Guide to the Human Genome
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Name: ECHS1 Sequence: fasta or formatted (290aa) NCBI GI: 194097323
Description:

mitochondrial short-chain enoyl-coenzyme A hydratase 1 precursor

Referenced in:

Amino Acid Catabolism
Fatty Acid Oxidation and Ketone Bodies

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.1         38           2
 C cysteine            2.8          8           1
 D aspartate           4.5         13           2
 E glutamate           6.9         20           2
 F phenylalanine       4.5         13           1
 G glycine             7.9         23           3
 H histidine           0.7          2           1
 I isoleucine          5.9         17           2
 K lysine              8.3         24           2
 L leucine             8.6         25           2
 M methionine          3.1          9           2
 N asparagine          3.8         11           2
 P proline             3.8         11           2
 Q glutamine           4.1         12           1
 R arginine            4.1         12           1
 S serine              4.5         13           2
 T threonine           4.8         14           1
 V valine              6.2         18           2
 W tryptophan          0.7          2           1
 Y tyrosine            1.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial short-chain enoyl-coenzyme A hydratas... 
AUH                   0.207   AU RNA binding protein/enoyl-Coenzyme A hydratase pre...
ECHDC3                0.185   enoyl Coenzyme A hydratase domain containing 3 [Homo...
EHHADH                0.164   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
ECHDC2                0.136   enoyl Coenzyme A hydratase domain containing 2 [Hom...
ECH1                  0.136   peroxisomal enoyl-coenzyme A hydratase-like protein ...
HADHA                 0.131   mitochondrial trifunctional protein, alpha subunit p...
HIBCH                 0.129   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [...
HIBCH                 0.129   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [...
CDY1                  0.116   Y chromosome chromodomain protein 1, telomeric isofo...
CDY1B                 0.116   chromodomain protein, Y-linked, 1B isoform a 
CDYL                  0.113   chromodomain protein, Y chromosome-like isoform a [...
CDYL                  0.113   chromodomain protein, Y chromosome-like isoform d [...
CDYL                  0.113   chromodomain protein, Y chromosome-like isoform d [...
CDY2B                 0.113   Y chromosome chromodomain protein 2B 
CDY2A                 0.113   Y chromosome chromodomain protein 2A 
CDY1                  0.107   Y chromosome chromodomain protein 1, telomeric isofor...
CDY1B                 0.107   chromodomain protein, Y-linked, 1B isoform b 
CDYL2                 0.107   chromodomain protein, Y-like 2 
ECHDC1                0.091   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.091   enoyl Coenzyme A hydratase domain containing 1 isof...
PECI                  0.082   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
ECHDC1                0.067   enoyl Coenzyme A hydratase domain containing 1 isof...
PECI                  0.062   peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom...
DCI                   0.055   dodecenoyl-Coenzyme A delta isomerase precursor [Hom...
ECHDC1                0.016   enoyl Coenzyme A hydratase domain containing 1 isofo...
ARCN1                 0.013   archain isoform 1 
NOVA2                 0.009   neuro-oncological ventral antigen 2 
EPPK1                 0.009   epiplakin 1 
PLVAP                 0.009   plasmalemma vesicle associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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