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Search of human proteins with 13129104
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13129104 coiled-coil domain containing 86 [Homo sapiens]
(360 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13129104 coiled-coil domain containing 86 [Homo sapiens] 728 0.0
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 67 3e-11
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 66 6e-11
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 65 1e-10
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 64 3e-10
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 62 6e-10
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 62 1e-09
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 60 2e-09
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 60 2e-09
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 60 2e-09
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 60 2e-09
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 60 3e-09
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap... 60 4e-09
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap... 60 4e-09
gi|21328446 hormone-sensitive lipase [Homo sapiens] 59 9e-09
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 58 1e-08
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 58 1e-08
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 58 2e-08
gi|110431370 espin [Homo sapiens] 57 2e-08
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 56 4e-08
gi|33356148 formin-like 1 [Homo sapiens] 56 4e-08
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 56 6e-08
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 55 7e-08
gi|54860079 nadrin isoform 1 [Homo sapiens] 55 1e-07
gi|54860105 nadrin isoform 2 [Homo sapiens] 55 1e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 55 1e-07
gi|150378539 piccolo isoform 1 [Homo sapiens] 55 1e-07
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 54 2e-07
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 54 2e-07
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 54 2e-07
>gi|13129104 coiled-coil domain containing 86 [Homo sapiens]
Length = 360
Score = 728 bits (1878), Expect = 0.0
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MDTPLRRSRRLGGLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPE 60
MDTPLRRSRRLGGLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPE
Sbjct: 1 MDTPLRRSRRLGGLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPE 60
Query: 61 RPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKP 120
RPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKP
Sbjct: 61 RPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKP 120
Query: 121 SEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLE 180
SEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLE
Sbjct: 121 SEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLE 180
Query: 181 LTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
LTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP
Sbjct: 181 LTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
Query: 241 KSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQ 300
KSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQ
Sbjct: 241 KSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQ 300
Query: 301 RRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLALLQKQPPQQPAAKI 360
RRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLALLQKQPPQQPAAKI
Sbjct: 301 RRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLALLQKQPPQQPAAKI 360
