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Search of human proteins with 45827723
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45827723 hypothetical protein LOC25895 isoform b [Homo
sapiens]
(149 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens] 310 3e-85
gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens] 199 7e-52
gi|188528686 hypothetical protein LOC151194 [Homo sapiens] 71 4e-13
gi|188528684 hypothetical protein LOC151194 [Homo sapiens] 71 4e-13
gi|58293779 hypothetical protein LOC196541 [Homo sapiens] 49 2e-06
gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens] 47 6e-06
gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens] 47 6e-06
gi|15553097 hypothetical protein MGC9084 [Homo sapiens] 44 5e-05
gi|94536786 hypothetical protein LOC79091 [Homo sapiens] 40 0.001
gi|126012513 hypothetical protein LOC124512 [Homo sapiens] 37 0.005
gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens] 33 0.12
gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens] 33 0.12
gi|212549593 hypothetical protein LOC653333 [Homo sapiens] 32 0.15
gi|209529731 hypothetical protein LOC254013 [Homo sapiens] 32 0.15
gi|209529729 hypothetical protein LOC254013 [Homo sapiens] 32 0.15
gi|28603834 hypothetical protein LOC254013 [Homo sapiens] 32 0.15
gi|134133220 hypothetical protein LOC85002 [Homo sapiens] 32 0.15
gi|227908867 protein arginine methyltransferase 6 [Homo sapiens] 32 0.20
gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo sap... 32 0.26
gi|223556010 protein arginine methyltransferase 3 isoform 3 [Hom... 31 0.34
gi|223556008 protein arginine methyltransferase 3 isoform 2 [Hom... 31 0.34
gi|44771198 protein arginine methyltransferase 3 isoform 1 [Homo... 31 0.34
gi|40288288 coactivator-associated arginine methyltransferase 1 ... 29 1.3
gi|74099699 HMT1 hnRNP methyltransferase-like 4 [Homo sapiens] 29 1.3
gi|32455239 11-beta-hydroxysteroid dehydrogenase 1 [Homo sapiens] 29 1.7
gi|5031765 11-beta-hydroxysteroid dehydrogenase 1 [Homo sapiens] 29 1.7
gi|154759421 HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo... 28 2.9
gi|151301219 HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo... 28 2.9
gi|150456457 HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo... 28 2.9
gi|40538772 protein arginine methyltransferase 10 (putative) [Ho... 28 2.9
>gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens]
Length = 149
Score = 310 bits (794), Expect = 3e-85
Identities = 149/149 (100%), Positives = 149/149 (100%)
Query: 1 MADPGPDPESESESVFPREVGLFADSYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAA 60
MADPGPDPESESESVFPREVGLFADSYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAA
Sbjct: 1 MADPGPDPESESESVFPREVGLFADSYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAA 60
Query: 61 LSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGAYGLVRETEDDVIEQELWRGMRG 120
LSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGAYGLVRETEDDVIEQELWRGMRG
Sbjct: 61 LSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGAYGLVRETEDDVIEQELWRGMRG 120
Query: 121 ACGHALSMSTMTPWESIKGSSVRGGCYHH 149
ACGHALSMSTMTPWESIKGSSVRGGCYHH
Sbjct: 121 ACGHALSMSTMTPWESIKGSSVRGGCYHH 149
>gi|45827721 hypothetical protein LOC25895 isoform a [Homo
sapiens]
Length = 226
Score = 199 bits (506), Expect = 7e-52
Identities = 97/97 (100%), Positives = 97/97 (100%)
Query: 1 MADPGPDPESESESVFPREVGLFADSYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAA 60
MADPGPDPESESESVFPREVGLFADSYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAA
Sbjct: 1 MADPGPDPESESESVFPREVGLFADSYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAA 60
Query: 61 LSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQG 97
LSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQG
Sbjct: 61 LSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQG 97
>gi|188528686 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 70.9 bits (172), Expect = 4e-13
Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 33 FCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGIL 92
F F H + I Q++ LGVAA VWDAA+ L Y E V+ RG+ +ELGAGTG+VGI+
Sbjct: 24 FSFANHTIQIRQDW-RHLGVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82
Query: 93 AALQGAY 99
AAL GA+
Sbjct: 83 AALLGAH 89
>gi|188528684 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 70.9 bits (172), Expect = 4e-13
Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 33 FCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGIL 92
F F H + I Q++ LGVAA VWDAA+ L Y E V+ RG+ +ELGAGTG+VGI+
