Guide to the Human Genome
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Name: RARRES1 Sequence: fasta or formatted (294aa) NCBI GI: 46255043
Description:

retinoic acid receptor responder (tazarotene induced) 1 isoform 1

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [228aa] retinoic acid receptor responder (tazarotene induced) 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         20           2
 C cysteine            1.7          5           1
 D aspartate           4.1         12           2
 E glutamate           6.5         19           2
 F phenylalanine       3.1          9           2
 G glycine             5.8         17           1
 H histidine           2.7          8           1
 I isoleucine          3.7         11           2
 K lysine              5.1         15           3
 L leucine            11.6         34           5
 M methionine          1.4          4           1
 N asparagine          3.1          9           1
 P proline             8.8         26           1
 Q glutamine           6.5         19           2
 R arginine            6.8         20           2
 S serine              6.1         18           2
 T threonine           5.1         15           2
 V valine              6.1         18           2
 W tryptophan          2.0          6           1
 Y tyrosine            3.1          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   retinoic acid receptor responder (tazarotene induced... 
RARRES1               0.751   retinoic acid receptor responder (tazarotene induced...
LXN                   0.170   latexin 
B4GALNT4              0.022   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
CABP1                 0.017   calcium binding protein 1 isoform 3 
NTN3                  0.017   netrin 3 
COL7A1                0.015   alpha 1 type VII collagen precursor 
MXRA7                 0.015   transmembrane anchor protein 1 isoform 3 
MXRA7                 0.015   transmembrane anchor protein 1 isoform 2 
MXRA7                 0.015   transmembrane anchor protein 1 isoform 1 
COL9A3                0.014   alpha 3 type IX collagen 
NUCB1                 0.014   nucleobindin 1 
SCMH1                 0.014   sex comb on midleg 1 isoform 1 
SCMH1                 0.014   sex comb on midleg 1 isoform 2 
ADAMTS8               0.014   ADAM metallopeptidase with thrombospondin type 1 mo...
MYO15A                0.012   myosin XV 
WASL                  0.012   Wiskott-Aldrich syndrome gene-like protein 
GLT25D1               0.012   glycosyltransferase 25 domain containing 1 
MBNL1                 0.012   muscleblind-like 1 isoform f 
TBC1D9                0.012   TBC1 domain family, member 9 (with GRAM domain) [Ho...
YAP1                  0.012   Yes-associated protein 1, 65kDa isoform 2 
YAP1                  0.012   Yes-associated protein 1, 65kDa isoform 1 
RIMBP3                0.012   DKFZP434H0735 protein 
PAK4                  0.012   p21-activated kinase 4 isoform 1 
PAK4                  0.012   p21-activated kinase 4 isoform 2 
PAK4                  0.012   p21-activated kinase 4 isoform 2 
PAK4                  0.012   p21-activated kinase 4 isoform 1 
PAK4                  0.012   p21-activated kinase 4 isoform 1 
ASTN2                 0.010   astrotactin 2 isoform c 
ASTN2                 0.010   astrotactin 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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