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 66.6 bits (161), Expect = 3e-11
Identities = 78/337 (23%), Positives = 143/337 (42%), Gaps = 35/337 (10%)
Query: 17 ESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPR----L 72
E L S TRRA+ SNP+ R+P R+ L P + PG+PR L
Sbjct: 299 ERENVLFLTSGTRRAVSP--SNPK-ARQPA------RSRLWLPSKSLPHLPGTPRPTSSL 349
Query: 73 QQGAGLESPQG--QPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQD 130
G+ +P P PG P +++ + +E ++ PE P+ +P AP +
Sbjct: 350 PPGSVKAAPAQVRPPSPGNIRPVKRE-VKVEPEKKDPEKEPQKVANEPSLKGRAPLVKVE 408
Query: 131 QGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPR 190
+ + E + E+ P AP + P P S AP P P+ P + P + +
Sbjct: 409 EATV-EERTPAEPEVGPAAPA--MAPAPASAPAPASAPAPAPVPT-PAMVSAPSSTVNAS 464
Query: 191 GQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRS 250
+ S E T K+R + ++ ++E K + + RV ++R+
Sbjct: 465 ASVKTSAGTTDPEEATRLLAEKRRLAREQREKEERERREQEELERQKREELAQRVAEERT 524
Query: 251 KKRFSQML----------QDKPLRTSWQRKMKERQERKLA---KDFARHLEEEKERRRQE 297
+R + +++ R + +R ++ER+E + A K+ + EE ER RQE
Sbjct: 525 TRREEESRRLEAEQAREKEEQLQRQAEERALREREEAERAQRQKEEEARVREEAERVRQE 584
Query: 298 KKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKK 334
+++ + RLE +++ E ++++ + + KK
Sbjct: 585 REKHFQREEQERLERKKRLE--EIMKRTRRTEATDKK 619
Score = 38.1 bits (87), Expect = 0.012
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 24/149 (16%)
Query: 203 ETVTGGFGAKKRKGSSSQAPASK--------KLNKEELPVIPKGKPKSGRVWKDRSKKRF 254
ET + + +K +SS+ PAS NK + P + + + R+ ++R ++R
Sbjct: 21 ETAPDSYKVQDKKNASSR-PASAISGQNNNHSGNKPDPPPVLRVDDRQ-RLARERREERE 78
Query: 255 SQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKER---RRQEKKQRRA---ENLKR 308
Q+ + + W ER+ER + + +HLEE K+R +RQ++++RRA E ++
Sbjct: 79 KQLAAREIV---WL----EREERA-RQHYEKHLEERKKRLEEQRQKEERRRAAVEEKRRQ 130
Query: 309 RLENERKAEVVQVIRNPAKLKRAKKKQLR 337
RLE +++ V R + ++ K+K R
Sbjct: 131 RLEEDKERHEAVVRRTMERSQKPKQKHNR 159
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 65.9 bits (159), Expect = 6e-11
Identities = 80/362 (22%), Positives = 144/362 (39%), Gaps = 34/362 (9%)
Query: 20 ESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLE 79
E+ + V ++ E +S PE+ + P + SPE+ SP + A +
Sbjct: 617 EAKSPVKEEAKSPAEVKS-PEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAK 675
Query: 80 SPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELA 139
SP+ P A + + +SP ++ SPE + K EEA + + + E
Sbjct: 676 SPEKAKSPVKAEAKSPEKA--KSPVKEEAKSPEKAKSPVK--EEAKSPEKAKSPVKEEAK 731
Query: 140 QNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPP 199
++ +P + + P SPE PE P E SP +
Sbjct: 732 TPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKE----EARSPADKFPEKAKS 787
Query: 200 PAGETVTGGFGAKKRKGSSSQAPASKKLNKEEL--PVIPKGKPKSGRVWKD--------- 248
P E V AK ++AP + KEE+ PV + KP+ +V +
Sbjct: 788 PVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKA 847
Query: 249 ----RSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAE 304
+++++ ++ P + + + K++E++E + K +E +KE +KK E
Sbjct: 848 PATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPE 907
Query: 305 -------NLKRRLENERKAEVVQVIRNPAKLKRAKK---KQLRSIEKRDTLALLQKQPPQ 354
+K + + K EV + + AK K K K+ + EK+DT K+P +
Sbjct: 908 KEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEE 967
Query: 355 QP 356
+P
Sbjct: 968 KP 969
Score = 51.2 bits (121), Expect = 1e-06
Identities = 68/351 (19%), Positives = 134/351 (38%), Gaps = 24/351 (6%)
Query: 14 LRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQ 73
++ +S E + V ++ + V E EET+ + + + E K G +
Sbjct: 436 IKVKSEEKIKVVEKSEKETVIVEEQTEETQV--TEEVTEEEEKEAKEEEGKEEEGGEEEE 493
