Guide to the Human Genome
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Search of human proteins with 45827708

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45827708 quaking homolog, KH domain RNA binding isoform
HQK-6 [Homo sapiens]
         (319 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6...   640   0.0  
gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7...   627   e-180
gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5...   625   e-179
gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7...   623   e-179
gi|189217895 KH domain-containing, RNA-binding, signal transduct...   141   9e-34
gi|5730073 KH domain containing, RNA binding, signal transductio...   137   1e-32
gi|5730027 KH domain containing, RNA binding, signal transductio...   134   1e-31
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]                100   2e-21
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]                100   2e-21
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]                100   2e-21
gi|55741675 hypothetical protein LOC22889 [Homo sapiens]               44   1e-04
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s...    40   0.003
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ...    40   0.003
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ...    40   0.003
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s...    40   0.003
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    39   0.005
gi|93004092 nuclear factor I/B [Homo sapiens]                          39   0.006
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    38   0.014
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo...    38   0.014
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo...    38   0.014
gi|40353729 Ras and Rab interactor 3 [Homo sapiens]                    37   0.018
gi|38788260 bromodomain PHD finger transcription factor isoform ...    37   0.023
gi|38788274 bromodomain PHD finger transcription factor isoform ...    37   0.023
gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]              37   0.023
gi|163965366 nascent polypeptide-associated complex alpha subuni...    37   0.023
gi|19111150 angiomotin isoform 2 [Homo sapiens]                        36   0.040
gi|166064029 angiomotin isoform 1 [Homo sapiens]                       36   0.040
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]                    36   0.040
gi|160707881 formin 2 [Homo sapiens]                                   35   0.068
gi|139394646 iroquois homeobox protein 5 [Homo sapiens]                35   0.068

>gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6
           [Homo sapiens]
          Length = 319

 Score =  640 bits (1651), Expect = 0.0
 Identities = 319/319 (100%), Positives = 319/319 (100%)

Query: 1   MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60
           MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
Sbjct: 1   MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60

Query: 61  LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120
           LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK
Sbjct: 61  LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120

Query: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180
           IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV
Sbjct: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180

Query: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240
           PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA
Sbjct: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240

Query: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300
           LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI
Sbjct: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300

Query: 301 LEYPIEPSGVLGMAFPTKG 319
           LEYPIEPSGVLGMAFPTKG
Sbjct: 301 LEYPIEPSGVLGMAFPTKG 319


>gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7B
           [Homo sapiens]
          Length = 319

 Score =  627 bits (1617), Expect = e-180
 Identities = 314/319 (98%), Positives = 314/319 (98%)

Query: 1   MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60
           MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
Sbjct: 1   MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60

Query: 61  LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120
           LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK
Sbjct: 61  LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120

Query: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180
           IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV
Sbjct: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180

Query: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240
           PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA
Sbjct: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240

Query: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300
           LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI
Sbjct: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300

Query: 301 LEYPIEPSGVLGMAFPTKG 319
           LEYPIEPSGVLG  F   G
Sbjct: 301 LEYPIEPSGVLGKFFSPWG 319


>gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5
           [Homo sapiens]
          Length = 341

 Score =  625 bits (1613), Expect = e-179
 Identities = 312/312 (100%), Positives = 312/312 (100%)

Query: 1   MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60
           MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
Sbjct: 1   MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60

Query: 61  LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120
           LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK
Sbjct: 61  LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120

Query: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180
           IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV
Sbjct: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180

Query: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240
           PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA
Sbjct: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240

Query: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300
           LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI
Sbjct: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300

Query: 301 LEYPIEPSGVLG 312
           LEYPIEPSGVLG
Sbjct: 301 LEYPIEPSGVLG 312


>gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7
           [Homo sapiens]
          Length = 325

 Score =  623 bits (1607), Expect = e-179
 Identities = 311/311 (100%), Positives = 311/311 (100%)

Query: 1   MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60
           MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
Sbjct: 1   MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60

Query: 61  LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120
           LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK
Sbjct: 61  LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120

Query: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180
           IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV
Sbjct: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180

Query: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240
           PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA
Sbjct: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240

Query: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300
           LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI
Sbjct: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300

