Guide to the Human Genome
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Name: MBNL1 Sequence: fasta or formatted (340aa) NCBI GI: 46411172
Description:

muscleblind-like 1 isoform f

Referenced in:

Muscle

Other entries for this name:
alt prot [382aa] muscleblind-like 1 isoform a
alt prot [370aa] muscleblind-like 1 isoform b
alt prot [388aa] muscleblind-like 1 isoform c
alt prot [302aa] muscleblind-like 1 isoform d
alt prot [314aa] muscleblind-like 1 isoform e
alt prot [342aa] muscleblind-like 1 isoform g
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.2         45           7
 C cysteine            4.7         16           1
 D aspartate           2.9         10           1
 E glutamate           3.5         12           1
 F phenylalanine       2.6          9           1
 G glycine             3.8         13           1
 H histidine           2.6          9           1
 I isoleucine          3.5         12           2
 K lysine              4.4         15           1
 L leucine             7.6         26           2
 M methionine          4.1         14           2
 N asparagine          4.7         16           2
 P proline             9.7         33           3
 Q glutamine           7.4         25           3
 R arginine            5.0         17           1
 S serine              5.6         19           1
 T threonine           6.2         21           1
 V valine              5.6         19           1
 W tryptophan          0.6          2           1
 Y tyrosine            2.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   muscleblind-like 1 isoform f 
MBNL1                 0.822   muscleblind-like 1 isoform b 
MBNL1                 0.815   muscleblind-like 1 isoform a 
MBNL1                 0.814   muscleblind-like 1 isoform c 
MBNL1                 0.783   muscleblind-like 1 isoform g 
MBNL2                 0.593   muscleblind-like 2 isoform 3 
MBNL2                 0.593   muscleblind-like 2 isoform 1 
MBNL3                 0.533   muscleblind-like 3 isoform R 
MBNL3                 0.527   muscleblind-like 3 isoform G 
MBNL1                 0.413   muscleblind-like 1 isoform d 
MBNL1                 0.405   muscleblind-like 1 isoform e 
ZC3H3                 0.031   zinc finger CCCH-type containing 3 
ZC3H10                0.028   zinc finger CCCH-type containing 10 
CPSF4L                0.028   cleavage and polyadenylation specific factor 4-like...
ZFP36                 0.018   zinc finger protein 36, C3H type, homolog 
LOC100290519          0.018   PREDICTED: hypothetical protein XP_002346939 
PRDM16                0.018   PR domain containing 16 isoform 2 
PRDM16                0.018   PR domain containing 16 isoform 1 
LIX1L                 0.018   Lix1 homolog (mouse) like 
MKRN3                 0.018   makorin ring finger protein 3 
CPSF4                 0.018   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.018   cleavage and polyadenylation specific factor 4, 30kDa...
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
BHLHE41               0.016   basic helix-loop-helix domain containing, class B, 3...
CEBPB                 0.016   CCAAT/enhancer binding protein beta 
ARID3A                0.016   AT rich interactive domain 3A (BRIGHT- like) protein ...
AMOT                  0.016   angiomotin isoform 2 
AMOT                  0.016   angiomotin isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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