Query: 74 QGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGV 133
G E + P AASP+++ +SP ++ SP + K ++P
Sbjct: 494 AEGGEEETKSPPAEEAASPEKE----AKSPVKEEAKSPAEAKSPEKEEAKSP-------- 541
Query: 134 LASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQ---QAPGPEPSQPLLELTPRAPGSPR 190
+E+ ++ +P + + PP SPE + + PE ++ + ++P +
Sbjct: 542 --AEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAK 599
Query: 191 GQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRS 250
+ P E AK +++PA K + E+ K + KS K
Sbjct: 600 SPEKAKS--PVKEEAKSPAEAKSPVKEEAKSPAEVK-SPEKAKSPTKEEAKSPEKAKSPE 656
Query: 251 KKRFSQMLQDK-PLRTSWQRKMKERQERKL-AKDFARHLEEEKERRRQEKKQRRAENLKR 308
K+ + K P++ + K + K AK + KE + +K + +
Sbjct: 657 KEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEA 716
Query: 309 RLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLALLQKQPPQQPAAK 359
+ + K+ V + + P K K K++ +S EK + + + P AK
Sbjct: 717 KSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAK 767
Score = 48.9 bits (115), Expect = 7e-06
Identities = 71/349 (20%), Positives = 140/349 (40%), Gaps = 22/349 (6%)
Query: 17 ESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGA 76
+SP + S + + E +P E + P + A + SPE+ SP + A
Sbjct: 539 KSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAK--SPAKEEAKSPA 596
Query: 77 GLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSP---ESPRCQPKPSEEAPKCSQDQGV 133
+SP+ P + + +SP ++ SP +SP P++E K +
Sbjct: 597 EAKSPEKAKSP--VKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKS 654
Query: 134 LASELAQNKEEL-TPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQ 192
E A++ E+ +P + + P SP +A PE ++ ++ ++P +
Sbjct: 655 PEKEEAKSPEKAKSPVKAEAKSPEKAKSPVK---AEAKSPEKAKSPVKEEAKSPEKAKSP 711
Query: 193 -HEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSK 251
E +K P ++ K S +K K + P K K+ V +K
Sbjct: 712 VKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPE----KAKTLDVKSPEAK 767
Query: 252 KRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLE 311
+ + + + K ++E K + L+E+ + EK+ + E +K ++
Sbjct: 768 TPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDA--KAPEKEIPKKEEVKSPVK 825
Query: 312 NERKAEVVQVIRNPAKLKRAKKKQL-RSIEKRDTLALLQKQPPQQPAAK 359
E K + V+V P K + K ++ EK+D+ +++ P++ A K
Sbjct: 826 EEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDS---KKEEAPKKEAPK 871
Score = 45.8 bits (107), Expect = 6e-05
Identities = 76/354 (21%), Positives = 136/354 (38%), Gaps = 38/354 (10%)
Query: 17 ESPESLTSVSRTRRALVEFESNPE-ETREPGSPPSVQRAGLGSPERPPKTSPG---SPRL 72
E E+ T+ E ++PE E + P + A SPE+ SP SP
Sbjct: 490 EEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEK 549
Query: 73 QQGAGLESPQGQPEPGAASPQRQQDLHLESPQ--RQPEYSPESPRCQPKPSEEAPKCSQD 130
+ E + PE A SP++++ +SP + PE + + + K EA +
Sbjct: 550 AKSPAKEEAKSPPE--AKSPEKEE---AKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKA 604
Query: 131 QGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPR 190
+ + E E +P + + P SPE ++P E ++ +P SP
Sbjct: 605 KSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEK---AKSPTKEEAK-----SPEKAKSP- 655
Query: 191 GQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRS 250
+ E +K P ++ K S +K K + PV K + KS K
Sbjct: 656 -EKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPV--KEEAKSPEKAKSPV 712
Query: 251 KKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRL 310
K+ ++ + K ++E K + ++EE + + K +A+ L +
Sbjct: 713 KEE---------AKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVK- 762
Query: 311 ENERKAEVVQVIRNPA-----KLKRAKKKQLRSIEKRDTLALLQKQPPQQPAAK 359
E K + R+PA K K K++++S EK + + P++ K