Query: 301 LEYPIEPSGVL 311
           LEYPIEPSGVL
Sbjct: 301 LEYPIEPSGVL 311


>gi|189217895 KH domain-containing, RNA-binding, signal
           transduction-associated protein 2 [Homo sapiens]
          Length = 349

 Score =  141 bits (355), Expect = 9e-34
 Identities = 103/287 (35%), Positives = 148/287 (51%), Gaps = 33/287 (11%)

Query: 17  YLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAV 76
           YL +LM +K  +   P+F     H  RLL EEI + +        +G  E    +  D +
Sbjct: 6   YLPELMAEKDSLD--PSFV----HASRLLAEEIEKFQGS------DGKKEDEEKKYLDVI 53

Query: 77  G-PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135
               ++L E++ +PVK+YP FNFVG++LGPRG + K+L+ ETG K+ + GKGSMRDK KE
Sbjct: 54  SNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKE 113

Query: 136 EQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQ 193
           E+ R  G+  + HL+++LHVLI V      A  ++  A+EE+KK LVP  +  D +++ Q
Sbjct: 114 EELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQ 171

Query: 194 LMELAILNGTY---RDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPT 250
           L EL+ LNG+    R   I+   +   +A TA +  R   G  P  PP      TP G T
Sbjct: 172 LRELSYLNGSEDSGRGRGIRGRGI--RIAPTAPSRGR--GGAIPPPPPPGRGVLTPRGST 227

Query: 251 IMPLIRQIQTAVMPNGTPHPTAAIVP-------PGPEAGLIYTPYEY 290
           +      +    +  G P P A   P       P P A   Y  Y Y
Sbjct: 228 VTR--GALPVPPVARGVPTPRARGAPTVPGYRAPPPPAHEAYEEYGY 272


>gi|5730073 KH domain containing, RNA binding, signal transduction
           associated 3 [Homo sapiens]
          Length = 346

 Score =  137 bits (346), Expect = 1e-32
 Identities = 101/286 (35%), Positives = 149/286 (52%), Gaps = 31/286 (10%)

Query: 17  YLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAV 76
           YL +LM +K  +         F H  RL+++EI + +K        G  E++  ++   +
Sbjct: 5   YLPELMAEKDSLDPS------FTHALRLVNQEIEKFQKG------EGKDEEKYIDV--VI 50

Query: 77  GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
              ++L +K+ +PVK++P FNFVG++LGPRG + K+L+ ET  K+ + GKGSMRDK KEE
Sbjct: 51  NKNMKLGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEE 110

Query: 137 QNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQL 194
           + R  G+  + HLN+DLHVLI V      A  ++  A+EE+KK L+P  +  D +++ QL
Sbjct: 111 ELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQL 168

Query: 195 MELAILNGTYRDANIKSPALAFSLAATAQAAPRIITG-------PAPVLPPAALRTPTPA 247
            EL  LNG   +A++       +L      AP I  G       P  V+ P    TPTP 
Sbjct: 169 QELTYLNGGSENADVPVVRGKPTLRTRGVPAPAITRGRGGVTARPVGVVVPRG--TPTPR 226

Query: 248 G--PTIMPLIR-QIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEY 290
           G   T  P+ R +        G P PT    PP P     Y  Y+Y
Sbjct: 227 GVLSTRGPVSRGRGLLTPRARGVP-PTGYRPPPPPPTQETYGEYDY 271


>gi|5730027 KH domain containing, RNA binding, signal transduction
           associated 1 [Homo sapiens]
          Length = 443

 Score =  134 bits (336), Expect = 1e-31
 Identities = 107/299 (35%), Positives = 143/299 (47%), Gaps = 31/299 (10%)

Query: 10  KPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRS 69
           K +P   YL +LM +K  +         F H  +LL  EI +++K        G ++K  
Sbjct: 96  KMEPENKYLPELMAEKDSLDPS------FTHAMQLLTAEIEKIQK--------GDSKKDD 141

Query: 70  AE--LPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127
            E  L       ++L+E++ +PVK+YP FNFVG+ILGP+G T K+L+ ETG KI V GKG
Sbjct: 142 EENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201

Query: 128 SMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG 185
           SMRDK KEE+ R  G P + HLN DLHV I V      A   +  A+EEVKK LVP  + 
Sbjct: 202 SMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DM 259

