Guide to the Human Genome
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Search of human proteins with 45643119

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1
[Homo sapiens]
         (364 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...   729   0.0  
gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom...   457   e-129
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo...   190   2e-48
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s...   190   2e-48
gi|221307494 chromodomain protein, Y chromosome-like isoform a [...   189   3e-48
gi|221136756 chromodomain protein, Y chromosome-like isoform d [...   189   3e-48
gi|221136753 chromodomain protein, Y chromosome-like isoform d [...   189   3e-48
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor...   187   2e-47
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s...   187   2e-47
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]       184   1e-46
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]        184   1e-46
gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]            175   5e-44
gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform...    79   6e-15
gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform...    79   6e-15
gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo...    78   1e-14
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ...    77   2e-14
gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens]       74   2e-13
gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform...    73   5e-13
gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform...    73   5e-13
gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform...    73   5e-13
gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform ...    73   5e-13
gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform...    73   5e-13
gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens]        72   8e-13
gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens]       71   1e-12
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas...    70   3e-12
gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo sa...    69   7e-12
gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo sa...    63   4e-10
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre...    49   5e-06
gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens]           48   2e-05
gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens]            48   2e-05

>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
           sapiens]
          Length = 364

 Score =  729 bits (1882), Expect = 0.0
 Identities = 364/364 (100%), Positives = 364/364 (100%)

Query: 1   MNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINK 60
           MNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINK
Sbjct: 1   MNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINK 60

Query: 61  AKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRKSTGFETLVVTSEDGI 120
           AKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRKSTGFETLVVTSEDGI
Sbjct: 61  AKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRKSTGFETLVVTSEDGI 120

Query: 121 TKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPP 180
           TKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPP
Sbjct: 121 TKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPP 180

Query: 181 GGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHT 240
           GGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHT
Sbjct: 181 GGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHT 240

Query: 241 PFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEV 300
           PFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEV
Sbjct: 241 PFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEV 300

Query: 301 WTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSR 360
           WTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSR
Sbjct: 301 WTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSR 360

Query: 361 KSKL 364
           KSKL
Sbjct: 361 KSKL 364


>gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Homo
           sapiens]
          Length = 227

 Score =  457 bits (1176), Expect = e-129
 Identities = 227/227 (100%), Positives = 227/227 (100%)

Query: 138 MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF 197
           MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF
Sbjct: 1   MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF 60

Query: 198 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF 257
           VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF
Sbjct: 61  VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF 120

Query: 258 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI 317
           PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI
Sbjct: 121 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI 180

Query: 318 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL 364
           SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL
Sbjct: 181 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL 227


>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
           a [Homo sapiens]
          Length = 540

 Score =  190 bits (482), Expect = 2e-48
 Identities = 103/261 (39%), Positives = 154/261 (59%), Gaps = 2/261 (0%)

Query: 102 TDRKSTGFETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLT 160
           T+  ST +  +VV  EDG T+I+ + R  +KNA+NTE+  EI+ AL +A+ DDS + + +
Sbjct: 277 TESAST-YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFS 335

Query: 161 GNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGIS 220
             G  +  G D   F           +      ++ FV  FI F KP++  VNGPA+G+ 
Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395

Query: 221 VTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGE 280
            ++L L D V+A+++A F TP++  GQSP+GCSS TFPK+M  A A EMLI G+KLTA E
Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455

Query: 281 ACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNV 340
           ACA+GLV++VF   TF +EV  ++K  A   P  L   K ++R   + +L   N  EC V
Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515

Query: 341 LQGRWLSDECTNAVVNFLSRK 361
           L+  W S +   +++ ++  K
Sbjct: 516 LRKIWSSAQGIESMLKYVENK 536


>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
           sapiens]
          Length = 540

 Score =  190 bits (482), Expect = 2e-48
 Identities = 103/261 (39%), Positives = 154/261 (59%), Gaps = 2/261 (0%)

Query: 102 TDRKSTGFETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLT 160
           T+  ST +  +VV  EDG T+I+ + R  +KNA+NTE+  EI+ AL +A+ DDS + + +
Sbjct: 277 TESAST-YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFS 335

