Guide to the Human Genome
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Name: CDYL Sequence: fasta or formatted (412aa) NCBI GI: 221136756
Description:

chromodomain protein, Y chromosome-like isoform d

Referenced in:

Nonhistone Chromosomal Proteins

Other entries for this name:
alt mRNA [412aa] chromodomain protein, Y chromosome-like isoform d
alt prot [544aa] chromodomain protein, Y chromosome-like isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         36           3
 C cysteine            1.9          8           2
 D aspartate           4.9         20           2
 E glutamate           6.3         26           2
 F phenylalanine       4.4         18           1
 G glycine             7.0         29           2
 H histidine           0.5          2           1
 I isoleucine          4.6         19           2
 K lysine              6.8         28           2
 L leucine             7.8         32           2
 M methionine          3.4         14           1
 N asparagine          3.4         14           2
 P proline             5.6         23           1
 Q glutamine           4.4         18           1
 R arginine            6.1         25           2
 S serine              7.5         31           2
 T threonine           6.1         25           2
 V valine              8.5         35           2
 W tryptophan          1.0          4           1
 Y tyrosine            1.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromodomain protein, Y chromosome-like isoform d [... 
CDYL                  1.000   chromodomain protein, Y chromosome-like isoform a [...
CDYL                  1.000   chromodomain protein, Y chromosome-like isoform d [...
CDY1                  0.628   Y chromosome chromodomain protein 1, telomeric isofo...
CDY1B                 0.628   chromodomain protein, Y-linked, 1B isoform a 
CDY2B                 0.627   Y chromosome chromodomain protein 2B 
CDY2A                 0.627   Y chromosome chromodomain protein 2A 
CDY1                  0.611   Y chromosome chromodomain protein 1, telomeric isofor...
CDY1B                 0.611   chromodomain protein, Y-linked, 1B isoform b 
CDYL2                 0.473   chromodomain protein, Y-like 2 
PECI                  0.208   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
PECI                  0.186   peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom...
ECH1                  0.080   peroxisomal enoyl-coenzyme A hydratase-like protein ...
ECHS1                 0.078   mitochondrial short-chain enoyl-coenzyme A hydratas...
ECHDC3                0.076   enoyl Coenzyme A hydratase domain containing 3 [Homo...
AUH                   0.053   AU RNA binding protein/enoyl-Coenzyme A hydratase pre...
HADHA                 0.053   mitochondrial trifunctional protein, alpha subunit p...
EHHADH                0.043   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
ECHDC1                0.041   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.041   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.035   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC2                0.023   enoyl Coenzyme A hydratase domain containing 2 [Hom...
HIBCH                 0.019   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [...
HIBCH                 0.019   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [...
SEZ6L2                0.010   seizure related 6 homolog (mouse)-like 2 isoform 4 ...
SEZ6L2                0.010   seizure related 6 homolog (mouse)-like 2 isoform 2 ...
HMGXB3                0.009   HMG box domain containing 3 
AHNAK                 0.009   AHNAK nucleoprotein isoform 1 
NINL                  0.009   ninein-like 
KLF14                 0.008   Kruppel-like factor 14 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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