Query: 186 EDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPT 245
            D + + Q +EL+ LNG    +  +   +       A   P +  G     P  AL   T
Sbjct: 260 MDDICQEQFLELSYLNGVPEPS--RGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGT 317

Query: 246 PAGPTI---MPLIRQIQTAVMPNGTPHPTA------AIVPPGPEAGLIYTPYEYPYTLA 295
           P    I     + R +       G P P A       I  P P A   Y  Y Y  T A
Sbjct: 318 PVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYA 376


>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
          Length = 548

 Score =  100 bits (248), Expect = 2e-21
 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 15/178 (8%)

Query: 37  IFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELP-----DAVGPIVQLQEKLYVPVK 91
           I+N   + L+    R RK +  +  N  TE  +         D   P  ++ +K+ +P  
Sbjct: 86  IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 145

Query: 92  EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDL 151
           EYP+ NFVG ++GPRG T K +E E   KIM+RGKGS+++ K   ++      E  +E L
Sbjct: 146 EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGE--DEPL 203

Query: 152 HVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD 206
           H L+T    +N     +K+AVE+++ +L   +   E ++ L+KMQL ELA LNGT R+
Sbjct: 204 HALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLRE 256


>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
          Length = 638

 Score =  100 bits (248), Expect = 2e-21
 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 15/178 (8%)

Query: 37  IFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELP-----DAVGPIVQLQEKLYVPVK 91
           I+N   + L+    R RK +  +  N  TE  +         D   P  ++ +K+ +P  
Sbjct: 86  IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 145

Query: 92  EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDL 151
           EYP+ NFVG ++GPRG T K +E E   KIM+RGKGS+++ K   ++      E  +E L
Sbjct: 146 EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGE--DEPL 203

Query: 152 HVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD 206
           H L+T    +N     +K+AVE+++ +L   +   E ++ L+KMQL ELA LNGT R+
Sbjct: 204 HALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLRE 256


>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
          Length = 639

 Score =  100 bits (248), Expect = 2e-21
 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 15/178 (8%)

Query: 37  IFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELP-----DAVGPIVQLQEKLYVPVK 91
           I+N   + L+    R RK +  +  N  TE  +         D   P  ++ +K+ +P  
Sbjct: 86  IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 145

Query: 92  EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDL 151
           EYP+ NFVG ++GPRG T K +E E   KIM+RGKGS+++ K   ++      E  +E L
Sbjct: 146 EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGE--DEPL 203

Query: 152 HVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD 206
           H L+T    +N     +K+AVE+++ +L   +   E ++ L+KMQL ELA LNGT R+
Sbjct: 204 HALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLRE 256


>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
          Length = 614

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 67/301 (22%), Positives = 121/301 (40%), Gaps = 55/301 (18%)

Query: 5   METKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYND----- 59
           M T+EK K  P                P +  +      L+D  ++R+++ + N      
Sbjct: 144 MTTEEKAKVGP-------------GDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAA 190

Query: 60  -----TLNGST------EKRSAELPDAVG--PIVQ-----LQEKLYVPVKE-YPDFNFVG 100
                T NG+T          A+L  AV   P  Q     +Q+KL+V ++   P FN   
Sbjct: 191 TGTSPTFNGATVTVYHQPAPIAQLSPAVSQKPPFQSGMHYVQDKLFVGLEHAVPTFNVKE 250

Query: 101 RILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDA 160
           ++ GP     + ++ ETG K+ +RGKGS   +    +   +P        +++ I+    
Sbjct: 251 KVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREAFEP--------MYIYISHPKP 302

Query: 161 QNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKS--PALAFSL 218
           +  A      A +++ + L+     E S    Q+     L G  + + I S  P   +  
Sbjct: 303 EGLA------AAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYP 356

Query: 219 AATAQAAPRIITGP-APVLPPAALRTPTPAGPTIMP-LIRQIQTAVMPNGTPHPTAAIVP 276
           +   Q+   ++  P  PV PP  + +  P   ++ P ++  + T V P  T +P   + P
Sbjct: 357 SNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQP 416

Query: 277 P 277
           P
Sbjct: 417 P 417


>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 16/106 (15%)

Query: 224 AAPRIITGPAPVLPPAALRTPT-----PAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPG 278
           AAP + + PAP   P    TP      P GP   P   Q Q+A   +G P P  A  PPG
Sbjct: 579 AAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG-PVPQPACPPPG 637

