 93 homolog 
ZNF629                0.100   zinc finger protein 629 
ZNF182                0.099   zinc finger protein 21 isoform 2 
ZNF182                0.099   zinc finger protein 21 isoform 1 
ZNF408                0.099   zinc finger protein 408 
ZNF41                 0.098   zinc finger protein 41 
ZNF41                 0.098   zinc finger protein 41 
ZNF180                0.098   zinc finger protein 180 
ZNF425                0.098   zinc finger protein 425 
LOC100287429          0.097   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.097   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.097   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.097   zinc finger protein 84 
ZNF84                 0.097   zinc finger protein 84 
ZNF681                0.097   zinc finger protein 681 
ZFP37                 0.096   zinc finger protein 37 homolog 
ZFP62                 0.095   zinc finger protein 62 homolog 
ZNF143                0.095   zinc finger protein 143 
ZNF333                0.095   zinc finger protein 333 
ZNF544                0.095   zinc finger protein 544 
ZNF658                0.095   zinc finger protein 658 
ZNF267                0.094   zinc finger protein 267 
ZNF568                0.094   zinc finger protein 568 
ZNF835                0.094   zinc finger protein 835 
ZNF774                0.094   zinc finger protein 774 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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