BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6 [Homo sapiens] (319 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6... 640 0.0 gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7... 627 e-180 gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5... 625 e-179 gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7... 623 e-179 gi|189217895 KH domain-containing, RNA-binding, signal transduct... 141 9e-34 gi|5730073 KH domain containing, RNA binding, signal transductio... 137 1e-32 gi|5730027 KH domain containing, RNA binding, signal transductio... 134 1e-31 gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 100 2e-21 gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 100 2e-21 gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 100 2e-21 gi|55741675 hypothetical protein LOC22889 [Homo sapiens] 44 1e-04 gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 40 0.003 gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 40 0.003 gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 40 0.003 gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 40 0.003 gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 39 0.005 gi|93004092 nuclear factor I/B [Homo sapiens] 39 0.006 gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 38 0.014 gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 38 0.014 gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 38 0.014 gi|40353729 Ras and Rab interactor 3 [Homo sapiens] 37 0.018 gi|38788260 bromodomain PHD finger transcription factor isoform ... 37 0.023 gi|38788274 bromodomain PHD finger transcription factor isoform ... 37 0.023 gi|10863899 numb homolog (Drosophila)-like [Homo sapiens] 37 0.023 gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.023 gi|19111150 angiomotin isoform 2 [Homo sapiens] 36 0.040 gi|166064029 angiomotin isoform 1 [Homo sapiens] 36 0.040 gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 36 0.040 gi|160707881 formin 2 [Homo sapiens] 35 0.068 gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 35 0.068 >gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6 [Homo sapiens] Length = 319 Score = 640 bits (1651), Expect = 0.0 Identities = 319/319 (100%), Positives = 319/319 (100%) Query: 1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT Sbjct: 1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60 Query: 61 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK Sbjct: 61 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120 Query: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV Sbjct: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180 Query: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA Sbjct: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240 Query: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI Sbjct: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300 Query: 301 LEYPIEPSGVLGMAFPTKG 319 LEYPIEPSGVLGMAFPTKG Sbjct: 301 LEYPIEPSGVLGMAFPTKG 319 >gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7B [Homo sapiens] Length = 319 Score = 627 bits (1617), Expect = e-180 Identities = 314/319 (98%), Positives = 314/319 (98%) Query: 1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT Sbjct: 1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60 Query: 61 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK Sbjct: 61 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120 Query: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV Sbjct: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180 Query: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA Sbjct: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240 Query: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI Sbjct: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300 Query: 301 LEYPIEPSGVLGMAFPTKG 319 LEYPIEPSGVLG F G Sbjct: 301 LEYPIEPSGVLGKFFSPWG 319 >gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5 [Homo sapiens] Length = 341 Score = 625 bits (1613), Expect = e-179 Identities = 312/312 (100%), Positives = 312/312 (100%) Query: 1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT Sbjct: 1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60 Query: 61 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK Sbjct: 61 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120 Query: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV Sbjct: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180 Query: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA Sbjct: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240 Query: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI Sbjct: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300 Query: 301 LEYPIEPSGVLG 312 LEYPIEPSGVLG Sbjct: 301 LEYPIEPSGVLG 312 >gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7 [Homo sapiens] Length = 325 Score = 623 bits (1607), Expect = e-179 Identities = 311/311 (100%), Positives = 311/311 (100%) Query: 1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT Sbjct: 1 MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT 60 Query: 61 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK Sbjct: 61 LNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK 120 Query: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV Sbjct: 121 IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLV 180 Query: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA Sbjct: 181 PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAA 240 Query: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI Sbjct: 241 LRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSI 300 Query: 301 LEYPIEPSGVL 311 LEYPIEPSGVL Sbjct: 301 LEYPIEPSGVL 311 >gi|189217895 KH domain-containing, RNA-binding, signal transduction-associated protein 2 [Homo sapiens] Length = 349 Score = 141 bits (355), Expect = 9e-34 Identities = 103/287 (35%), Positives = 148/287 (51%), Gaps = 33/287 (11%) Query: 17 YLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAV 76 YL +LM +K + P+F H RLL EEI + + +G E + D + Sbjct: 6 YLPELMAEKDSLD--PSFV----HASRLLAEEIEKFQGS------DGKKEDEEKKYLDVI 53 Query: 77 G-PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135 ++L E++ +PVK+YP FNFVG++LGPRG + K+L+ ETG K+ + GKGSMRDK KE Sbjct: 54 SNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKE 113 Query: 136 EQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQ 193 E+ R G+ + HL+++LHVLI V A ++ A+EE+KK LVP + D +++ Q Sbjct: 114 EELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQ 171 Query: 194 LMELAILNGTY---RDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPT 250 L EL+ LNG+ R I+ + +A TA + R G P PP TP G T Sbjct: 172 LRELSYLNGSEDSGRGRGIRGRGI--RIAPTAPSRGR--GGAIPPPPPPGRGVLTPRGST 227 Query: 251 IMPLIRQIQTAVMPNGTPHPTAAIVP-------PGPEAGLIYTPYEY 290 + + + G P P A P P P A Y Y Y Sbjct: 228 VTR--GALPVPPVARGVPTPRARGAPTVPGYRAPPPPAHEAYEEYGY 272 >gi|5730073 KH domain containing, RNA binding, signal transduction associated 3 [Homo sapiens] Length = 346 Score = 137 bits (346), Expect = 1e-32 Identities = 101/286 (35%), Positives = 149/286 (52%), Gaps = 31/286 (10%) Query: 17 YLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAV 76 YL +LM +K + F H RL+++EI + +K G E++ ++ + Sbjct: 5 YLPELMAEKDSLDPS------FTHALRLVNQEIEKFQKG------EGKDEEKYIDV--VI 50 Query: 77 GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136 ++L +K+ +PVK++P FNFVG++LGPRG + K+L+ ET K+ + GKGSMRDK KEE Sbjct: 51 NKNMKLGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEE 110 Query: 137 QNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQL 194 + R G+ + HLN+DLHVLI V A ++ A+EE+KK L+P + D +++ QL Sbjct: 111 ELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQL 168 Query: 195 MELAILNGTYRDANIKSPALAFSLAATAQAAPRIITG-------PAPVLPPAALRTPTPA 247 EL LNG +A++ +L AP I G P V+ P TPTP Sbjct: 169 QELTYLNGGSENADVPVVRGKPTLRTRGVPAPAITRGRGGVTARPVGVVVPRG--TPTPR 226 Query: 248 G--PTIMPLIR-QIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEY 290 G T P+ R + G P PT PP P Y Y+Y Sbjct: 227 GVLSTRGPVSRGRGLLTPRARGVP-PTGYRPPPPPPTQETYGEYDY 271 >gi|5730027 KH domain containing, RNA binding, signal transduction associated 1 [Homo sapiens] Length = 443 Score = 134 bits (336), Expect = 1e-31 Identities = 107/299 (35%), Positives = 143/299 (47%), Gaps = 31/299 (10%) Query: 10 KPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRS 69 K +P YL +LM +K + F H +LL EI +++K G ++K Sbjct: 96 KMEPENKYLPELMAEKDSLDPS------FTHAMQLLTAEIEKIQK--------GDSKKDD 141 Query: 70 AE--LPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKG 127 E L ++L+E++ +PVK+YP FNFVG+ILGP+G T K+L+ ETG KI V GKG Sbjct: 142 EENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKG 201 Query: 128 SMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEG 185 SMRDK KEE+ R G P + HLN DLHV I