CDY1 24118

Name: CDY1	Sequence: fasta or formatted (540aa)		NCBI GI: 25453481
Description: Y chromosome chromodomain protein 1, telomeric isoform a		Referenced in: Nonhistone Chromosomal Proteins Y-linked Genes
Other entries for this name: alt prot [554aa] Y chromosome chromodomain protein 1, telomeric isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 40 3 C cysteine 1.9 10 2 D aspartate 5.2 28 2 E glutamate 6.1 33 2 F phenylalanine 4.3 23 1 G glycine 4.8 26 2 H histidine 1.7 9 2 I isoleucine 5.9 32 2 K lysine 8.7 47 2 L leucine 7.0 38 2 M methionine 2.6 14 2 N asparagine 5.7 31 2 P proline 3.5 19 1 Q glutamine 4.6 25 2 R arginine 5.4 29 3 S serine 7.8 42 2 T threonine 8.1 44 3 V valine 6.7 36 2 W tryptophan 1.1 6 1 Y tyrosine 1.5 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Y chromosome chromodomain protein 1, telomeric isofo... CDY1B 1.000 chromodomain protein, Y-linked, 1B isoform a CDY1 0.982 Y chromosome chromodomain protein 1, telomeric isofor... CDY1B 0.982 chromodomain protein, Y-linked, 1B isoform b CDY2B 0.976 Y chromosome chromodomain protein 2B CDY2A 0.976 Y chromosome chromodomain protein 2A CDYL 0.633 chromodomain protein, Y chromosome-like isoform a [... CDYL 0.473 chromodomain protein, Y chromosome-like isoform d [... CDYL 0.473 chromodomain protein, Y chromosome-like isoform d [... CDYL2 0.348 chromodomain protein, Y-like 2 PECI 0.157 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... PECI 0.133 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom... ECHS1 0.061 mitochondrial short-chain enoyl-coenzyme A hydratas... ECH1 0.053 peroxisomal enoyl-coenzyme A hydratase-like protein ... ECHDC3 0.047 enoyl Coenzyme A hydratase domain containing 3 [Homo... MPHOSPH8 0.040 M-phase phosphoprotein 8 AUH 0.037 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... EHHADH 0.031 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... HADHA 0.031 mitochondrial trifunctional protein, alpha subunit p... CBX3 0.029 chromobox homolog 3 CBX3 0.029 chromobox homolog 3 CBX5 0.029 heterochromatin protein 1-alpha CBX5 0.029 heterochromatin protein 1-alpha CBX5 0.029 heterochromatin protein 1-alpha ECHDC1 0.027 enoyl Coenzyme A hydratase domain containing 1 isof... ECHDC1 0.027 enoyl Coenzyme A hydratase domain containing 1 isof... CBX1 0.026 heterochromatin protein 1-beta CBX1 0.026 heterochromatin protein 1-beta ECHDC1 0.024 enoyl Coenzyme A hydratase domain containing 1 isof... HIBCH 0.023 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.