Guide to the Human Genome
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Name: YAP1 Sequence: fasta or formatted (454aa) NCBI GI: 5174751
Description:

Yes-associated protein 1, 65kDa isoform 2

Referenced in:

Non-Receptor Tyrosine Kinase Pathways
WW Domain

Other entries for this name:
alt prot [504aa] Yes-associated protein 1, 65kDa isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         34           2
 C cysteine            0.0          0           0
 D aspartate           5.3         24           2
 E glutamate           4.6         21           2
 F phenylalanine       2.0          9           2
 G glycine             7.0         32           2
 H histidine           1.8          8           1
 I isoleucine          1.8          8           1
 K lysine              2.4         11           1
 L leucine             8.6         39           2
 M methionine          4.2         19           2
 N asparagine          4.2         19           1
 P proline            12.1         55           3
 Q glutamine          10.8         49           4
 R arginine            4.2         19           1
 S serine             10.4         47           2
 T threonine           7.3         33           3
 V valine              4.4         20           2
 W tryptophan          0.7          3           1
 Y tyrosine            0.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Yes-associated protein 1, 65kDa isoform 2 
YAP1                  0.962   Yes-associated protein 1, 65kDa isoform 1 
WWTR1                 0.357   WW domain containing transcription regulator 1 [Homo...
BRD4                  0.039   bromodomain-containing protein 4 isoform long 
EP400                 0.036   E1A binding protein p400 
WWP2                  0.034   WW domain containing E3 ubiquitin protein ligase 2 i...
HCN2                  0.030   hyperpolarization activated cyclic nucleotide-gated...
ESPN                  0.030   espin 
MAGI1                 0.030   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.030   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.030   membrane associated guanylate kinase, WW and PDZ dom...
SMURF1                0.029   Smad ubiquitination regulatory factor 1 isoform 1 [H...
PCLO                  0.028   piccolo isoform 2 
PCLO                  0.028   piccolo isoform 1 
MED12                 0.028   mediator complex subunit 12 
RFX1                  0.027   regulatory factor X1 
MAGI2                 0.027   membrane associated guanylate kinase, WW and PDZ dom...
HECW1                 0.027   NEDD4-like ubiquitin-protein ligase 1 
ARID1A                0.027   AT rich interactive domain 1A isoform a 
ARID1A                0.027   AT rich interactive domain 1A isoform b 
SYN1                  0.027   synapsin I isoform Ia 
SYN1                  0.027   synapsin I isoform Ib 
FAM48B1               0.027   hypothetical protein LOC100130302 
AAK1                  0.027   AP2 associated kinase 1 
NEDD4L                0.026   neural precursor cell expressed, developmentally do...
NEDD4L                0.026   neural precursor cell expressed, developmentally do...
NEDD4L                0.026   neural precursor cell expressed, developmentally do...
NEDD4L                0.026   neural precursor cell expressed, developmentally do...
NEDD4L                0.026   neural precursor cell expressed, developmentally do...
RBM27                 0.026   RNA binding motif protein 27 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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