Query: 161 GNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGIS 220
             G  +  G D   F           +      ++ FV  FI F KP++  VNGPA+G+ 
Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395

Query: 221 VTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGE 280
            ++L L D V+A+++A F TP++  GQSP+GCSS TFPK+M  A A EMLI G+KLTA E
Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455

Query: 281 ACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNV 340
           ACA+GLV++VF   TF +EV  ++K  A   P  L   K ++R   + +L   N  EC V
Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515

Query: 341 LQGRWLSDECTNAVVNFLSRK 361
           L+  W S +   +++ ++  K
Sbjct: 516 LRKIWSSAQGIESMLKYVENK 536


>gi|221307494 chromodomain protein, Y chromosome-like isoform a
           [Homo sapiens]
          Length = 544

 Score =  189 bits (480), Expect = 3e-48
 Identities = 99/254 (38%), Positives = 150/254 (59%), Gaps = 1/254 (0%)

Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167
           +  +VV  +DG T I+ + +  + N++N E+  E+  AL  A+ DDS + +L+  G  + 
Sbjct: 287 YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFC 346

Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227
            G D   F        + ++   A  +R FV  FI F KP+I  VNGPA+G+  ++L L 
Sbjct: 347 CGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLC 406

Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287
           D V+A+++A F TP++  GQSP+GCS+  FPKIM  A A EML+ G+KLTA EAC +GLV
Sbjct: 407 DVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLV 466

Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347
           ++VF   TF +EV  R+K  A   P  L  SK ++R   + +L   N  EC VL+  W S
Sbjct: 467 SQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGS 526

Query: 348 DECTNAVVNFLSRK 361
            +  ++++ +L RK
Sbjct: 527 AQGMDSMLKYLQRK 540


>gi|221136756 chromodomain protein, Y chromosome-like isoform d
           [Homo sapiens]
          Length = 412

 Score =  189 bits (480), Expect = 3e-48
 Identities = 99/254 (38%), Positives = 150/254 (59%), Gaps = 1/254 (0%)

Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167
           +  +VV  +DG T I+ + +  + N++N E+  E+  AL  A+ DDS + +L+  G  + 
Sbjct: 155 YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFC 214

Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227
            G D   F        + ++   A  +R FV  FI F KP+I  VNGPA+G+  ++L L 
Sbjct: 215 CGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLC 274

Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287
           D V+A+++A F TP++  GQSP+GCS+  FPKIM  A A EML+ G+KLTA EAC +GLV
Sbjct: 275 DVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLV 334

Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347
           ++VF   TF +EV  R+K  A   P  L  SK ++R   + +L   N  EC VL+  W S
Sbjct: 335 SQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGS 394

Query: 348 DECTNAVVNFLSRK 361
            +  ++++ +L RK
Sbjct: 395 AQGMDSMLKYLQRK 408


>gi|221136753 chromodomain protein, Y chromosome-like isoform d
           [Homo sapiens]
          Length = 412

 Score =  189 bits (480), Expect = 3e-48
 Identities = 99/254 (38%), Positives = 150/254 (59%), Gaps = 1/254 (0%)

Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167
           +  +VV  +DG T I+ + +  + N++N E+  E+  AL  A+ DDS + +L+  G  + 
Sbjct: 155 YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFC 214

Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227
            G D   F        + ++   A  +R FV  FI F KP+I  VNGPA+G+  ++L L 
Sbjct: 215 CGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLC 274

Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287
           D V+A+++A F TP++  GQSP+GCS+  FPKIM  A A EML+ G+KLTA EAC +GLV
Sbjct: 275 DVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLV 334

Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347
           ++VF   TF +EV  R+K  A   P  L  SK ++R   + +L   N  EC VL+  W S
Sbjct: 335 SQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGS 394

Query: 348 DECTNAVVNFLSRK 361
            +  ++++ +L RK
Sbjct: 395 AQGMDSMLKYLQRK 408


>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
           [Homo sapiens]
          Length = 554

 Score =  187 bits (474), Expect = 2e-47
 Identities = 102/247 (41%), Positives = 147/247 (59%), Gaps = 2/247 (0%)

