Guide to the Human Genome
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Name: DOPEY2 Sequence: fasta or formatted (2298aa) NCBI GI: 45827701
Description:

pad-1-like

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        159           4
 C cysteine            1.7         40           3
 D aspartate           4.5        103           2
 E glutamate           7.4        171           3
 F phenylalanine       4.1         95           3
 G glycine             3.9         89           2
 H histidine           2.4         55           2
 I isoleucine          4.1         95           2
 K lysine              5.3        121           2
 L leucine            14.4        330           5
 M methionine          1.5         34           2
 N asparagine          3.1         72           2
 P proline             5.3        121           3
 Q glutamine           4.8        110           2
 R arginine            5.0        116           2
 S serine             10.1        233           3
 T threonine           4.9        113           2
 V valine              6.5        150           2
 W tryptophan          1.1         25           1
 Y tyrosine            2.9         66           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pad-1-like 
DOPEY1                0.191   dopey family member 1 
RRP12                 0.002   ribosomal RNA processing 12 homolog isoform 2 [Homo...
TTC16                 0.002   tetratricopeptide repeat domain 16 
MACF1                 0.002   microfilament and actin filament cross-linker protei...
ARID5B                0.002   AT rich interactive domain 5B (MRF1-like) 
C15orf52              0.002   hypothetical protein LOC388115 
ACIN1                 0.002   apoptotic chromatin condensation inducer 1 
SAMD4B                0.002   sterile alpha motif domain containing 4B 
EML4                  0.002   echinoderm microtubule associated protein like 4 iso...
C6orf167              0.002   hypothetical protein LOC253714 
MUC16                 0.002   mucin 16 
DVL2                  0.002   dishevelled 2 
DSPP                  0.002   dentin sialophosphoprotein preproprotein 
TLE4                  0.002   transducin-like enhancer protein 4 
CLSPN                 0.002   claspin 
BUD13                 0.002   BUD13 homolog isoform 1 
POLQ                  0.002   DNA polymerase theta 
CADPS                 0.002   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.002   Ca2+-dependent secretion activator isoform 3 
ZC3H13                0.002   zinc finger CCCH-type containing 13 
CACNA1B               0.002   calcium channel, voltage-dependent, N type, alpha 1B ...
DACH2                 0.002   dachshund 2 isoform c 
DACH2                 0.002   dachshund 2 isoform b 
DACH2                 0.002   dachshund 2 isoform a 
MAST4                 0.002   microtubule associated serine/threonine kinase fami...
CADPS                 0.002   Ca2+-dependent secretion activator isoform 1 
NAF1                  0.002   nuclear assembly factor 1 homolog isoform b 
NAF1                  0.002   nuclear assembly factor 1 homolog isoform a 
EIF3E                 0.002   eukaryotic translation initiation factor 3, subunit 6...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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