Guide to the Human Genome
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Name: PRMT1 Sequence: fasta or formatted (347aa) NCBI GI: 150456457
Description:

HMT1 hnRNP methyltransferase-like 2 isoform 2

Referenced in:

Interferon
Additional Protein Modifications
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [353aa] HMT1 hnRNP methyltransferase-like 2 isoform 3
alt prot [371aa] HMT1 hnRNP methyltransferase-like 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         19           2
 C cysteine            2.9         10           1
 D aspartate           7.8         27           1
 E glutamate           7.2         25           2
 F phenylalanine       4.9         17           1
 G glycine             4.9         17           1
 H histidine           2.6          9           1
 I isoleucine          6.3         22           3
 K lysine              7.8         27           1
 L leucine             6.9         24           1
 M methionine          3.2         11           1
 N asparagine          3.5         12           2
 P proline             2.9         10           1
 Q glutamine           1.7          6           1
 R arginine            4.0         14           1
 S serine              5.5         19           2
 T threonine           6.3         22           1
 V valine              9.2         32           2
 W tryptophan          1.4          5           2
 Y tyrosine            5.5         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo... 
PRMT1                 0.987   HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo...
PRMT1                 0.987   HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo...
PRMT8                 0.829   HMT1 hnRNP methyltransferase-like 4 
PRMT3                 0.438   protein arginine methyltransferase 3 isoform 3 [Hom...
PRMT3                 0.438   protein arginine methyltransferase 3 isoform 2 [Hom...
PRMT3                 0.438   protein arginine methyltransferase 3 isoform 1 [Homo...
PRMT2                 0.268   HMT1 hnRNP methyltransferase-like 1 
PRMT2                 0.268   HMT1 hnRNP methyltransferase-like 1 
PRMT6                 0.239   protein arginine methyltransferase 6 
CARM1                 0.233   coactivator-associated arginine methyltransferase 1 ...
PRMT10                0.072   protein arginine methyltransferase 10 (putative) [Ho...
PRMT7                 0.048   protein arginine methyltransferase 7 
C14orf138             0.020   hypothetical protein LOC79609 isoform b 
C14orf138             0.020   hypothetical protein LOC79609 isoform a 
C1orf156              0.013   hypothetical protein MGC9084 
C12orf72              0.012   hypothetical protein LOC254013 
C12orf72              0.012   hypothetical protein LOC254013 
C12orf72              0.012   hypothetical protein LOC254013 
METTL10               0.007   methyltransferase like 10 
POLM                  0.007   DNA-directed DNA polymerase mu 
C17orf95              0.007   hypothetical protein LOC124512 
PRMT5                 0.006   protein arginine methyltransferase 5 isoform b [Homo...
PRMT5                 0.006   protein arginine methyltransferase 5 isoform a [Homo...
THUMPD2               0.006   THUMP domain containing 2 
FAM83A                0.006   hypothetical protein LOC84985 isoform b 
FAM83A                0.006   hypothetical protein LOC84985 isoform a 
VPS13D                0.006   vacuolar protein sorting 13D isoform 2 
METTL5                0.006   methyltransferase like 5 
VPS13D                0.006   vacuolar protein sorting 13D isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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