Query: 102 TDRKSTGFETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLT 160
           T+  ST +  +VV  EDG T+I+ + R  +KNA+NTE+  EI+ AL +A+ DDS + + +
Sbjct: 277 TESAST-YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFS 335

Query: 161 GNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGIS 220
             G  +  G D   F           +      ++ FV  FI F KP++  VNGPA+G+ 
Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395

Query: 221 VTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGE 280
            ++L L D V+A+++A F TP++  GQSP+GCSS TFPK+M  A A EMLI G+KLTA E
Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455

Query: 281 ACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNV 340
           ACA+GLV++VF   TF +EV  ++K  A   P  L   K ++R   + +L   N  EC V
Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515

Query: 341 LQGRWLS 347
           L+  W S
Sbjct: 516 LRKIWSS 522


>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
           sapiens]
          Length = 554

 Score =  187 bits (474), Expect = 2e-47
 Identities = 102/247 (41%), Positives = 147/247 (59%), Gaps = 2/247 (0%)

Query: 102 TDRKSTGFETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLT 160
           T+  ST +  +VV  EDG T+I+ + R  +KNA+NTE+  EI+ AL +A+ DDS + + +
Sbjct: 277 TESAST-YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFS 335

Query: 161 GNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGIS 220
             G  +  G D   F           +      ++ FV  FI F KP++  VNGPA+G+ 
Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395

Query: 221 VTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGE 280
            ++L L D V+A+++A F TP++  GQSP+GCSS TFPK+M  A A EMLI G+KLTA E
Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455

Query: 281 ACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNV 340
           ACA+GLV++VF   TF +EV  ++K  A   P  L   K ++R   + +L   N  EC V
Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515

Query: 341 LQGRWLS 347
           L+  W S
Sbjct: 516 LRKIWSS 522


>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
          Length = 541

 Score =  184 bits (467), Expect = 1e-46
 Identities = 98/254 (38%), Positives = 149/254 (58%), Gaps = 1/254 (0%)

Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167
           +  +VV  EDG T+I+ + R  +KNA+NTE+  E++ AL +A+ DDS + + +  G  + 
Sbjct: 284 YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFC 343

Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227
            G D   F           +      ++ FV  FI F KP++  VNGPA+G+  ++L L 
Sbjct: 344 CGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLC 403

Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287
           D V+A+++A F TP++  GQSP+GCSS TFPK+M  A A EMLI G+KLTA EACA+GLV
Sbjct: 404 DLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLV 463

Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347
           ++VF   TF +EV  ++K  A      L   K ++R   + +L   N  EC VL+  W S
Sbjct: 464 SQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSS 523

Query: 348 DECTNAVVNFLSRK 361
            +   +++ ++  K
Sbjct: 524 AQGIESMLKYVENK 537


>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
          Length = 541

 Score =  184 bits (467), Expect = 1e-46
 Identities = 98/254 (38%), Positives = 149/254 (58%), Gaps = 1/254 (0%)

Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167
           +  +VV  EDG T+I+ + R  +KNA+NTE+  E++ AL +A+ DDS + + +  G  + 
Sbjct: 284 YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFC 343

Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227
            G D   F           +      ++ FV  FI F KP++  VNGPA+G+  ++L L 
Sbjct: 344 CGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLC 403

Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287
           D V+A+++A F TP++  GQSP+GCSS TFPK+M  A A EMLI G+KLTA EACA+GLV
Sbjct: 404 DLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLV 463

Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347
           ++VF   TF +EV  ++K  A      L   K ++R   + +L   N  EC VL+  W S
Sbjct: 464 SQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSS 523

Query: 348 DECTNAVVNFLSRK 361
            +   +++ ++  K
Sbjct: 524 AQGIESMLKYVENK 537


>gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]
          Length = 506

 Score =  175 bits (444), Expect = 5e-44
 Identities = 96/254 (37%), Positives = 151/254 (59%), Gaps = 1/254 (0%)

Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167
           F  +VV  E+G T I+ + +    NA+  E+  E+ RAL  A+ DDS + +L+  G  + 
Sbjct: 249 FRDIVVRKEEGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATDDSKLLLLSAVGSVFC 308

Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227
           SG D +           +++   A  +R+FV  FI F KP++  +NGPA+G+  ++L L 
Sbjct: 309 SGLDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLC 368

Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287
           D V+AS++A F TP++ +  +P GCSSYTFP+I+  A A EML  G+KLTA EAC++GLV
Sbjct: 369 DIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLV 428

Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347
           ++VF  +TF +EV  R+K  A      L  SK ++R   +  L  VN +EC +L+  W S
Sbjct: 429 SQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSS 488

Query: 348 DECTNAVVNFLSRK 361
            +  +++ ++L  K
Sbjct: 489 SKGLDSLFSYLQDK 502


>gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform 2
           [Homo sapiens]
          Length = 490

 Score = 79.0 bits (193), Expect = 6e-15
 Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 4/91 (4%)

Query: 13  FENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNA 68
           FE ++  ++ L K+    P NE+ LK Y+ YKQATEGPC + +PG +D I + KWDAW++
Sbjct: 12  FEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSS 71

Query: 69  LGSLPKEAARQNYVDLVSSLSPSLESSSQVE 99
           LG + KE A   YV+ +  +  ++  + +VE
Sbjct: 72  LGDMTKEEAMIAYVEEMKKIIETMPMTEKVE 102


>gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform 1
           [Homo sapiens]
          Length = 525

 Score = 79.0 bits (193), Expect = 6e-15
 Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 4/91 (4%)

Query: 13  FENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNA 68
           FE ++  ++ L K+    P NE+ LK Y+ YKQATEGPC + +PG +D I + KWDAW++
Sbjct: 47  FEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSS 106

Query: 69  LGSLPKEAARQNYVDLVSSLSPSLESSSQVE 99
           LG + KE A   YV+ +  +  ++  + +VE
Sbjct: 107 LGDMTKEEAMIAYVEEMKKIIETMPMTEKVE 137


>gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo
           sapiens]
          Length = 303

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 15/214 (7%)

Query: 118 DGITKIMFNRPKKKNAINTEMYHEIMR-ALKAASKDDSIITVLTGNGDYYSSGNDLTNFT 176
           DGI  I+ + PKK+N ++  M   +    L  A  +D  + +++  G  +SSG+DL   T
Sbjct: 54  DGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELT 113

Query: 177 DIPPGGVEEKAKNNAVLLREFVGCFI---DFPKPLIAVVNGPAVGISVTLLGLFDAVYAS 233
           +      E+    +A + +      +   + P P+IA+VNG A      L+   D   AS
Sbjct: 114 E------EQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVAS 167

Query: 234 DRATFHTPFSHLGQSPEGCSS--YTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVF 291
           D+++F TP  ++G     CS+      + +    A EML  G+ ++A EA   GL+++V 
Sbjct: 168 DKSSFATPGVNVGLF---CSTPGVALARAVPRKVALEMLFTGEPISAQEALLHGLLSKVV 224

Query: 292 PDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKR 325
           P++  Q+E     +  A L    + + K    K+
Sbjct: 225 PEAELQEETMRIARKIASLSRPVVSLGKATFYKQ 258


>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
           [Homo sapiens]
          Length = 328

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 21/281 (7%)

Query: 72  LPKEAARQNYVDLVSSL----SPSLESSSQVEPGTDRKSTGFETLVVTS-EDGITKIMFN 126
           L +     NY  L  SL    S + E +S V  G +     +E+L VTS +  +  +  N
Sbjct: 15  LTRRLTGSNYPGLSISLRLTGSSAQEEASGVALG-EAPDHSYESLRVTSAQKHVLHVQLN 73

Query: 127 RPKKKNAINTEMYHEIMRALKAASKD-DSIITVLTGNGDYYSSGNDLTNFTD--IPPGGV 183
           RP K+NA+N   + E++      S+D D    V++G G  +++G DL +     + P G 
Sbjct: 74  RPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKG- 132

Query: 184 EEKAKNNAVLLREFVGCFIDF-------PKPLIAVVNGPAVGISVTLLGLFDAVYASDRA 236
            +     +  LR+ +  + +        PKP+IA V+G  +G  V L+   D  Y +  A
Sbjct: 133 -DDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDA 191