Sbjct: 24 FSFANHTIQIRQDW-RHLGVAAVVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIV 82
Query: 93 AALQGAY 99
AAL GA+
Sbjct: 83 AALLGAH 89
>gi|58293779 hypothetical protein LOC196541 [Homo sapiens]
Length = 264
Score = 48.9 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 26 SYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFE--SQNVDFRGKKVIELG 83
SY+++ + F G + I ++ S A VW A++LC Y E ++ ++F+ K++E+G
Sbjct: 65 SYTQE-HYRFAGKEIVIQESIES---YGAVVWPGAMALCQYLEEHAEELNFQDAKILEIG 120
Query: 84 AGTGIVGILAALQGA 98
AG G+V I+A++ GA
Sbjct: 121 AGPGLVSIVASILGA 135
>gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens]
Length = 194
Score = 47.0 bits (110), Expect = 6e-06
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 37 GHVLTITQNFGSRLGVAARVWDAALSLCNYFESQNVDFRG------KKVIELGAGTGIVG 90
G VL + Q S GV VWDAA+ L Y E+ G + V+ELG+GTG VG
Sbjct: 25 GTVLRLQQY--SSGGVGCVVWDAAIVLSKYLETPEFSGDGAHALSRRSVLELGSGTGAVG 82
Query: 91 ILAALQGAYGLVRETED 107
++AA GA +V + E+
Sbjct: 83 LMAATLGADVVVTDLEE 99
>gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens]
Length = 229
Score = 47.0 bits (110), Expect = 6e-06
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 37 GHVLTITQNFGSRLGVAARVWDAALSLCNYFESQNVDFRG------KKVIELGAGTGIVG 90
G VL + Q S GV VWDAA+ L Y E+ G + V+ELG+GTG VG
Sbjct: 25 GTVLRLQQY--SSGGVGCVVWDAAIVLSKYLETPEFSGDGAHALSRRSVLELGSGTGAVG 82
Query: 91 ILAALQGAYGLVRETED 107
++AA GA +V + E+
Sbjct: 83 LMAATLGADVVVTDLEE 99
>gi|15553097 hypothetical protein MGC9084 [Homo sapiens]
Length = 372
Score = 43.9 bits (102), Expect = 5e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 55 RVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGA 98
++W+ L YF V F GKKV++LG G+G++GI A G+
Sbjct: 167 KIWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGITAFKGGS 210
>gi|94536786 hypothetical protein LOC79091 [Homo sapiens]
Length = 404
Score = 39.7 bits (91), Expect = 0.001
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 52 VAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAA 94
V +VW AL L +Y + FRG +ELGAGTG+ I+AA
Sbjct: 182 VGKQVWRGALLLADYILFRQDLFRGCTALELGAGTGLASIIAA 224
>gi|126012513 hypothetical protein LOC124512 [Homo sapiens]
Length = 190
Score = 37.4 bits (85), Expect = 0.005
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 56 VWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGAYGLVRETED 107
VW A+ L Y GK ++E+GAG + GILAA GA ++ ++ +
Sbjct: 3 VWPCAVVLAQYLWFHRRSLPGKAILEIGAGVSLPGILAAKCGAEVILSDSSE 54
>gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens]
Length = 296
Score = 32.7 bits (73), Expect = 0.12
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI 91
WDAAL L + F + V+ELG+G G+ G+
Sbjct: 105 WDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGL 139
>gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens]
Length = 330
Score = 32.7 bits (73), Expect = 0.12
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI 91
WDAAL L + F + V+ELG+G G+ G+
Sbjct: 139 WDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGL 173
>gi|212549593 hypothetical protein LOC653333 [Homo sapiens]
Length = 330
Score = 32.3 bits (72), Expect = 0.15
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI 91
WDAAL L + F + V+ELG+G G+ G+
Sbjct: 139 WDAALYLAEWAIENPAAFINRTVLELGSGAGLTGL 173
>gi|209529731 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 32.3 bits (72), Expect = 0.15
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGAYGLVRETEDDV 109
W +L Y RGK V++LG+G G I A + GA ++ D +
Sbjct: 97 WPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIAAKMSGASRILANDIDPI 149
>gi|209529729 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 32.3 bits (72), Expect = 0.15
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGAYGLVRETEDDV 109
W +L Y RGK V++LG+G G I A + GA ++ D +
Sbjct: 97 WPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIAAKMSGASRILANDIDPI 149
>gi|28603834 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 32.3 bits (72), Expect = 0.15
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGAYGLVRETEDDV 109
W +L Y RGK V++LG+G G I A + GA ++ D +
Sbjct: 97 WPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIAAKMSGASRILANDIDPI 149
>gi|134133220 hypothetical protein LOC85002 [Homo sapiens]
Length = 296
Score = 32.3 bits (72), Expect = 0.15
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI 91
WDAAL L + F + V+ELG+G G+ G+
Sbjct: 105 WDAALYLAEWAIENPAAFINRTVLELGSGAGLTGL 139
>gi|227908867 protein arginine methyltransferase 6 [Homo sapiens]
Length = 375
Score = 32.0 bits (71), Expect = 0.20
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 75 RGKKVIELGAGTGIVGILAALQGA 98
