Guide to the Human Genome
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Name: PRMT8 Sequence: fasta or formatted (394aa) NCBI GI: 74099699
Description:

HMT1 hnRNP methyltransferase-like 4

Referenced in:

Additional Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         21           2
 C cysteine            2.5         10           1
 D aspartate           6.3         25           1
 E glutamate           6.9         27           2
 F phenylalanine       4.8         19           1
 G glycine             4.6         18           2
 H histidine           3.0         12           2
 I isoleucine          5.8         23           3
 K lysine              8.4         33           2
 L leucine             6.6         26           3
 M methionine          4.1         16           1
 N asparagine          3.8         15           1
 P proline             4.6         18           2
 Q glutamine           2.5         10           1
 R arginine            4.1         16           2
 S serine              6.3         25           2
 T threonine           5.6         22           1
 V valine              8.6         34           2
 W tryptophan          1.3          5           2
 Y tyrosine            4.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HMT1 hnRNP methyltransferase-like 4 
PRMT1                 0.731   HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo...
PRMT1                 0.728   HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo...
PRMT1                 0.728   HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo...
PRMT3                 0.368   protein arginine methyltransferase 3 isoform 3 [Hom...
PRMT3                 0.368   protein arginine methyltransferase 3 isoform 2 [Hom...
PRMT3                 0.368   protein arginine methyltransferase 3 isoform 1 [Homo...
PRMT2                 0.230   HMT1 hnRNP methyltransferase-like 1 
PRMT2                 0.230   HMT1 hnRNP methyltransferase-like 1 
PRMT6                 0.217   protein arginine methyltransferase 6 
CARM1                 0.202   coactivator-associated arginine methyltransferase 1 ...
PRMT10                0.055   protein arginine methyltransferase 10 (putative) [Ho...
PRMT7                 0.036   protein arginine methyltransferase 7 
C1orf156              0.018   hypothetical protein MGC9084 
C14orf138             0.011   hypothetical protein LOC79609 isoform b 
C14orf138             0.011   hypothetical protein LOC79609 isoform a 
METTL10               0.010   methyltransferase like 10 
SETD2                 0.009   SET domain containing 2 
C12orf26              0.009   hypothetical protein LOC84190 
EP300                 0.008   E1A binding protein p300 
DOCK4                 0.008   dedicator of cytokinesis 4 
C12orf72              0.008   hypothetical protein LOC254013 
C12orf72              0.008   hypothetical protein LOC254013 
C12orf72              0.008   hypothetical protein LOC254013 
YEATS2                0.006   YEATS domain containing 2 
THUMPD2               0.006   THUMP domain containing 2 
CCNK                  0.006   cyclin K isoform 1 
C8A                   0.005   complement component 8, alpha polypeptide precursor [...
KIAA1543              0.005   NEZHA isoform 2 
KIAA1543              0.005   NEZHA isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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