Query: 237 TFHTPFSHLGQSPEGCSSYTFPKIM-SPAKATEMLIFGKKLTAGEACAQGLVTEVFPDST 295
            F      +G + +  +    PK++ + +   E+    +K+ A EA   GLV+ VFPD  
Sbjct: 192 FFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKE 251

Query: 296 FQKEVWTRLKA-FAKLPPNALRISK-EVIRKREREKLHAVN 334
              +    L A  +   P A++ +K  ++  R+     ++N
Sbjct: 252 VMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLN 292


>gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens]
          Length = 87

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 36/80 (45%), Positives = 47/80 (58%)

Query: 9  SQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNA 68
          SQ +FE +  +V+ LK  P +E  L +Y  YKQAT G  N  +PG+ D   KAKWDAWN 
Sbjct: 2  SQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 61

Query: 69 LGSLPKEAARQNYVDLVSSL 88
          L    KE A + Y++ V  L
Sbjct: 62 LKGTSKEDAMKAYINKVEEL 81


>gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform
          3 [Homo sapiens]
          Length = 268

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%)

Query: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65
          QK F+ +++ ++ L K+    P  E  L+ Y+ YKQAT GPC +P+PG +D I + KWDA
Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72

Query: 66 WNALGSLPKEAARQNYV 82
          WN+LG + +E A   Y+
Sbjct: 73 WNSLGKMSREEAMSAYI 89


>gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform
          1 [Homo sapiens]
          Length = 341

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%)

Query: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65
          QK F+ +++ ++ L K+    P  E  L+ Y+ YKQAT GPC +P+PG +D I + KWDA
Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72

Query: 66 WNALGSLPKEAARQNYV 82
          WN+LG + +E A   Y+
Sbjct: 73 WNSLGKMSREEAMSAYI 89


>gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform
          2 [Homo sapiens]
          Length = 305

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%)

Query: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65
          QK F+ +++ ++ L K+    P  E  L+ Y+ YKQAT GPC +P+PG +D I + KWDA
Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72

Query: 66 WNALGSLPKEAARQNYV 82
          WN+LG + +E A   Y+
Sbjct: 73 WNSLGKMSREEAMSAYI 89


>gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform 2
          [Homo sapiens]
          Length = 305

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%)

Query: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65
          QK F+ +++ ++ L K+    P  E  L+ Y+ YKQAT GPC +P+PG +D I + KWDA
Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72

Query: 66 WNALGSLPKEAARQNYV 82
          WN+LG + +E A   Y+
Sbjct: 73 WNSLGKMSREEAMSAYI 89


>gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform
          1 [Homo sapiens]
          Length = 341

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%)

Query: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65
          QK F+ +++ ++ L K+    P  E  L+ Y+ YKQAT GPC +P+PG +D I + KWDA
Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72

Query: 66 WNALGSLPKEAARQNYV 82
          WN+LG + +E A   Y+
Sbjct: 73 WNSLGKMSREEAMSAYI 89


>gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens]
          Length = 104

 Score = 72.0 bits (175), Expect = 8e-13
 Identities = 34/80 (42%), Positives = 47/80 (58%)

Query: 9  SQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNA 68
          ++ +FE +  +V+ LK  P +E  L +Y  YKQAT G  N  +PG+ D   KAKWDAWN 
Sbjct: 19 TEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 78

Query: 69 LGSLPKEAARQNYVDLVSSL 88
          L    KE A + Y++ V  L
Sbjct: 79 LKGTSKEDAMKAYINKVEEL 98


>gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens]
          Length = 88

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 34/77 (44%), Positives = 45/77 (58%)

Query: 12 DFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGS 71
          +FE +  +V+ LK  P +E  L +Y  YKQAT G  N  +PG+ D   KAKWDAWN L  
Sbjct: 6  EFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKG 65

Query: 72 LPKEAARQNYVDLVSSL 88
            KE A + Y++ V  L
Sbjct: 66 TSKEDAMKAYINKVEEL 82


>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
           precursor [Homo sapiens]
          Length = 290

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 7/240 (2%)

