CDY1B 31925

Name: CDY1B	Sequence: fasta or formatted (554aa)		NCBI GI: 51538581
Description: chromodomain protein, Y-linked, 1B isoform b		Referenced in: Nonhistone Chromosomal Proteins Y-linked Genes
Other entries for this name: alt prot [540aa] chromodomain protein, Y-linked, 1B isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 42 3 C cysteine 2.0 11 2 D aspartate 5.1 28 2 E glutamate 5.6 31 2 F phenylalanine 4.2 23 1 G glycine 4.9 27 2 H histidine 1.6 9 2 I isoleucine 5.8 32 2 K lysine 8.7 48 2 L leucine 7.2 40 2 M methionine 2.5 14 2 N asparagine 5.6 31 2 P proline 4.2 23 2 Q glutamine 4.9 27 2 R arginine 5.6 31 3 S serine 7.6 42 2 T threonine 8.1 45 3 V valine 6.3 35 2 W tryptophan 1.3 7 1 Y tyrosine 1.4 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromodomain protein, Y-linked, 1B isoform b CDY1 1.000 Y chromosome chromodomain protein 1, telomeric isofor... CDY1 0.952 Y chromosome chromodomain protein 1, telomeric isofo... CDY1B 0.952 chromodomain protein, Y-linked, 1B isoform a CDY2B 0.929 Y chromosome chromodomain protein 2B CDY2A 0.929 Y chromosome chromodomain protein 2A CDYL 0.601 chromodomain protein, Y chromosome-like isoform a [... CDYL 0.446 chromodomain protein, Y chromosome-like isoform d [... CDYL 0.446 chromodomain protein, Y chromosome-like isoform d [... CDYL2 0.330 chromodomain protein, Y-like 2 PECI 0.150 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... PECI 0.126 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom... ECHS1 0.055 mitochondrial short-chain enoyl-coenzyme A hydratas... ECH1 0.052 peroxisomal enoyl-coenzyme A hydratase-like protein ... ECHDC3 0.045 enoyl Coenzyme A hydratase domain containing 3 [Homo... MPHOSPH8 0.039 M-phase phosphoprotein 8 AUH 0.037 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... EHHADH 0.030 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... HADHA 0.030 mitochondrial trifunctional protein, alpha subunit p... CBX3 0.028 chromobox homolog 3 CBX3 0.028 chromobox homolog 3 CBX5 0.028 heterochromatin protein 1-alpha CBX5 0.028 heterochromatin protein 1-alpha CBX5 0.028 heterochromatin protein 1-alpha ECHDC1 0.026 enoyl Coenzyme A hydratase domain containing 1 isof... ECHDC1 0.026 enoyl Coenzyme A hydratase domain containing 1 isof... CBX1 0.025 heterochromatin protein 1-beta CBX1 0.025 heterochromatin protein 1-beta ECHDC1 0.023 enoyl Coenzyme A hydratase domain containing 1 isof... HIBCH 0.022 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.