Query: 279 P------EAGLIYTPYEYPYTLAPATSIL--EYPIEPSGVLGMAFP 316
           P        G I  P   P  +A +TS+L  +  + P G+ G + P
Sbjct: 638 PAPHPTGPPGPI--PVPAPPQIATSTSLLAAQSLVPPPGLPGSSTP 681


>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 16/106 (15%)

Query: 224 AAPRIITGPAPVLPPAALRTPT-----PAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPG 278
           AAP + + PAP   P    TP      P GP   P   Q Q+A   +G P P  A  PPG
Sbjct: 579 AAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG-PVPQPACPPPG 637

Query: 279 P------EAGLIYTPYEYPYTLAPATSIL--EYPIEPSGVLGMAFP 316
           P        G I  P   P  +A +TS+L  +  + P G+ G + P
Sbjct: 638 PAPHPTGPPGPI--PVPAPPQIATSTSLLAAQSLVPPPGLPGSSTP 681


>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 16/106 (15%)

Query: 224 AAPRIITGPAPVLPPAALRTPT-----PAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPG 278
           AAP + + PAP   P    TP      P GP   P   Q Q+A   +G P P  A  PPG
Sbjct: 579 AAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG-PVPQPACPPPG 637

Query: 279 P------EAGLIYTPYEYPYTLAPATSIL--EYPIEPSGVLGMAFP 316
           P        G I  P   P  +A +TS+L  +  + P G+ G + P
Sbjct: 638 PAPHPTGPPGPI--PVPAPPQIATSTSLLAAQSLVPPPGLPGSSTP 681


>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
           sapiens]
          Length = 677

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 16/106 (15%)

Query: 224 AAPRIITGPAPVLPPAALRTPT-----PAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPG 278
           AAP + + PAP   P    TP      P GP   P   Q Q+A   +G P P  A  PPG
Sbjct: 440 AAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG-PVPQPACPPPG 498

Query: 279 P------EAGLIYTPYEYPYTLAPATSIL--EYPIEPSGVLGMAFP 316
           P        G I  P   P  +A +TS+L  +  + P G+ G + P
Sbjct: 499 PAPHPTGPPGPI--PVPAPPQIATSTSLLAAQSLVPPPGLPGSSTP 542


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 12/73 (16%)

Query: 219 AATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVP-- 276
           AAT +AAP +   PAP  PP A+ TP P G      ++Q Q A  P   P P AA  P  
Sbjct: 610 AATGEAAPVLTVQPAPQAPP-AVSTPLPLG------LQQPQ-AQQPPQAPTPQAAAPPQA 661

Query: 277 --PGPEAGLIYTP 287
             P P  GL  +P
Sbjct: 662 TTPQPSPGLASSP 674



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 228 IITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP 287
           +I     V PPA+   PT  GP   PL  Q Q    P   P P A  +PP   +  + + 
Sbjct: 836 VIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQ----PPEGPLPPAPHLPPSSTSSAVASS 891

Query: 288 YEYPYTL-APATSILEYPIEPS 308
            E    L AP  S  +    PS
Sbjct: 892 SETSSRLPAPTPSDFQLQFPPS 913



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 15/44 (34%), Positives = 20/44 (45%)

Query: 238  PAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEA 281
            PAA +T T  GP   P    + +   P+GTP   +    P P A
Sbjct: 980  PAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPMA 1023


>gi|93004092 nuclear factor I/B [Homo sapiens]
          Length = 420

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 16/106 (15%)

Query: 205 RDANIKSPALA-------FSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQ 257
           RD ++ SP          FS A+   ++PR+ T P         +   P  P +   +  
Sbjct: 306 RDQDMSSPTTMKKPEKPLFSSASPQDSSPRLSTFP---------QHHHPGIPGVAHSVIS 356

Query: 258 IQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSILEY 303
            +T   P+  P PT AI+PP P +   +    YP  L P  ++  Y
Sbjct: 357 TRTPPPPSPLPFPTQAILPPAPSSYFSHPTIRYPPHLNPQDTLKNY 402


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 22/59 (37%), Positives = 24/59 (40%)

