Guide to the Human Genome
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Name: PAK4 Sequence: fasta or formatted (591aa) NCBI GI: 5031975
Description:

p21-activated kinase 4 isoform 1

Referenced in:

Rho and Rac

Other entries for this name:
alt mRNA [591aa] p21-activated kinase 4 isoform 1
alt mRNA [591aa] p21-activated kinase 4 isoform 1
alt prot [438aa] p21-activated kinase 4 isoform 2
alt prot [438aa] p21-activated kinase 4 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         52           2
 C cysteine            0.8          5           1
 D aspartate           4.6         27           1
 E glutamate           5.9         35           2
 F phenylalanine       2.7         16           1
 G glycine             9.1         54           3
 H histidine           2.5         15           1
 I isoleucine          3.7         22           1
 K lysine              4.9         29           2
 L leucine             8.1         48           3
 M methionine          2.4         14           1
 N asparagine          2.5         15           1
 P proline            10.7         63           4
 Q glutamine           4.1         24           2
 R arginine            8.8         52           3
 S serine              8.1         48           6
 T threonine           3.7         22           2
 V valine              6.4         38           2
 W tryptophan          0.7          4           1
 Y tyrosine            1.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   p21-activated kinase 4 isoform 1 
PAK4                  1.000   p21-activated kinase 4 isoform 1 
PAK4                  1.000   p21-activated kinase 4 isoform 1 
PAK4                  0.617   p21-activated kinase 4 isoform 2 
PAK4                  0.617   p21-activated kinase 4 isoform 2 
PAK6                  0.447   p21-activated kinase 6 
PAK6                  0.447   p21-activated kinase 6 
PAK6                  0.447   p21-activated kinase 6 
PAK7                  0.425   p21-activated kinase 7 
PAK7                  0.425   p21-activated kinase 7 
PAK2                  0.254   p21-activated kinase 2 
PAK3                  0.251   p21-activated kinase 3 isoform d 
PAK3                  0.251   p21-activated kinase 3 isoform c 
PAK3                  0.251   p21-activated kinase 3 isoform b 
PAK3                  0.251   p21-activated kinase 3 isoform a 
PAK3                  0.251   p21-activated kinase 3 isoform a 
PAK3                  0.251   p21-activated kinase 3 isoform a 
PAK1                  0.247   p21-activated kinase 1 isoform 2 
PAK1                  0.235   p21-activated kinase 1 isoform 1 
STK3                  0.150   serine/threonine kinase 3 
STK4                  0.149   serine/threonine kinase 4 
MAP4K3                0.143   mitogen-activated protein kinase kinase kinase kinas...
STK24                 0.140   serine/threonine kinase 24 isoform b 
STK24                 0.140   serine/threonine kinase 24 isoform a 
MST4                  0.140   serine/threonine protein kinase MST4 isoform 1 [Homo...
MAP4K1                0.139   mitogen-activated protein kinase kinase kinase kina...
MAP4K1                0.139   mitogen-activated protein kinase kinase kinase kinase...
MAP4K2                0.138   mitogen-activated protein kinase kinase kinase kinas...
TNIK                  0.138   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.138   TRAF2 and NCK interacting kinase isoform 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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