Sbjct: 763 SPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPK 816
Score = 38.9 bits (89), Expect = 0.007
Identities = 66/282 (23%), Positives = 111/282 (39%), Gaps = 41/282 (14%)
Query: 17 ESPESLTSVSRTRRA----LVEFESNP--EETREPGSPPSVQRAGLGSPER--PPKTSPG 68
+SPE+ T R+ E +P EE + P S + +PE+ P K
Sbjct: 762 KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVK 821
Query: 69 SPRLQQGAGLESPQGQP--EPGAASPQRQQDLHLESPQRQPEYSPESPRCQ-PKPSEEAP 125
SP ++ E PQ EP + + + ++ +++ E+P+ + PKP E
Sbjct: 822 SPVKEE----EKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEK 877
Query: 126 KCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRA 185
K + S++ KEE A + P P P + +P + E+ +
Sbjct: 878 KEPAVEKPKESKVEAKKEE----AEDKKKVPTPEKEAPAKVEVKEDAKPKEKT-EVAKKE 932
Query: 186 PGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRV 245
P + + EPSKP A+K+ +A KK KEE P+ KPK+
Sbjct: 933 PDDAKAK-EPSKP------------AEKK-----EAAPEKKDTKEEKAKKPEEKPKTEAK 974
Query: 246 WKDRSK---KRFSQMLQDKPLRTSWQRKMKERQERKLAKDFA 284
K+ K K S+ +K ++S + + K +D A
Sbjct: 975 AKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKA 1016
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 64.7 bits (156), Expect = 1e-10
Identities = 63/227 (27%), Positives = 85/227 (37%), Gaps = 31/227 (13%)
Query: 40 EETREPGSPPSVQRA----GLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQ 95
+++R P SPP + G P+ PP PG P+ G PQG P PG
Sbjct: 106 DKSRSPRSPPGKPQGPPPQGGNQPQGPPPP-PGKPQGPPPQGGNKPQGPPPPGKPQGPPP 164
Query: 96 QDLHLESPQRQPEYSPESPRCQ--PKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQ-- 151
Q + R P P+ P Q +P P + QG + + PG PQ
Sbjct: 165 QGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 224
Query: 152 -----------HQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPP 200
P P P P G Q GP P P+ P P+G ++P PPP
Sbjct: 225 PPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPG----KPQGP-PPQGGNKPQGPPP 279
Query: 201 AG--ETVTGGFGAKKRKGSS----SQAPASKKLNKEELPVIPKGKPK 241
G + G+K R S Q P + N+ + P P GKP+
Sbjct: 280 PGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 326
Score = 62.8 bits (151), Expect = 5e-10
Identities = 61/220 (27%), Positives = 82/220 (37%), Gaps = 32/220 (14%)
Query: 45 PGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPG---AASPQRQQDLHLE 101
PG P G P+ PP PG P+ G PQG P PG PQ +
Sbjct: 54 PGKPQGPPPQGGNQPQGPPPP-PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPR 112
Query: 102 SPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQ---------- 151
SP +P+ P P+ +P P + QG + + PG PQ
Sbjct: 113 SPPGKPQGPP--PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKS 170
Query: 152 ---HQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGG 208
P P P P G Q GP P P+ P P+G ++P PPP G+ G
Sbjct: 171 RSSRSPPGKPQGPPPQGGNQPQGPPPPPG----KPQGP-PPQGGNKPQGPPPPGKP-QGP 224
Query: 209 FGAKKRKGSSSQAPASKKL-------NKEELPVIPKGKPK 241
K S+++P K N+ + P P GKP+
Sbjct: 225 PPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 264
Score = 60.1 bits (144), Expect = 3e-09
Identities = 59/215 (27%), Positives = 76/215 (35%), Gaps = 27/215 (12%)
Query: 45 PGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQ 104
PG P G P+ PP PG P+ G PQG P PG Q +
Sbjct: 177 PGKPQGPPPQGGNQPQGPPPP-PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSA 235
Query: 105 RQPEYSPESPRCQ--PKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQ----------- 151
R P P+ P Q +P P + QG + + PG PQ
Sbjct: 236 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSR 295
Query: 152 --HQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAG--ETVTG 207
P P P P G Q GP P P+ P P+G ++P PPP G +