V A + A+EEVKK LVP + Sbjct: 202 SMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DM 259 Query: 186 EDSLKKMQLMELAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPT 245 D + + Q +EL+ LNG + + + A P + G P AL T Sbjct: 260 MDDICQEQFLELSYLNGVPEPS--RGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGT 317 Query: 246 PAGPTI---MPLIRQIQTAVMPNGTPHPTA------AIVPPGPEAGLIYTPYEYPYTLA 295 P I + R + G P P A I P P A Y Y Y T A Sbjct: 318 PVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYA 376 >gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] Length = 548 Score = 100 bits (248), Expect = 2e-21 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 15/178 (8%) Query: 37 IFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELP-----DAVGPIVQLQEKLYVPVK 91 I+N + L+ R RK + + N TE + D P ++ +K+ +P Sbjct: 86 IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 145 Query: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDL 151 EYP+ NFVG ++GPRG T K +E E KIM+RGKGS+++ K ++ E +E L Sbjct: 146 EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGE--DEPL 203 Query: 152 HVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD 206 H L+T +N +K+AVE+++ +L + E ++ L+KMQL ELA LNGT R+ Sbjct: 204 HALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLRE 256 >gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] Length = 638 Score = 100 bits (248), Expect = 2e-21 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 15/178 (8%) Query: 37 IFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELP-----DAVGPIVQLQEKLYVPVK 91 I+N + L+ R RK + + N TE + D P ++ +K+ +P Sbjct: 86 IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 145 Query: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDL 151 EYP+ NFVG ++GPRG T K +E E KIM+RGKGS+++ K ++ E +E L Sbjct: 146 EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGE--DEPL 203 Query: 152 HVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD 206 H L+T +N +K+AVE+++ +L + E ++ L+KMQL ELA LNGT R+ Sbjct: 204 HALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLRE 256 >gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] Length = 639 Score = 100 bits (248), Expect = 2e-21 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 15/178 (8%) Query: 37 IFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELP-----DAVGPIVQLQEKLYVPVK 91 I+N + L+ R RK + + N TE + D P ++ +K+ +P Sbjct: 86 IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 145 Query: 92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDL 151 EYP+ NFVG ++GPRG T K +E E KIM+RGKGS+++ K ++ E +E L Sbjct: 146 EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGE--DEPL 203 Query: 152 HVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD 206 H L+T +N +K+AVE+++ +L + E ++ L+KMQL ELA LNGT R+ Sbjct: 204 HALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLRE 256 >gi|55741675 hypothetical protein LOC22889 [Homo sapiens] Length = 614 Score = 44.3 bits (103), Expect = 1e-04 Identities = 67/301 (22%), Positives = 121/301 (40%), Gaps = 55/301 (18%) Query: 5 METKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYND----- 59 M T+EK K P P + + L+D ++R+++ + N Sbjct: 144 MTTEEKAKVGP-------------GDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAA 190 Query: 60 -----TLNGST------EKRSAELPDAVG--PIVQ-----LQEKLYVPVKE-YPDFNFVG 100 T NG+T A+L AV P Q +Q+KL+V ++ P FN Sbjct: 191 TGTSPTFNGATVTVYHQPAPIAQLSPAVSQKPPFQSGMHYVQDKLFVGLEHAVPTFNVKE 250 Query: 101 RILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDA 160 ++ GP + ++ ETG K+ +RGKGS + + +P +++ I+ Sbjct: 251 KVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREAFEP--------MYIYISHPKP 302 Query: 161 QNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKS--PALAFSL 218 + A A +++ + L+ E S Q+ L G + + I S P + Sbjct: 303 EGLA------AAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYP 356 Query: 219 AATAQAAPRIITGP-APVLPPAALRTPTPAGPTIMP-LIRQIQTAVMPNGTPHPTAAIVP 276 + Q+ ++ P PV PP + + P ++ P ++ + T V P T +P + P Sbjct: 357 SNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQP 416 Query: 277 P 277 P Sbjct: 417 P 417 >gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo sapiens] Length = 816 Score = 40.0 bits (92), Expect = 0.003 Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 16/106 (15%) Query: 224 AAPRIITGPAPVLPPAALRTPT-----PAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPG 278 AAP + + PAP P TP P GP P Q Q+A +G P