SYF2 30232

Name: SYF2	Sequence: fasta or formatted (201aa)		NCBI GI: 46371998
Description: SYF2 homolog, RNA splicing factor isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {243aa} SYF2 homolog, RNA splicing factor isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.4 23 4 C cysteine 0.5 1 1 D aspartate 6.5 13 2 E glutamate 12.9 26 2 F phenylalanine 3.0 6 2 G glycine 3.5 7 1 H histidine 2.5 5 1 I isoleucine 4.5 9 1 K lysine 9.5 19 3 L leucine 8.0 16 2 M methionine 2.0 4 1 N asparagine 3.5 7 1 P proline 2.5 5 1 Q glutamine 3.5 7 1 R arginine 10.4 21 3 S serine 4.5 9 1 T threonine 3.5 7 1 V valine 3.0 6 1 W tryptophan 0.5 1 1 Y tyrosine 4.5 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SYF2 homolog, RNA splicing factor isoform 2 SYF2 0.947 SYF2 homolog, RNA splicing factor isoform 1 EIF3A 0.043 eukaryotic translation initiation factor 3, subunit 1... ZC3H13 0.027 zinc finger CCCH-type containing 13 TCHH 0.024 trichohyalin CCDC19 0.024 nasopharyngeal epithelium specific protein 1 ERC1 0.021 RAB6-interacting protein 2 isoform epsilon ERC1 0.021 RAB6-interacting protein 2 isoform delta FAM133B 0.021 hypothetical protein LOC257415 isoform 2 FAM133B 0.021 hypothetical protein LOC257415 isoform 1 STX1A 0.021 syntaxin 1A (brain) SPTA1 0.021 spectrin, alpha, erythrocytic 1 NUP88 0.021 nucleoporin 88kDa HOOK3 0.021 golgi-associated microtubule-binding protein HOOK3 [... MYO6 0.019 myosin VI STX1B 0.019 syntaxin 1B RBM25 0.019 RNA binding motif protein 25 SPTAN1 0.019 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.019 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... TSGA10 0.019 testis specific, 10 TSGA10 0.019 testis specific, 10 SMC1B 0.019 SMC1 structural maintenance of chromosomes 1-like 2 ... LOC100133599 0.016 PREDICTED: hypothetical protein PRKCSH 0.016 protein kinase C substrate 80K-H isoform 2 PRKCSH 0.016 protein kinase C substrate 80K-H isoform 1 DHX16 0.016 DEAH (Asp-Glu-Ala-His) box polypeptide 16 LOC100133599 0.016 PREDICTED: hypothetical protein MINK1 0.016 misshapen/NIK-related kinase isoform 4 MINK1 0.016 misshapen/NIK-related kinase isoform 2 MINK1 0.016 misshapen/NIK-related kinase isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.