RGK V+++GAGTGI+ I A GA
Sbjct: 82 RGKTVLDVGAGTGILSIFCAQAGA 105
>gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo
sapiens]
Length = 329
Score = 31.6 bits (70), Expect = 0.26
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 51 GVAARV-WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI 91
G RV WD AL L + F + V+ELG+G G+ G+
Sbjct: 132 GTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGL 173
>gi|223556010 protein arginine methyltransferase 3 isoform 3 [Homo
sapiens]
Length = 454
Score = 31.2 bits (69), Expect = 0.34
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 74 FRGKKVIELGAGTGIVGILAALQGAYGLVRETEDDVIEQEL 114
F+ K V+++G GTGI+ + AA GA ++ + +++ Q +
Sbjct: 177 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAM 217
>gi|223556008 protein arginine methyltransferase 3 isoform 2 [Homo
sapiens]
Length = 469
Score = 31.2 bits (69), Expect = 0.34
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 74 FRGKKVIELGAGTGIVGILAALQGAYGLVRETEDDVIEQEL 114
F+ K V+++G GTGI+ + AA GA ++ + +++ Q +
Sbjct: 192 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAM 232
>gi|44771198 protein arginine methyltransferase 3 isoform 1 [Homo
sapiens]
Length = 531
Score = 31.2 bits (69), Expect = 0.34
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 74 FRGKKVIELGAGTGIVGILAALQGAYGLVRETEDDVIEQEL 114
F+ K V+++G GTGI+ + AA GA ++ + +++ Q +
Sbjct: 254 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAM 294
>gi|40288288 coactivator-associated arginine methyltransferase 1
[Homo sapiens]
Length = 608
Score = 29.3 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 71 NVDFRGKKVIELGAGTGIVGILAALQGA 98
+ DF+ K V+++G G+GI+ AA GA
Sbjct: 180 HTDFKDKIVLDVGCGSGILSFFAAQAGA 207
>gi|74099699 HMT1 hnRNP methyltransferase-like 4 [Homo sapiens]
Length = 394
Score = 29.3 bits (64), Expect = 1.3
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 74 FRGKKVIELGAGTGIVGILAALQGA 98
F+ K V+++G+GTGI+ + AA GA
Sbjct: 110 FKDKVVLDVGSGTGILSMFAAKAGA 134
>gi|32455239 11-beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]
Length = 292
Score = 28.9 bits (63), Expect = 1.7
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 61 LSLCNYFESQNVDFR-----GKKVIELGAGTGIVGILA---ALQGAYGLV----RETEDD 108
L + Y+ S N +FR GKKVI GA GI +A A GA+ +V +ET
Sbjct: 14 LFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQK 73
Query: 109 VIEQELWRGMRGACGHALSMSTMT 132
V+ L G A A +M MT
Sbjct: 74 VVSHCLELGAASAHYIAGTMEDMT 97
>gi|5031765 11-beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]
Length = 292
Score = 28.9 bits (63), Expect = 1.7
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 61 LSLCNYFESQNVDFR-----GKKVIELGAGTGIVGILA---ALQGAYGLV----RETEDD 108
L + Y+ S N +FR GKKVI GA GI +A A GA+ +V +ET
Sbjct: 14 LFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQK 73
Query: 109 VIEQELWRGMRGACGHALSMSTMT 132
V+ L G A A +M MT
Sbjct: 74 VVSHCLELGAASAHYIAGTMEDMT 97
>gi|154759421 HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo
sapiens]
Length = 371
Score = 28.1 bits (61), Expect = 2.9
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 74 FRGKKVIELGAGTGIVGILAALQGA 98
F+ K V+++G+GTGI+ + AA GA
Sbjct: 87 FKDKVVLDVGSGTGILCMFAAKAGA 111
>gi|151301219 HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo
sapiens]
Length = 353
Score = 28.1 bits (61), Expect = 2.9
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 74 FRGKKVIELGAGTGIVGILAALQGA 98
F+ K V+++G+GTGI+ + AA GA
Sbjct: 69 FKDKVVLDVGSGTGILCMFAAKAGA 93
>gi|150456457 HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo
sapiens]
Length = 347
Score = 28.1 bits (61), Expect = 2.9
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 74 FRGKKVIELGAGTGIVGILAALQGA 98
F+ K V+++G+GTGI+ + AA GA
Sbjct: 63 FKDKVVLDVGSGTGILCMFAAKAGA 87
>gi|40538772 protein arginine methyltransferase 10 (putative) [Homo
sapiens]
Length = 845
Score = 28.1 bits (61), Expect = 2.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 77 KKVIELGAGTGIVGILAALQGAYGL 101
K V+++GAGTGI+ + A GA+ +
Sbjct: 179 KSVLDIGAGTGILSMFAKKAGAHSV 203
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,938,309
Number of Sequences: 37866
Number of extensions: 221130
Number of successful extensions: 536
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 501
Number of HSP's gapped (non-prelim): 36
length of query: 149
length of database: 18,247,518
effective HSP length: 93
effective length of query: 56
effective length of database: 14,725,980
effective search space: 824654880
effective search space used: 824654880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.