Query: 221 TAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGP 279
           T+ A P    GP P  PPA    P  A P   P      T     G P P AA+  PGP
Sbjct: 138 TSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGP 196


>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
           sapiens]
          Length = 1077

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 207 ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPA---GPTIMPLIRQIQTAVM 263
           A +++ A+  S   T+  AP + T  +   P +   T T A     T+     Q QT   
Sbjct: 249 AQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSS 308

Query: 264 PNGTPHPTAAIVPPGPEAGLIYT-PYEYPYTLAPA 297
                 PT ++  P P A  + T P  +P TL PA
Sbjct: 309 AVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPA 343


>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
           sapiens]
          Length = 1098

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 207 ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPA---GPTIMPLIRQIQTAVM 263
           A +++ A+  S   T+  AP + T  +   P +   T T A     T+     Q QT   
Sbjct: 249 AQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSS 308

Query: 264 PNGTPHPTAAIVPPGPEAGLIYT-PYEYPYTLAPA 297
                 PT ++  P P A  + T P  +P TL PA
Sbjct: 309 AVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPA 343


>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
          Length = 985

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%)

Query: 212 PALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPT 271
           P  + + + T++ APR    P PVLP   L+  +PA P ++P +       +P   P P 
Sbjct: 263 PPTSDATSPTSRWAPRRPPPPPPVLP---LQPCSPAQPPVLPALAPAPACPLPTSPPVPA 319

Query: 272 AAIVP--PGP 279
             + P  PGP
Sbjct: 320 PHVTPHAPGP 329


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
            [Homo sapiens]
          Length = 2903

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 48/149 (32%), Positives = 63/149 (42%), Gaps = 28/149 (18%)

Query: 120  KIMVRGKGSMRDKKKEE---QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVK 176
            KI    K + + +K+EE   Q R K N   L+     L+     Q RAEI  KRA+ + K
Sbjct: 2564 KIDKEEKQAAKKRKREESVEQKRSKQNATKLS----ALLFKHKEQLRAEILKKRALLD-K 2618

Query: 177  KLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLA-ATAQAAPRIITGPAPV 235
             L +   E ++ LK              RD  IK       LA ATA AAP     PAP 
Sbjct: 2619 DLQI---EVQEELK--------------RDLKIKKEKDLMQLAQATAVAAPCPPVTPAPP 2661

Query: 236  LPPAALRTPTPAGPTIMPLIRQIQTAVMP 264
             PPA    P+P  P  +     + T  +P
Sbjct: 2662 APPAP--PPSPPPPPAVQHTGLLSTPTLP 2688


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
            [Homo sapiens]
          Length = 2920

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 48/149 (32%), Positives = 63/149 (42%), Gaps = 28/149 (18%)

Query: 120  KIMVRGKGSMRDKKKEE---QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVK 176
            KI    K + + +K+EE   Q R K N   L+     L+     Q RAEI  KRA+ + K
Sbjct: 2581 KIDKEEKQAAKKRKREESVEQKRSKQNATKLS----ALLFKHKEQLRAEILKKRALLD-K 2635

Query: 177  KLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLA-ATAQAAPRIITGPAPV 235
             L +   E ++ LK              RD  IK       LA ATA AAP     PAP 
Sbjct: 2636 DLQI---EVQEELK--------------RDLKIKKEKDLMQLAQATAVAAPCPPVTPAPP 2678

Query: 236  LPPAALRTPTPAGPTIMPLIRQIQTAVMP 264
             PPA    P+P  P  +     + T  +P
Sbjct: 2679 APPAP--PPSPPPPPAVQHTGLLSTPTLP 2705


>gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]
          Length = 609

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 16/104 (15%)

Query: 213 ALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTA 272
           A AF  AA  Q  P  + G A   PP A+  P+  G    P          PNG P P  
Sbjct: 517 ANAFCSAAQLQPQPATLLGKAGAFPPPAI--PSAPGSQARP---------RPNGAPWPPE 565

Query: 273 AIVPPGPEAGLIYTPYEYPYTLAPATSILEYPIEP-SGVLGMAF 315
               P PE      P+E  +      + +E P  P SG L   F
Sbjct: 566 PAPAPAPE----LDPFEAQWAALEGKATVEKPSNPFSGDLQKTF 605


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 13/101 (12%)

