BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo sapiens] (364 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 729 0.0 gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom... 457 e-129 gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 190 2e-48 gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 190 2e-48 gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 189 3e-48 gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 189 3e-48 gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 189 3e-48 gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 187 2e-47 gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 187 2e-47 gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 184 1e-46 gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 184 1e-46 gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 175 5e-44 gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform... 79 6e-15 gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform... 79 6e-15 gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo... 78 1e-14 gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 77 2e-14 gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens] 74 2e-13 gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform... 73 5e-13 gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform... 73 5e-13 gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform... 73 5e-13 gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform ... 73 5e-13 gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform... 73 5e-13 gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens] 72 8e-13 gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens] 71 1e-12 gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 70 3e-12 gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo sa... 69 7e-12 gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo sa... 63 4e-10 gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 49 5e-06 gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens] 48 2e-05 gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens] 48 2e-05 >gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo sapiens] Length = 364 Score = 729 bits (1882), Expect = 0.0 Identities = 364/364 (100%), Positives = 364/364 (100%) Query: 1 MNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINK 60 MNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINK Sbjct: 1 MNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINK 60 Query: 61 AKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRKSTGFETLVVTSEDGI 120 AKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRKSTGFETLVVTSEDGI Sbjct: 61 AKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRKSTGFETLVVTSEDGI 120 Query: 121 TKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPP 180 TKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPP Sbjct: 121 TKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPP 180 Query: 181 GGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHT 240 GGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHT Sbjct: 181 GGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHT 240 Query: 241 PFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEV 300 PFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEV Sbjct: 241 PFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEV 300 Query: 301 WTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSR 360 WTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSR Sbjct: 301 WTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSR 360 Query: 361 KSKL 364 KSKL Sbjct: 361 KSKL 364 >gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Homo sapiens] Length = 227 Score = 457 bits (1176), Expect = e-129 Identities = 227/227 (100%), Positives = 227/227 (100%) Query: 138 MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF 197 MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF Sbjct: 1 MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF 60 Query: 198 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF 257 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF Sbjct: 61 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF 120 Query: 258 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI 317 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI