Guide to the Human Genome
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Name: AUH Sequence: fasta or formatted (339aa) NCBI GI: 4502327
Description:

AU RNA binding protein/enoyl-Coenzyme A hydratase precursor

Referenced in:

Amino Acid Catabolism
RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.3         52           3
 C cysteine            1.5          5           1
 D aspartate           3.5         12           1
 E glutamate           6.5         22           3
 F phenylalanine       1.5          5           1
 G glycine            10.6         36           4
 H histidine           0.9          3           1
 I isoleucine          6.5         22           3
 K lysine              6.8         23           2
 L leucine            11.2         38           2
 M methionine          2.4          8           1
 N asparagine          2.4          8           1
 P proline             5.3         18           2
 Q glutamine           2.1          7           1
 R arginine            6.8         23           2
 S serine              5.6         19           3
 T threonine           2.4          8           1
 V valine              6.5         22           2
 W tryptophan          0.9          3           1
 Y tyrosine            1.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 
ECHDC2                0.343   enoyl Coenzyme A hydratase domain containing 2 [Hom...
ECHS1                 0.180   mitochondrial short-chain enoyl-coenzyme A hydratas...
HADHA                 0.133   mitochondrial trifunctional protein, alpha subunit p...
ECH1                  0.119   peroxisomal enoyl-coenzyme A hydratase-like protein ...
ECHDC1                0.119   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.119   enoyl Coenzyme A hydratase domain containing 1 isof...
EHHADH                0.109   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
ECHDC1                0.101   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC3                0.098   enoyl Coenzyme A hydratase domain containing 3 [Homo...
DCI                   0.085   dodecenoyl-Coenzyme A delta isomerase precursor [Hom...
HIBCH                 0.073   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [...
HIBCH                 0.073   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [...
CDYL2                 0.068   chromodomain protein, Y-like 2 
CDYL                  0.066   chromodomain protein, Y chromosome-like isoform a [...
CDYL                  0.066   chromodomain protein, Y chromosome-like isoform d [...
CDYL                  0.066   chromodomain protein, Y chromosome-like isoform d [...
CDY1                  0.063   Y chromosome chromodomain protein 1, telomeric isofor...
CDY1B                 0.063   chromodomain protein, Y-linked, 1B isoform b 
CDY2B                 0.062   Y chromosome chromodomain protein 2B 
CDY2A                 0.062   Y chromosome chromodomain protein 2A 
CDY1                  0.062   Y chromosome chromodomain protein 1, telomeric isofo...
CDY1B                 0.062   chromodomain protein, Y-linked, 1B isoform a 
PECI                  0.038   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
PECI                  0.024   peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom...
LOC100293939          0.011   PREDICTED: hypothetical protein 
LOC100291281          0.011   PREDICTED: hypothetical protein XP_002348078 
LOC100288642          0.011   PREDICTED: hypothetical protein XP_002343774 
XBP1                  0.009   X-box binding protein 1 isoform XBP1(U) 
XBP1                  0.009   X-box binding protein 1 isoform XBP1(S) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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