Query: 210  KSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPH 269
            K+PA+     A A  + +  + P  V P      P+P    I P +    T+  P   P 
Sbjct: 1560 KTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAV----TSPSPKEAPT 1615

Query: 270  PTAAIVPPGPEAGLIYTPYEYPYTLAPATSILEYPIEPSGV 310
            P  A+ PP PE G        P T AP  +    P+ PS +
Sbjct: 1616 P-PAVTPPSPEKG--------PATPAPKGTPTSPPVTPSSL 1647



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 8/80 (10%)

Query: 226  PRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTA-----AIVPPGPE 280
            P   T P+P   PA   TP+P G    P +        P  TP P       A  PP P+
Sbjct: 988  PPAATPPSPKGGPA---TPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK 1044

Query: 281  AGLIYTPYEYPYTLAPATSI 300
                 TP        PA ++
Sbjct: 1045 GSPAATPLPKGAPTTPAATL 1064



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 232 PAPVLPPA-ALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
           PAP   PA ++ + +P      P  + I  +  P G P P AA  PP P+ G
Sbjct: 903 PAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAA-TPPSPKGG 953


>gi|19111150 angiomotin isoform 2 [Homo sapiens]
          Length = 675

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 207 ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTP-AGPTIMPLIRQIQT---AV 262
           A++ S A     AA A A       PAPV  PA +  P P A     P   Q  T   AV
Sbjct: 542 ASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAV 601

Query: 263 MPNGTPHPTAAI----VPPGPEAG 282
            P   P PT A+    VP  P  G
Sbjct: 602 APTPAPTPTPAVAQAEVPASPATG 625



 Score = 28.5 bits (62), Expect = 8.3
 Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 215 AFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQT--AVMPNG------ 266
           A  +A  A AAP     P+P    A     +PA    +P    + +  AV P+       
Sbjct: 501 AAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAV 560

Query: 267 -------TPHPTAAIVP-PGPEAGLIYTPYE-YPYTLAPATSILEYPIEPSGVLGMAFP 316
                   P P  A+VP P P A     P +    T APA +    P     V     P
Sbjct: 561 QVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVP 619


>gi|166064029 angiomotin isoform 1 [Homo sapiens]
          Length = 1084

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 207  ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTP-AGPTIMPLIRQIQT---AV 262
            A++ S A     AA A A       PAPV  PA +  P P A     P   Q  T   AV
Sbjct: 951  ASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAV 1010

Query: 263  MPNGTPHPTAAI----VPPGPEAG 282
             P   P PT A+    VP  P  G
Sbjct: 1011 APTPAPTPTPAVAQAEVPASPATG 1034



 Score = 28.5 bits (62), Expect = 8.3
 Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 215  AFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQT--AVMPNG------ 266
            A  +A  A AAP     P+P    A     +PA    +P    + +  AV P+       
Sbjct: 910  AAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAV 969

Query: 267  -------TPHPTAAIVP-PGPEAGLIYTPYE-YPYTLAPATSILEYPIEPSGVLGMAFP 316
                    P P  A+VP P P A     P +    T APA +    P     V     P
Sbjct: 970  QVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVP 1028


>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
          Length = 1711

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 39/124 (31%), Positives = 51/124 (41%), Gaps = 20/124 (16%)

Query: 207 ANIKSPALAFSLAATAQAAPRIITGP------------APVLPPAALRTPTPAGPTIMPL 254
           A + +P LA   A+T  AAP   + P             P L PA   TP PA PT  P+
Sbjct: 331 APVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPA-PTPAPI 389

Query: 255 IRQIQTAVMPNGTPH--PTAAIVPPGPEAGLIYTPYEYPYTLAPATSILEYPIEPSGVLG 312
                T  MP  TP   PT+A +P    A    +   +P   APA   +    +P  VL 
Sbjct: 390 FTPAPTP-MPAATPAAIPTSAPIP----ASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLT 444

Query: 313 MAFP 316
            + P
Sbjct: 445 PSQP 448



 Score = 34.3 bits (77), Expect = 0.15
 Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 30/110 (27%)

Query: 209 IKSPALAFSLAATAQAAPRIITGPAPV---------LPPAA-------LRTPTPAG---- 248
           + +P LA   A    +AP ++  P P           PPAA       + TPTP+     
Sbjct: 309 VSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPS 368

