Guide to the Human Genome
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Name: ECHDC3 Sequence: fasta or formatted (303aa) NCBI GI: 31542718
Description:

enoyl Coenzyme A hydratase domain containing 3

Referenced in:

Amino Acid Catabolism
Fatty Acid Oxidation and Ketone Bodies

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.9         36           2
 C cysteine            2.0          6           1
 D aspartate           4.3         13           1
 E glutamate           5.3         16           2
 F phenylalanine       3.0          9           1
 G glycine             6.6         20           1
 H histidine           2.3          7           1
 I isoleucine          4.3         13           3
 K lysine              4.6         14           2
 L leucine            10.6         32           2
 M methionine          3.0          9           2
 N asparagine          2.6          8           1
 P proline             6.3         19           1
 Q glutamine           4.3         13           1
 R arginine            6.6         20           2
 S serine              8.3         25           2
 T threonine           4.3         13           1
 V valine              7.9         24           2
 W tryptophan          0.7          2           1
 Y tyrosine            1.3          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   enoyl Coenzyme A hydratase domain containing 3 [Homo... 
ECHS1                 0.178   mitochondrial short-chain enoyl-coenzyme A hydratas...
AUH                   0.108   AU RNA binding protein/enoyl-Coenzyme A hydratase pre...
CDYL                  0.105   chromodomain protein, Y chromosome-like isoform a [...
CDYL                  0.105   chromodomain protein, Y chromosome-like isoform d [...
CDYL                  0.105   chromodomain protein, Y chromosome-like isoform d [...
CDYL2                 0.101   chromodomain protein, Y-like 2 
PECI                  0.093   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
CDY2B                 0.089   Y chromosome chromodomain protein 2B 
CDY2A                 0.089   Y chromosome chromodomain protein 2A 
ECHDC2                0.087   enoyl Coenzyme A hydratase domain containing 2 [Hom...
ECH1                  0.087   peroxisomal enoyl-coenzyme A hydratase-like protein ...
CDY1                  0.086   Y chromosome chromodomain protein 1, telomeric isofor...
CDY1                  0.086   Y chromosome chromodomain protein 1, telomeric isofo...
CDY1B                 0.086   chromodomain protein, Y-linked, 1B isoform b 
CDY1B                 0.086   chromodomain protein, Y-linked, 1B isoform a 
EHHADH                0.075   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
PECI                  0.068   peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom...
DCI                   0.068   dodecenoyl-Coenzyme A delta isomerase precursor [Hom...
HADHA                 0.061   mitochondrial trifunctional protein, alpha subunit p...
HIBCH                 0.052   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [...
HIBCH                 0.052   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [...
ECHDC1                0.047   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.047   enoyl Coenzyme A hydratase domain containing 1 isof...
RABEP1                0.012   rabaptin, RAB GTPase binding effector protein 1 iso...
ECHDC1                0.010   enoyl Coenzyme A hydratase domain containing 1 isofo...
HOXD4                 0.007   homeobox D4 
LOC100129129          0.007   PREDICTED: hypothetical protein 
C9orf96               0.007   hypothetical protein LOC169436 
GRIN3B                0.005   glutamate receptor, ionotropic, N-methyl-D-aspartate...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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