Sbjct: 121 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI 180 Query: 318 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL 364 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL Sbjct: 181 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL 227 >gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform a [Homo sapiens] Length = 540 Score = 190 bits (482), Expect = 2e-48 Identities = 103/261 (39%), Positives = 154/261 (59%), Gaps = 2/261 (0%) Query: 102 TDRKSTGFETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLT 160 T+ ST + +VV EDG T+I+ + R +KNA+NTE+ EI+ AL +A+ DDS + + + Sbjct: 277 TESAST-YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFS 335 Query: 161 GNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGIS 220 G + G D F + ++ FV FI F KP++ VNGPA+G+ Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395 Query: 221 VTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGE 280 ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+M A A EMLI G+KLTA E Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455 Query: 281 ACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNV 340 ACA+GLV++VF TF +EV ++K A P L K ++R + +L N EC V Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515 Query: 341 LQGRWLSDECTNAVVNFLSRK 361 L+ W S + +++ ++ K Sbjct: 516 LRKIWSSAQGIESMLKYVENK 536 >gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo sapiens] Length = 540 Score = 190 bits (482), Expect = 2e-48 Identities = 103/261 (39%), Positives = 154/261 (59%), Gaps = 2/261 (0%) Query: 102 TDRKSTGFETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLT 160 T+ ST + +VV EDG T+I+ + R +KNA+NTE+ EI+ AL +A+ DDS + + + Sbjct: 277 TESAST-YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFS 335 Query: 161 GNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGIS 220 G + G D F + ++ FV FI F KP++ VNGPA+G+ Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395 Query: 221 VTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGE 280 ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+M A A EMLI G+KLTA E Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455 Query: 281 ACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNV 340 ACA+GLV++VF TF +EV ++K A P L K ++R + +L N EC V Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515 Query: 341 LQGRWLSDECTNAVVNFLSRK 361 L+ W S + +++ ++ K Sbjct: 516 LRKIWSSAQGIESMLKYVENK 536 >gi|221307494 chromodomain protein, Y chromosome-like isoform a [Homo sapiens] Length = 544 Score = 189 bits (480), Expect = 3e-48 Identities = 99/254 (38%), Positives = 150/254 (59%), Gaps = 1/254 (0%) Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167 + +VV +DG T I+ + + + N++N E+ E+ AL A+ DDS + +L+ G + Sbjct: 287 YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFC 346 Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227 G D F + ++ A +R FV FI F KP+I VNGPA+G+ ++L L Sbjct: 347 CGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLC 406 Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287 D V+A+++A F TP++ GQSP+GCS+ FPKIM A A EML+ G+KLTA EAC +GLV Sbjct: 407 DVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLV 466 Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347 ++VF TF +EV R+K A P L SK ++R + +L N EC VL+ W S Sbjct: 467 SQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGS 526 Query: 348 DECTNAVVNFLSRK 361 + ++++ +L RK Sbjct: 527 AQGMDSMLKYLQRK 540 >gi|221136756 chromodomain protein, Y chromosome-like isoform d [Homo sapiens] Length = 412 Score = 189 bits (480), Expect = 3e-48 Identities = 99/254 (38%), Positives = 150/254 (59%), Gaps = 1/254 (0%) Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167 + +VV +DG T I+ + + + N++N E+ E+ AL A+ DDS + +L+ G + Sbjct: 155 YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFC 214 Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227 G D F + ++ A +R FV FI F KP+I VNGPA+G+ ++L L Sbjct: 215 CGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLC 274 Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287 D V+A+++A F TP++ GQSP+GCS+ FPKIM A A EML+ G+KLTA EAC +GLV Sbjct: 275 DVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLV 334 Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347 ++VF TF +EV R+K A P L SK ++R + +L N EC VL+ W S Sbjct: 335 SQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGS 394 Query: 348 DECTNAVVNFLSRK 361 + ++++ +L RK Sbjct: 395 AQGMDSMLKYLQRK 408 >gi|221136753 chromodomain protein, Y chromosome-like isoform d [Homo sapiens] Length = 412 Score = 189 bits (480), Expect = 3e-48 Identities = 99/254 (38%), Positives = 150/254 (59%), Gaps = 1/254 (0%) Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167 + +VV +DG T I+ + + + N++N E+ E+ AL A+ DDS + +L+ G + Sbjct: 155 YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFC 214 Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227 G D F + ++ A +R FV FI F KP+I VNGPA+G+ ++L L Sbjct: 215 CGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLC 274 Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287 D V+A+++A F TP++ GQSP+GCS+ FPKIM A A EML+ G+KLTA EAC +GLV Sbjct: 275 DVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLV 334 Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347 ++VF TF +EV R+K A P L SK ++R + +L N EC VL+ W S Sbjct: 335 SQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGS 394 Query: 348 DECTNAVVNFLSRK 361 + ++++ +L RK Sbjct: 395 AQGMDSMLKYLQRK 408 >gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b [Homo sapiens] Length = 554 Score = 187 bits (474), Expect = 2e-47 Identities = 102/247 (41%), Positives = 147/247 (59%), Gaps = 2/247 (0%) Query: 102 TDRKSTGFETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLT 160 T+ ST + +VV EDG T+I+ + R +KNA+NTE+ EI+ AL +A+ DDS + + + Sbjct: 277 TESAST-YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFS 335 Query: 161 GNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGIS 220 G + G D F + ++ FV FI F KP++ VNGPA+G+ Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395 Query: 221 VTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGE 280 ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+M A A EMLI G+KLTA E Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455 Query: 281 ACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNV 340 ACA+GLV++VF TF +EV ++K A P L K ++R + +L N EC V Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515 Query: 341 LQGRWLS 347 L+ W S Sbjct: 516 LRKIWSS 522 >gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo sapiens] Length = 554 Score = 187 bits (474), Expect = 2e-47 Identities = 102/247 (41%), Positives = 147/247 (59%), Gaps = 2/247 (0%) Query: 102 TDRKSTGFETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLT 160 T+ ST + +VV EDG T+I+ + R +KNA+NTE+ EI+ AL +A+ DDS + + + Sbjct: 277 TESAST-YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFS 335 Query: 161 GNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGIS 220 G + G D F + ++ FV FI F KP++ VNGPA+G+ Sbjct: 336 AAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLG 395 Query: 221 VTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGE 280 ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+M A A EMLI G+KLTA E Sbjct: 396 ASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTARE 455 Query: 281 ACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNV 340 ACA+GLV++VF TF +EV ++K A P L K ++R + +L N EC V Sbjct: 456 ACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEV 515 Query: 341 LQGRWLS 347 L+ W S Sbjct: 516 LRKIWSS 522 >gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] Length = 541 Score = 184 bits (467), Expect = 1e-46 Identities = 98/254 (38%), Positives = 149/254 (58%), Gaps = 1/254 (0%) Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167 + +VV EDG T+I+ + R +KNA+NTE+ E++ AL +A+ DDS + + + G + Sbjct: 284 YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFC 343 Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227 G D F + ++ FV FI F KP++ VNGPA+G+ ++L L Sbjct: 344 CGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLC 403 Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287 D V+A+++A F TP++ GQSP+GCSS TFPK+M A A EMLI G+KLTA EACA+GLV Sbjct: 404 DLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLV 463 Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347 ++VF TF +EV ++K A L K ++R + +L N EC VL+ W S Sbjct: 464 SQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSS 523 Query: 348 DECTNAVVNFLSRK 361 + +++ ++ K Sbjct: 524 AQGIESMLKYVENK 537 >gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] Length = 541 Score = 184 bits (467), Expect = 1e-46 Identities = 98/254 (38%), Positives = 149/254 (58%), Gaps = 1/254 (0%) Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167 + +VV EDG T+I+ + R +KNA+NTE+ E++ AL +A+ DDS + + + G + Sbjct: 284 YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFC 343 Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227 G D F + ++ FV FI F KP++ VNGPA+G+ ++L L Sbjct: 344 CGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLC 403 Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287 D V+A+++A F TP++ GQSP+GCSS TFPK+M A A EMLI G+KLTA EACA+GLV Sbjct: 404 DLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLV 463 Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347 ++VF TF +EV ++K A L K ++R + +L N EC VL+ W S Sbjct: 464 SQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSS 523 Query: 348 DECTNAVVNFLSRK 361 + +++ ++ K Sbjct: 524 AQGIESMLKYVENK 537 >gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] Length = 506 Score = 175 bits (444), Expect = 5e-44 Identities = 96/254 (37%), Positives = 151/254 (59%), Gaps = 1/254 (0%) Query: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167 F +VV E+G T I+ + + NA+ E+ E+ RAL A+ DDS + +L+ G + Sbjct: 249 FRDIVVRKEEGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATDDSKLLLLSAVGSVFC 308 Query: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227 SG D + +++ A +R+FV FI F KP++ +NGPA+G+ ++L L Sbjct: 309 SGLDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLC 368 Query: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287 D V+AS++A F TP++ + +P GCSSYTFP+I+ A A EML G+KLTA EAC++GLV Sbjct: 369 DIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLV 428 Query: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347 ++VF +TF +EV R+K A L SK ++R + L VN +EC +L+ W S Sbjct: 429 SQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSS 488 Query: 348 DECTNAVVNFLSRK 361 + +++ ++L K Sbjct: 489 SKGLDSLFSYLQDK 502 >gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform 2 [Homo sapiens] Length = 490 Score = 79.0 bits (193), Expect = 6e-15 Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 4/91 (4%) Query: 13 FENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNA 68 FE ++ ++ L K+ P NE+ LK Y+ YKQATEGPC + +PG +D I + KWDAW++ Sbjct: 12 FEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSS 71 Query: 69 LGSLPKEAARQNYVDLVSSLSPSLESSSQVE 99 LG + KE A YV+ + + ++ + +VE Sbjct: 72 LGDMTKEEAMIAYVEEMKKIIETMPMTEKVE 102 >gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform 1 [Homo sapiens] Length = 525 Score = 79.0 bits (193), Expect = 6e-15 Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 4/91 (4%) Query: 13 FENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNA 68 FE ++ ++ L K+ P NE+ LK Y+ YKQATEGPC + +PG +D I + KWDAW++ Sbjct: 47 FEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSS 106 Query: 69 LGSLPKEAARQNYVDLVSSLSPSLESSSQVE 99 LG + KE A YV+ + + ++ + +VE Sbjct: 107 LGDMTKEEAMIAYVEEMKKIIETMPMTEKVE 137 >gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo sapiens] Length = 303 Score = 78.2 bits (191), Expect = 1e-14 Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 15/214 (7%) Query: 118 DGITKIMFNRPKKKNAINTEMYHEIMR-ALKAASKDDSIITVLTGNGDYYSSGNDLTNFT 176 DGI I+ + PKK+N ++ M + L A +D + +++ G +SSG+DL T Sbjct: 54 DGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELT 113 Query: 177 DIPPGGVEEKAKNNAVLLREFVGCFI---DFPKPLIAVVNGPAVGISVTLLGLFDAVYAS 233 + E+ +A + + + + P P+IA+VNG A L+ D AS Sbjct: 114 E------EQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVAS 167 Query: 234 DRATFHTPFSHLGQSPEGCSS--YTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVF 291 D+++F TP ++G CS+ + + A EML G+ ++A EA GL+++V Sbjct: 168 DKSSFATPGVNVGLF---CSTPGVALARAVPRKVALEMLFTGEPISAQEALLHGLLSKVV 224 Query: 292 PDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKR 325 P++ Q+E + A L + + K K+ Sbjct: 225 PEAELQEETMRIARKIASLSRPVVSLGKATFYKQ 258 >gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein [Homo sapiens] Length = 328 Score = 77.4 bits (189), Expect = 2e-14 Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 21/281 (7%) Query: 72 LPKEAARQNYVDLVSSL----SPSLESSSQVEPGTDRKSTGFETLVVTS-EDGITKIMFN 126 L + NY L SL S + E +S V G + +E+L VTS + + + N Sbjct: 15 LTRRLTGSNYPGLSISLRLTGSSAQEEASGVALG-EAPDHSYESLRVTSAQKHVLHVQLN 73 Query: 127 