Query: 249 -PTIMPLIRQIQTAVMPNGTPHPT-AAIVPPGPEAGLIYTPYEYPYTLAP 296
            PT++P       A  P   P PT A I  P P      TP   P T AP
Sbjct: 369 TPTLIP-------AFAPTPVPAPTPAPIFTPAPTPMPAATPAAIP-TSAP 410



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 4/80 (5%)

Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPG---PEAGLIYTPY 288
           PAP  P A +    PA P++  LI       +      P  A  PP    P +     P 
Sbjct: 246 PAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPL 305

Query: 289 EYPYTLAPATSILEYPIEPS 308
             P + AP  ++++ P+ PS
Sbjct: 306 SVPVS-APPLALIQAPVPPS 324


>gi|160707881 formin 2 [Homo sapiens]
          Length = 1722

 Score = 35.4 bits (80), Expect = 0.068
 Identities = 24/76 (31%), Positives = 30/76 (39%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYP 291
            P P LP A +  P P     +P    +    +P   P P A I PP P  G+   P   P
Sbjct: 1164 PPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAP 1223

Query: 292  YTLAPATSILEYPIEP 307
                P T I   P+ P
Sbjct: 1224 PLPPPGTGIPPPPLLP 1239



 Score = 33.9 bits (76), Expect = 0.20
 Identities = 20/51 (39%), Positives = 24/51 (47%)

Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
           P P LP AA+  P P     +PL   +  A +P   P P A I PP P  G
Sbjct: 944 PPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPG 994



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
           P P LP A +  P P     +P    +  A +P   P P A I PP P  G
Sbjct: 933 PLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPG 983



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/56 (33%), Positives = 24/56 (42%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP 287
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G+   P
Sbjct: 1054 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP 1109



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/56 (33%), Positives = 24/56 (42%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP 287
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G+   P
Sbjct: 1131 PPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP 1186



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G
Sbjct: 955  PPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1005



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G
Sbjct: 977  PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1027



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G
Sbjct: 988  PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1038



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G
Sbjct: 999  PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1049



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G
Sbjct: 1010 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1060



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G
Sbjct: 1021 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1071



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G
Sbjct: 1032 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1082



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G
Sbjct: 1043 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1093



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P P LP A +  P P     +P    +  A +P   P P A I PP P  G
Sbjct: 1087 PPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1137



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 18/57 (31%), Positives = 23/57 (40%)

Query: 226  PRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P +   P P LP A +  P P     +P    +  A +P   P P   I PP P  G
Sbjct: 1103 PGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPG 1159



 Score = 28.5 bits (62), Expect = 8.3
 Identities = 17/51 (33%), Positives = 21/51 (41%)

Query: 232  PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282
            P P LP A +  P P     +P    +    +P   P P A I PP P  G
Sbjct: 1120 PPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPG 1170


>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
          Length = 483

 Score = 35.4 bits (80), Expect = 0.068
 Identities = 45/152 (29%), Positives = 57/152 (37%), Gaps = 14/152 (9%)

Query: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
           +NR +   E  N DL      ED   + E K      E       AA G + L+      
Sbjct: 182 RNRSEDEEEEENIDLEK--NDEDEPQKPEDKGDPEGPEAGGAEQKAASGCERLQGPPTPA 239

Query: 197 LAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIR 256
                G+  D++ K P     L A  Q  PR   GP+P  P AA     PA         
Sbjct: 240 GKETEGSLSDSDFKEPPSEGRLDAL-QGPPRT-GGPSPAGPAAARLAEDPAPH------- 290

Query: 257 QIQTAVMPNGTPHPTAAIVPPGPEA-GLIYTP 287
               A  P   PHP A  VPPGP    +I++P
Sbjct: 291 --YPAGAPAPGPHPAAGEVPPGPGGPSVIHSP 320


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.134    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,104,235
Number of Sequences: 37866
Number of extensions: 771649
Number of successful extensions: 3613
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 211
Number of HSP's that attempted gapping in prelim test: 3108
Number of HSP's gapped (non-prelim): 656
length of query: 319
length of database: 18,247,518
effective HSP length: 102
effective length of query: 217
effective length of database: 14,385,186
effective search space: 3121585362
effective search space used: 3121585362
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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