Guide to the Human Genome
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Name: ANKRD13D Sequence: fasta or formatted (518aa) NCBI GI: 46409340
Description:

ankyrin repeat domain 13 family, member D

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         35           2
 C cysteine            1.0          5           1
 D aspartate           3.9         20           3
 E glutamate           9.8         51           3
 F phenylalanine       3.9         20           1
 G glycine             5.0         26           1
 H histidine           2.3         12           1
 I isoleucine          3.1         16           2
 K lysine              2.9         15           1
 L leucine            10.4         54           2
 M methionine          1.9         10           1
 N asparagine          2.7         14           1
 P proline             7.9         41           3
 Q glutamine           6.2         32           2
 R arginine            7.3         38           2
 S serine              8.3         43           2
 T threonine           6.2         32           1
 V valine              6.9         36           2
 W tryptophan          1.7          9           1
 Y tyrosine            1.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 13 family, member D 
ANKRD13B              0.624   ankyrin repeat domain 13B 
ANKRD13A              0.472   ankyrin repeat domain 13 
ANKRD13C              0.148   ankyrin repeat domain 13C 
EPN1                  0.017   epsin 1 isoform b 
ZNF579                0.017   zinc finger protein 579 
PELP1                 0.016   proline, glutamic acid and leucine rich protein 1 [...
ZC3H4                 0.014   zinc finger CCCH-type containing 4 
EFCAB4A               0.013   EF-hand calcium binding domain 4A 
DIDO1                 0.013   death inducer-obliterator 1 isoform c 
CCDC88B               0.013   coiled-coil domain containing 88 
TNIP1                 0.012   TNFAIP3 interacting protein 1 
SNAI1                 0.012   snail 1 homolog 
CDT1                  0.012   chromatin licensing and DNA replication factor 1 [H...
POLD1                 0.012   DNA-directed DNA polymerase delta 1 
DEF6                  0.011   differentially expressed in FDCP 6 homolog 
MAP7D1                0.011   MAP7 domain containing 1 
MLLT1                 0.010   myeloid/lymphoid or mixed-lineage leukemia (trithora...
PRKCSH                0.009   protein kinase C substrate 80K-H isoform 1 
EPN1                  0.009   epsin 1 isoform c 
EPN1                  0.009   epsin 1 isoform a 
C1orf96               0.009   hypothetical protein LOC126731 
ZNF853                0.009   zinc finger protein 853 
EPS15                 0.009   epidermal growth factor receptor pathway substrate ...
EPS15                 0.009   epidermal growth factor receptor pathway substrate 15...
PDZD4                 0.009   PDZ domain containing 4 
LOC100128074          0.008   PREDICTED: hypothetical protein 
ZNF469                0.008   zinc finger protein 469 
ITSN1                 0.008   intersectin 1 isoform ITSN-s 
ITSN1                 0.008   intersectin 1 isoform ITSN-l 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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