P A PPG Sbjct: 579 AAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG-PVPQPACPPPG 637 Query: 279 P------EAGLIYTPYEYPYTLAPATSIL--EYPIEPSGVLGMAFP 316 P G I P P +A +TS+L + + P G+ G + P Sbjct: 638 PAPHPTGPPGPI--PVPAPPQIATSTSLLAAQSLVPPPGLPGSSTP 681 >gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo sapiens] Length = 816 Score = 40.0 bits (92), Expect = 0.003 Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 16/106 (15%) Query: 224 AAPRIITGPAPVLPPAALRTPT-----PAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPG 278 AAP + + PAP P TP P GP P Q Q+A +G P P A PPG Sbjct: 579 AAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG-PVPQPACPPPG 637 Query: 279 P------EAGLIYTPYEYPYTLAPATSIL--EYPIEPSGVLGMAFP 316 P G I P P +A +TS+L + + P G+ G + P Sbjct: 638 PAPHPTGPPGPI--PVPAPPQIATSTSLLAAQSLVPPPGLPGSSTP 681 >gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo sapiens] Length = 816 Score = 40.0 bits (92), Expect = 0.003 Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 16/106 (15%) Query: 224 AAPRIITGPAPVLPPAALRTPT-----PAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPG 278 AAP + + PAP P TP P GP P Q Q+A +G P P A PPG Sbjct: 579 AAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG-PVPQPACPPPG 637 Query: 279 P------EAGLIYTPYEYPYTLAPATSIL--EYPIEPSGVLGMAFP 316 P G I P P +A +TS+L + + P G+ G + P Sbjct: 638 PAPHPTGPPGPI--PVPAPPQIATSTSLLAAQSLVPPPGLPGSSTP 681 >gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo sapiens] Length = 677 Score = 40.0 bits (92), Expect = 0.003 Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 16/106 (15%) Query: 224 AAPRIITGPAPVLPPAALRTPT-----PAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPG 278 AAP + + PAP P TP P GP P Q Q+A +G P P A PPG Sbjct: 440 AAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG-PVPQPACPPPG 498 Query: 279 P------EAGLIYTPYEYPYTLAPATSIL--EYPIEPSGVLGMAFP 316 P G I P P +A +TS+L + + P G+ G + P Sbjct: 499 PAPHPTGPPGPI--PVPAPPQIATSTSLLAAQSLVPPPGLPGSSTP 542 >gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo sapiens] Length = 1560 Score = 39.3 bits (90), Expect = 0.005 Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 12/73 (16%) Query: 219 AATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVP-- 276 AAT +AAP + PAP PP A+ TP P G ++Q Q A P P P AA P Sbjct: 610 AATGEAAPVLTVQPAPQAPP-AVSTPLPLG------LQQPQ-AQQPPQAPTPQAAAPPQA 661 Query: 277 --PGPEAGLIYTP 287 P P GL +P Sbjct: 662 TTPQPSPGLASSP 674 Score = 30.8 bits (68), Expect = 1.7 Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 5/82 (6%) Query: 228 IITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP 287 +I V PPA+ PT GP PL Q Q P P P A +PP + + + Sbjct: 836 VIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQ----PPEGPLPPAPHLPPSSTSSAVASS 891 Query: 288 YEYPYTL-APATSILEYPIEPS 308 E L AP S + PS Sbjct: 892 SETSSRLPAPTPSDFQLQFPPS 913 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/44 (34%), Positives = 20/44 (45%) Query: 238 PAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEA 281 PAA +T T GP P + + P+GTP + P P A Sbjct: 980 PAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPMA 1023 >gi|93004092 nuclear factor I/B [Homo sapiens] Length = 420 Score = 38.9 bits (89), Expect = 0.006 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 16/106 (15%) Query: 205 RDANIKSPALA-------FSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQ 257 RD ++ SP FS A+ ++PR+ T P + P P + + Sbjct: 306 RDQDMSSPTTMKKPEKPLFSSASPQDSSPRLSTFP---------QHHHPGIPGVAHSVIS 356 Query: 258 IQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYPYTLAPATSILEY 303 +T P+ P PT AI+PP P + + YP L P ++ Y Sbjct: 357 TRTPPPPSPLPFPTQAILPPAPSSYFSHPTIRYPPHLNPQDTLKNY 402 >gi|4826998 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Homo sapiens] Length = 707 Score = 37.7 bits (86), Expect = 0.014 Identities = 22/59 (37%), Positives = 24/59 (40%) Query: 221 TAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGP 279 T+ A P GP P PPA P A P P T G P P AA+ PGP Sbjct: 138 TSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGP 196 >gi|91208418 transcription elongation regulator 1 isoform 2 [Homo sapiens] Length = 1077 Score = 37.7 bits (86), Expect = 0.014 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 4/95 (4%) Query: 207 ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPA---GPTIMPLIRQIQTAVM 263 A +++ A+ S T+ AP + T + P + T T A T+ Q QT Sbjct: 249 AQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSS 308 Query: 264 PNGTPHPTAAIVPPGPEAGLIYT-PYEYPYTLAPA 297 PT ++ P P A + T P +P TL PA Sbjct: 309 AVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPA 343 >gi|21327715 transcription elongation regulator 1 isoform 1 [Homo sapiens] Length = 1098 Score = 37.7 bits (86), Expect = 0.014 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 4/95 (4%) Query: 207 ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPA---GPTIMPLIRQIQTAVM 263 A +++ A+ S T+ AP + T + P + T T A T+ Q QT Sbjct: 249 AQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSS 308 Query: 264 PNGTPHPTAAIVPPGPEAGLIYT-PYEYPYTLAPA 297 PT ++ P P A + T P +P TL PA Sbjct: 309 AVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPA 343 >gi|40353729 Ras and Rab interactor 3 [Homo sapiens] Length = 985 Score = 37.4 bits (85), Expect = 0.018 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%) Query: 212 PALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPT 271 P + + + T++ APR P PVLP L+ +PA P ++P + +P P P Sbjct: 263 PPTSDATSPTSRWAPRRPPPPPPVLP---LQPCSPAQPPVLPALAPAPACPLPTSPPVPA 319 Query: 272 AAIVP--PGP 279 + P PGP Sbjct: 320 PHVTPHAPGP 329 >gi|38788260 bromodomain PHD finger transcription factor isoform 2 [Homo sapiens] Length = 2903 Score = 37.0 bits (84), Expect = 0.023 Identities = 48/149 (32%), Positives = 63/149 (42%), Gaps = 28/149 (18%) Query: 120 KIMVRGKGSMRDKKKEE---QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVK 176 KI K + + +K+EE Q R K N L+ L+ Q RAEI KRA+ + K Sbjct: 2564 KIDKEEKQAAKKRKREESVEQKRSKQNATKLS----ALLFKHKEQLRAEILKKRALLD-K 2618 Query: 177 KLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLA-ATAQAAPRIITGPAPV 235 L + E ++ LK RD IK LA ATA AAP PAP Sbjct: 2619 DLQI---EVQEELK--------------RDLKIKKEKDLMQLAQATAVAAPCPPVTPAPP 2661 Query: 236 LPPAALRTPTPAGPTIMPLIRQIQTAVMP 264 PPA P+P P + + T +P Sbjct: 2662 APPAP--PPSPPPPPAVQHTGLLSTPTLP 2688 >gi|38788274 bromodomain PHD finger transcription factor isoform 1 [Homo sapiens] Length = 2920 Score = 37.0 bits (84), Expect = 0.023 Identities = 48/149 (32%), Positives = 63/149 (42%), Gaps = 28/149 (18%) Query: 120 KIMVRGKGSMRDKKKEE---QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVK 176 KI K + + +K+EE Q R K N L+ L+ Q RAEI KRA+ + K Sbjct: 2581 KIDKEEKQAAKKRKREESVEQKRSKQNATKLS----ALLFKHKEQLRAEILKKRALLD-K 2635 Query: 177 KLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLA-ATAQAAPRIITGPAPV 235 L + E ++ LK RD IK LA ATA AAP PAP Sbjct: 2636 DLQI---EVQEELK--------------RDLKIKKEKDLMQLAQATAVAAPCPPVTPAPP 2678 Query: 236 LPPAALRTPTPAGPTIMPLIRQIQTAVMP 264 PPA P+P P + + T +P Sbjct: 2679 APPAP--PPSPPPPPAVQHTGLLSTPTLP 2705 >gi|10863899 numb homolog (Drosophila)-like [Homo sapiens] Length = 609 Score = 37.0 bits (84), Expect = 0.023 Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 16/104 (15%) Query: 213 ALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTA 272 A AF AA Q P + G A PP A+ P+ G P PNG P P Sbjct: 517 ANAFCSAAQLQPQPATLLGKAGAFPPPAI--PSAPGSQARP---------RPNGAPWPPE 565 Query: 273 AIVPPGPEAGLIYTPYEYPYTLAPATSILEYPIEP-SGVLGMAF 315 P PE P+E + + +E P P SG L F Sbjct: 566 PAPAPAPE----LDPFEAQWAALEGKATVEKPSNPFSGDLQKTF 605 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 37.0 bits (84), Expect = 0.023 Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 13/101 (12%) Query: 210 KSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPH 269 K+PA+ A A + + + P V P P+P I P + T+ P P Sbjct: 1560 KTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAV----TSPSPKEAPT 1615 Query: 270 PTAAIVPPGPEAGLIYTPYEYPYTLAPATSILEYPIEPSGV 310 P A+ PP PE G P T AP + P+ PS + Sbjct: 1616 P-PAVTPPSPEKG--------PATPAPKGTPTSPPVTPSSL 1647 Score = 31.2 bits (69), Expect = 1.3 Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 8/80 (10%) Query: 226 PRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTA-----AIVPPGPE 280 P T P+P PA TP+P G P + P TP P A PP P+ Sbjct: 988 PPAATPPSPKGGPA---TPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK 1044 Query: 281 AGLIYTPYEYPYTLAPATSI 300 TP PA ++ Sbjct: 1045 GSPAATPLPKGAPTTPAATL 1064 Score = 30.4 bits (67), Expect = 2.2 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 232 PAPVLPPA-ALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 PAP PA ++ + +P P + I + P G P P AA PP P+ G Sbjct: 903 PAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAA-TPPSPKGG 953 >gi|19111150 