RPKKKNAINTEMYHEIMRALKAASKD-DSIITVLTGNGDYYSSGNDLTNFTD--IPPGGV 183 RP K+NA+N + E++ S+D D V++G G +++G DL + + P G Sbjct: 74 RPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKG- 132 Query: 184 EEKAKNNAVLLREFVGCFIDF-------PKPLIAVVNGPAVGISVTLLGLFDAVYASDRA 236 + + LR+ + + + PKP+IA V+G +G V L+ D Y + A Sbjct: 133 -DDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDA 191 Query: 237 TFHTPFSHLGQSPEGCSSYTFPKIM-SPAKATEMLIFGKKLTAGEACAQGLVTEVFPDST 295 F +G + + + PK++ + + E+ +K+ A EA GLV+ VFPD Sbjct: 192 FFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKE 251 Query: 296 FQKEVWTRLKA-FAKLPPNALRISK-EVIRKREREKLHAVN 334 + L A + P A++ +K ++ R+ ++N Sbjct: 252 VMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLN 292 >gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens] Length = 87 Score = 74.3 bits (181), Expect = 2e-13 Identities = 36/80 (45%), Positives = 47/80 (58%) Query: 9 SQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNA 68 SQ +FE + +V+ LK P +E L +Y YKQAT G N +PG+ D KAKWDAWN Sbjct: 2 SQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 61 Query: 69 LGSLPKEAARQNYVDLVSSL 88 L KE A + Y++ V L Sbjct: 62 LKGTSKEDAMKAYINKVEEL 81 >gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform 3 [Homo sapiens] Length = 268 Score = 72.8 bits (177), Expect = 5e-13 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%) Query: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65 QK F+ +++ ++ L K+ P E L+ Y+ YKQAT GPC +P+PG +D I + KWDA Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72 Query: 66 WNALGSLPKEAARQNYV 82 WN+LG + +E A Y+ Sbjct: 73 WNSLGKMSREEAMSAYI 89 >gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform 1 [Homo sapiens] Length = 341 Score = 72.8 bits (177), Expect = 5e-13 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%) Query: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65 QK F+ +++ ++ L K+ P E L+ Y+ YKQAT GPC +P+PG +D I + KWDA Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72 Query: 66 WNALGSLPKEAARQNYV 82 WN+LG + +E A Y+ Sbjct: 73 WNSLGKMSREEAMSAYI 89 >gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform 2 [Homo sapiens] Length = 305 Score = 72.8 bits (177), Expect = 5e-13 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%) Query: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65 QK F+ +++ ++ L K+ P E L+ Y+ YKQAT GPC +P+PG +D I + KWDA Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72 Query: 66 WNALGSLPKEAARQNYV 82 WN+LG + +E A Y+ Sbjct: 73 WNSLGKMSREEAMSAYI 89 >gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform 2 [Homo sapiens] Length = 305 Score = 72.8 bits (177), Expect = 5e-13 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%) Query: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65 QK F+ +++ ++ L K+ P E L+ Y+ YKQAT GPC +P+PG +D I + KWDA Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72 Query: 66 WNALGSLPKEAARQNYV 82 WN+LG + +E A Y+ Sbjct: 73 WNSLGKMSREEAMSAYI 89 >gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform 1 [Homo sapiens] Length = 341 Score = 72.8 bits (177), Expect = 5e-13 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%) Query: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65 QK F+ +++ ++ L K+ P E L+ Y+ YKQAT GPC +P+PG +D I + KWDA Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72 Query: 66 WNALGSLPKEAARQNYV 82 WN+LG + +E A Y+ Sbjct: 73 WNSLGKMSREEAMSAYI 89 >gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens] Length = 104 Score = 72.0 bits (175), Expect = 8e-13 Identities = 34/80 (42%), Positives = 47/80 (58%) Query: 9 SQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNA 68 ++ +FE + +V+ LK P +E L +Y YKQAT G N +PG+ D KAKWDAWN Sbjct: 19 TEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 78 Query: 69 LGSLPKEAARQNYVDLVSSL 88 L KE A + Y++ V L Sbjct: 79 LKGTSKEDAMKAYINKVEEL 98 >gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens] Length = 88 Score = 71.2 bits (173), Expect = 1e-12 Identities = 34/77 (44%), Positives = 45/77 (58%) Query: 12 DFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGS 71 +FE + +V+ LK P +E L +Y YKQAT G N +PG+ D KAKWDAWN L Sbjct: 6 EFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKG 65 Query: 72 LPKEAARQNYVDLVSSL 88 KE A + Y++ V L Sbjct: 66 TSKEDAMKAYINKVEEL 82 >gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1 precursor [Homo sapiens] Length = 290 Score = 70.1 bits (170), Expect = 3e-12 Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 7/240 (2%) Query: 123 IMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPG 181 I NRPK NA+ + E+ +ALK +D ++ VLTG +++G D+ ++ Sbjct: 50 IQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNL--- 106 Query: 182 GVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTP 241 + ++ L+ + KP+IA VNG A G L + D +YA ++A F P Sbjct: 107 --SFQDCYSSKFLKHW-DHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQP 163 Query: 242 FSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVW 301 +G P + + + + A EM++ G +++A +A GLV+++ P T +E Sbjct: 164 EILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAI 223 Query: 302 TRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 361 + A + ++KE + L + E + + +D+ + F+ ++ Sbjct: 224 QCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKR 283 >gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo sapiens] Length = 282 Score = 68.9 bits (167), Expect = 7e-12 Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 13 FENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSL 72 FE + ++ L + E L LYA YKQ G CN PKP FD K KW+AW ALG Sbjct: 46 FEKAAAHLQGLIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDS 105 Query: 73 PKEAARQNYVDLVSSLSPSLESSSQVEPGTDRKSTGFETLVVTS 116 A Q Y+ +V L P + G + +TGF V++S Sbjct: 106 SPSQAMQEYIAVVKKLDPGWNPQIPEKKGKE-ANTGFGGPVISS 148 >gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo sapiens] Length = 88 Score = 63.2 bits (152), Expect = 4e-10 Identities = 33/81 (40%), Positives = 42/81 (51%) Query: 8 ASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWN 67 A Q DF+ + V+ LK P + +LY LYKQA G N+ PG+ DL KAKW+AWN Sbjct: 2 ALQADFDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWN 61 Query: 68 ALGSLPKEAARQNYVDLVSSL 88 L E A Y+ L Sbjct: 62 LKKGLSTEDATSAYISKAKEL 82 >gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase precursor [Homo sapiens] Length = 339 Score = 49.3 bits (116), Expect = 5e-06 Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 12/213 (5%) Query: 119 GITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNG--DYYSSGNDLTNFT 176 GI + NR KN+++ + + +A+ A D + T++ + + +G DL Sbjct: 88 GIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERA 147 Query: 177 DIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRA 236 + V +R + + P P IA ++G A+G + L D A+ A Sbjct: 148 KMSSSEVGPFVSK----IRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSA 203 Query: 237 TFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFP---- 292 + L P G + P+ + + A E++ + L EA A GL++ V Sbjct: 204 KMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQE 263 Query: 293 -DSTFQKEVWTRLKAFAKLPPNALRISKEVIRK 324 D+ ++K + + F P A+R++K I + Sbjct: 264 GDAAYRKAL-DLAREFLPQGPVAMRVAKLAINQ 295 >gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens] Length = 88 Score = 47.8 bits (112), Expect = 2e-05 Identities = 27/79 (34%), Positives = 39/79 (49%) Query: 10 QKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNAL 69 Q DF+ V+ LK P +E +LY LYKQA G N+ + +L KAKW+A N Sbjct: 4 QADFDMVTEDVRKLKTRPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQ 63 Query: 70 GSLPKEAARQNYVDLVSSL 88 L +E + ++ L Sbjct: 64 KGLSEEDMMRAFISKAEEL 82 >gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens] Length = 88 Score = 47.8 bits (112), Expect = 2e-05 Identities = 27/79 (34%), Positives = 39/79 (49%) Query: 10 QKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNAL 69 Q DF+ V+ LK P +E +LY LYKQA G N+ + +L KAKW+A N Sbjct: 4 QADFDMVTEDVRKLKTRPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQ 63 Query: 70 GSLPKEAARQNYVDLVSSL 88 L +E + ++ L Sbjct: 64 KGLSEEDMMRAFISKAEEL 82 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.131 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,990,250 Number of Sequences: 37866 Number of extensions: 614009 Number of successful extensions: 1686 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 1634 Number of HSP's gapped (non-prelim): 43 length of query: 364 length of database: 18,247,518 effective HSP length: 104 effective length of query: 260 effective length of database: 14,309,454 effective search space: 3720458040 effective search space used: 3720458040 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.