Query: 123 IMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPG 181
           I  NRPK  NA+   +  E+ +ALK   +D ++   VLTG    +++G D+    ++   
Sbjct: 50  IQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNL--- 106

Query: 182 GVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTP 241
               +   ++  L+ +        KP+IA VNG A G    L  + D +YA ++A F  P
Sbjct: 107 --SFQDCYSSKFLKHW-DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQP 163

Query: 242 FSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVW 301
              +G  P    +    + +  + A EM++ G +++A +A   GLV+++ P  T  +E  
Sbjct: 164 EILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAI 223

Query: 302 TRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 361
              +  A      + ++KE +       L   +  E  +    + +D+    +  F+ ++
Sbjct: 224 QCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKR 283


>gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo
           sapiens]
          Length = 282

 Score = 68.9 bits (167), Expect = 7e-12
 Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 13  FENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSL 72
           FE +   ++ L +    E  L LYA YKQ   G CN PKP  FD   K KW+AW ALG  
Sbjct: 46  FEKAAAHLQGLIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDS 105

Query: 73  PKEAARQNYVDLVSSLSPSLESSSQVEPGTDRKSTGFETLVVTS 116
               A Q Y+ +V  L P        + G +  +TGF   V++S
Sbjct: 106 SPSQAMQEYIAVVKKLDPGWNPQIPEKKGKE-ANTGFGGPVISS 148


>gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo
          sapiens]
          Length = 88

 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 33/81 (40%), Positives = 42/81 (51%)

Query: 8  ASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWN 67
          A Q DF+ +   V+ LK  P +    +LY LYKQA  G  N+  PG+ DL  KAKW+AWN
Sbjct: 2  ALQADFDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWN 61

Query: 68 ALGSLPKEAARQNYVDLVSSL 88
              L  E A   Y+     L
Sbjct: 62 LKKGLSTEDATSAYISKAKEL 82


>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
           precursor [Homo sapiens]
          Length = 339

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 12/213 (5%)

Query: 119 GITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNG--DYYSSGNDLTNFT 176
           GI  +  NR   KN+++  +   + +A+ A   D  + T++  +     + +G DL    
Sbjct: 88  GIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERA 147

Query: 177 DIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRA 236
            +    V          +R  +    + P P IA ++G A+G  + L    D   A+  A
Sbjct: 148 KMSSSEVGPFVSK----IRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSA 203

Query: 237 TFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFP---- 292
                 + L   P G  +   P+ +  + A E++   + L   EA A GL++ V      
Sbjct: 204 KMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQE 263

Query: 293 -DSTFQKEVWTRLKAFAKLPPNALRISKEVIRK 324
            D+ ++K +    + F    P A+R++K  I +
Sbjct: 264 GDAAYRKAL-DLAREFLPQGPVAMRVAKLAINQ 295


>gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens]
          Length = 88

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 27/79 (34%), Positives = 39/79 (49%)

Query: 10 QKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNAL 69
          Q DF+     V+ LK  P +E   +LY LYKQA  G  N+    + +L  KAKW+A N  
Sbjct: 4  QADFDMVTEDVRKLKTRPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQ 63

Query: 70 GSLPKEAARQNYVDLVSSL 88
            L +E   + ++     L
Sbjct: 64 KGLSEEDMMRAFISKAEEL 82


>gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens]
          Length = 88

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 27/79 (34%), Positives = 39/79 (49%)

Query: 10 QKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNAL 69
          Q DF+     V+ LK  P +E   +LY LYKQA  G  N+    + +L  KAKW+A N  
Sbjct: 4  QADFDMVTEDVRKLKTRPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQ 63

Query: 70 GSLPKEAARQNYVDLVSSL 88
            L +E   + ++     L
Sbjct: 64 KGLSEEDMMRAFISKAEEL 82


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,990,250
Number of Sequences: 37866
Number of extensions: 614009
Number of successful extensions: 1686
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1634
Number of HSP's gapped (non-prelim): 43
length of query: 364
length of database: 18,247,518
effective HSP length: 104
effective length of query: 260
effective length of database: 14,309,454
effective search space: 3720458040
effective search space used: 3720458040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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