angiomotin isoform 2 [Homo sapiens] Length = 675 Score = 36.2 bits (82), Expect = 0.040 Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 8/84 (9%) Query: 207 ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTP-AGPTIMPLIRQIQT---AV 262 A++ S A AA A A PAPV PA + P P A P Q T AV Sbjct: 542 ASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAV 601 Query: 263 MPNGTPHPTAAI----VPPGPEAG 282 P P PT A+ VP P G Sbjct: 602 APTPAPTPTPAVAQAEVPASPATG 625 Score = 28.5 bits (62), Expect = 8.3 Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 17/119 (14%) Query: 215 AFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQT--AVMPNG------ 266 A +A A AAP P+P A +PA +P + + AV P+ Sbjct: 501 AAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAV 560 Query: 267 -------TPHPTAAIVP-PGPEAGLIYTPYE-YPYTLAPATSILEYPIEPSGVLGMAFP 316 P P A+VP P P A P + T APA + P V P Sbjct: 561 QVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVP 619 >gi|166064029 angiomotin isoform 1 [Homo sapiens] Length = 1084 Score = 36.2 bits (82), Expect = 0.040 Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 8/84 (9%) Query: 207 ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTP-AGPTIMPLIRQIQT---AV 262 A++ S A AA A A PAPV PA + P P A P Q T AV Sbjct: 951 ASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAV 1010 Query: 263 MPNGTPHPTAAI----VPPGPEAG 282 P P PT A+ VP P G Sbjct: 1011 APTPAPTPTPAVAQAEVPASPATG 1034 Score = 28.5 bits (62), Expect = 8.3 Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 17/119 (14%) Query: 215 AFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQT--AVMPNG------ 266 A +A A AAP P+P A +PA +P + + AV P+ Sbjct: 910 AAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAV 969 Query: 267 -------TPHPTAAIVP-PGPEAGLIYTPYE-YPYTLAPATSILEYPIEPSGVLGMAFP 316 P P A+VP P P A P + T APA + P V P Sbjct: 970 QVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVP 1028 >gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] Length = 1711 Score = 36.2 bits (82), Expect = 0.040 Identities = 39/124 (31%), Positives = 51/124 (41%), Gaps = 20/124 (16%) Query: 207 ANIKSPALAFSLAATAQAAPRIITGP------------APVLPPAALRTPTPAGPTIMPL 254 A + +P LA A+T AAP + P P L PA TP PA PT P+ Sbjct: 331 APVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPA-PTPAPI 389 Query: 255 IRQIQTAVMPNGTPH--PTAAIVPPGPEAGLIYTPYEYPYTLAPATSILEYPIEPSGVLG 312 T MP TP PT+A +P A + +P APA + +P VL Sbjct: 390 FTPAPTP-MPAATPAAIPTSAPIP----ASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLT 444 Query: 313 MAFP 316 + P Sbjct: 445 PSQP 448 Score = 34.3 bits (77), Expect = 0.15 Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 30/110 (27%) Query: 209 IKSPALAFSLAATAQAAPRIITGPAPV---------LPPAA-------LRTPTPAG---- 248 + +P LA A +AP ++ P P PPAA + TPTP+ Sbjct: 309 VSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPS 368 Query: 249 -PTIMPLIRQIQTAVMPNGTPHPT-AAIVPPGPEAGLIYTPYEYPYTLAP 296 PT++P A P P PT A I P P TP P T AP Sbjct: 369 TPTLIP-------AFAPTPVPAPTPAPIFTPAPTPMPAATPAAIP-TSAP 410 Score = 30.0 bits (66), Expect = 2.8 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 4/80 (5%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPG---PEAGLIYTPY 288 PAP P A + PA P++ LI + P A PP P + P Sbjct: 246 PAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPL 305 Query: 289 EYPYTLAPATSILEYPIEPS 308 P + AP ++++ P+ PS Sbjct: 306 SVPVS-APPLALIQAPVPPS 324 >gi|160707881 formin 2 [Homo sapiens] Length = 1722 Score = 35.4 bits (80), Expect = 0.068 Identities = 24/76 (31%), Positives = 30/76 (39%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEYP 291 P P LP A + P P +P + +P P P A I PP P G+ P P Sbjct: 1164 PPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAP 1223 Query: 292 YTLAPATSILEYPIEP 307 P T I P+ P Sbjct: 1224 PLPPPGTGIPPPPLLP 1239 Score = 33.9 bits (76), Expect = 0.20 Identities = 20/51 (39%), Positives = 24/51 (47%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP AA+ P P +PL + A +P P P A I PP P G Sbjct: 944 PPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPG 994 Score = 30.4 bits (67), Expect = 2.2 Identities = 18/51 (35%), Positives = 22/51 (43%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + A +P P P A I PP P G Sbjct: 933 PLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPG 983 Score = 30.4 bits (67), Expect = 2.2 Identities = 19/56 (33%), Positives = 24/56 (42%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP 287 P P LP A + P P +P + A +P P P A I PP P G+ P Sbjct: 1054 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP 1109 Score = 30.4 bits (67), Expect = 2.2 Identities = 19/56 (33%), Positives = 24/56 (42%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTP 287 P P LP A + P P +P + A +P P P A I PP P G+ P Sbjct: 1131 PPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP 1186 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/51 (35%), Positives = 22/51 (43%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + A +P P P A I PP P G Sbjct: 955 PPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1005 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/51 (35%), Positives = 22/51 (43%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + A +P P P A I PP P G Sbjct: 977 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1027 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/51 (35%), Positives = 22/51 (43%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + A +P P P A I PP P G Sbjct: 988 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1038 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/51 (35%), Positives = 22/51 (43%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + A +P P P A I PP P G Sbjct: 999 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1049 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/51 (35%), Positives = 22/51 (43%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + A +P P P A I PP P G Sbjct: 1010 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1060 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/51 (35%), Positives = 22/51 (43%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + A +P P P A I PP P G Sbjct: 1021 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1071 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/51 (35%), Positives = 22/51 (43%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + A +P P P A I PP P G Sbjct: 1032 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1082 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/51 (35%), Positives = 22/51 (43%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + A +P P P A I PP P G Sbjct: 1043 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1093 Score = 29.6 bits (65), Expect = 3.7 Identities = 18/51 (35%), Positives = 22/51 (43%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + A +P P P A I PP P G Sbjct: 1087 PPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1137 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/57 (31%), Positives = 23/57 (40%) Query: 226 PRIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P + P P LP A + P P +P + A +P P P I PP P G Sbjct: 1103 PGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPG 1159 Score = 28.5 bits (62), Expect = 8.3 Identities = 17/51 (33%), Positives = 21/51 (41%) Query: 232 PAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAG 282 P P LP A + P P +P + +P P P A I PP P G Sbjct: 1120 PPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPG 1170 >gi|139394646 iroquois homeobox protein 5 [Homo sapiens] Length = 483 Score = 35.4 bits (80), Expect = 0.068 Identities = 45/152 (29%), Positives = 57/152 (37%), Gaps = 14/152 (9%) Query: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196 +NR + E N DL ED + E K E AA G + L+ Sbjct: 182 RNRSEDEEEEENIDLEK--NDEDEPQKPEDKGDPEGPEAGGAEQKAASGCERLQGPPTPA 239 Query: 197 LAILNGTYRDANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLIR 256 G+ D++ K P L A Q PR GP+P P AA PA Sbjct: 240 GKETEGSLSDSDFKEPPSEGRLDAL-QGPPRT-GGPSPAGPAAARLAEDPAPH------- 290 Query: 257 QIQTAVMPNGTPHPTAAIVPPGPEA-GLIYTP 287 A P PHP A VPPGP +I++P Sbjct: 291 --YPAGAPAPGPHPAAGEVPPGPGGPSVIHSP 320 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.134 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,104,235 Number of Sequences: 37866 Number of extensions: 771649 Number of successful extensions: 3613 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 211 Number of HSP's that attempted gapping in prelim test: 3108 Number of HSP's gapped (non-prelim): 656 length of query: 319 length of database: 18,247,518 effective HSP length: 102 effective length of query: 217 effective length of database: 14,385,186 effective search space: 3121585362 effective search space used: 3121585362 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.