Sbjct: 296 SSRSPPGKPQGPPPQGGNQPQGPPPPPG----KPQGP-PPQGGNKPQGPPPPGKPQGPPP 350
Query: 208 GFGAKKRKGSS----SQAPASKKLNKEELPVIPKG 238
G+K R S Q P ++ N + P P G
Sbjct: 351 QGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAG 385
Score = 57.0 bits (136), Expect = 3e-08
Identities = 57/203 (28%), Positives = 75/203 (36%), Gaps = 41/203 (20%)
Query: 46 GSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQR 105
G+P G P+ PP + PG P+ G PQG P P PQ P
Sbjct: 34 GNPQGAPPQGGNKPQGPP-SPPGKPQGPPPQGGNQPQGPPPP-PGKPQ--------GPPP 83
Query: 106 QPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYP 165
Q P+ P KP P Q + +P +P P P P P
Sbjct: 84 QGGNKPQGPPPPGKPQGPPP--------------QGDKSRSPRSP----PGKPQGPPPQG 125
Query: 166 GQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASK 225
G Q GP P P+ P P+G ++P PPP G+ G K SS++P K
Sbjct: 126 GNQPQGPPPPPG----KPQGP-PPQGGNKPQGPPPPGKP-QGPPPQGDNKSRSSRSPPGK 179
Query: 226 KL-------NKEELPVIPKGKPK 241
N+ + P P GKP+
Sbjct: 180 PQGPPPQGGNQPQGPPPPPGKPQ 202
Score = 54.3 bits (129), Expect = 2e-07
Identities = 48/164 (29%), Positives = 61/164 (37%), Gaps = 9/164 (5%)
Query: 45 PGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQ 104
PG P G P+ PP PG P+ G PQG P PG Q
Sbjct: 239 PGKPQGPPPQGGNQPQGPPPP-PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSS 297
Query: 105 RQPEYSPESPRCQ--PKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPE 162
R P P+ P Q +P P + QG NK + P + Q PP G +
Sbjct: 298 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQG--PPPQGGNKPQGPPPPGKPQGPPPQGGSK 355
Query: 163 PYPGQQAPGPEPSQPLLE-LTPRAPGSPRGQHEPSKP--PPAGE 203
+ PG P E P+ P P G + P +P PPAG+
Sbjct: 356 SRSARSPPGKPQGPPQQEGNNPQGPPPPAGGN-PQQPQAPPAGQ 398
Score = 53.5 bits (127), Expect = 3e-07
Identities = 48/168 (28%), Positives = 60/168 (35%), Gaps = 29/168 (17%)
Query: 37 SNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQ 96
+ P+ PG P G GS R ++ PG P+ G PQG P P
Sbjct: 272 NKPQGPPPPGKPQGPPPQG-GSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPG------- 323
Query: 97 DLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQH---- 152
PQ P P+ P P + P+ QG S A++ G PQ
Sbjct: 324 -----KPQGPPPQGGNKPQGPPPPGK--PQGPPPQGGSKSRSARSPPGKPQGPPQQEGNN 376
Query: 153 -QLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPP 199
Q PP P P Q P +P P PR P R PS+PP
Sbjct: 377 PQGPPPPAGGNPQQPQAPPAGQPQGP-----PRPPQGGR----PSRPP 415
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 63.5 bits (153), Expect = 3e-10
Identities = 64/221 (28%), Positives = 86/221 (38%), Gaps = 42/221 (19%)
Query: 40 EETREPGSPPSVQRA----GLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPG---AASP 92
+++R P SPP + G P+ PP PG P+ G PQG P PG P
Sbjct: 85 DKSRSPRSPPGKPQGPPPQGGNQPQGPPPP-PGKPQGPPPQGGNRPQGPPPPGKPQGPPP 143
Query: 93 QRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQ- 151
Q + SP +P+ P P+ +P P + QG + + PG PQ
Sbjct: 144 QGDKSRSPRSPPGKPQGPP--PQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQG 201
Query: 152 ----------HQLPP-VPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPP 200
Q PP P P P G Q GP P P+ P P+G ++P PPP
Sbjct: 202 PPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPG----KPQGP-PPQGGNKPQGPPP 256
Query: 201 AGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPK 241
G+ G + GS SQ+ S P GKP+
Sbjct: 257 PGKPQ----GPPAQGGSKSQSARS-----------PPGKPQ 282
Score = 62.8 bits (151), Expect = 5e-10
Identities = 62/218 (28%), Positives = 82/218 (37%), Gaps = 32/218 (14%)
Query: 46 GSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAAS---PQRQQDLHLES 102
G+P G P+ PP PG P+ G PQG P PG PQ + S
Sbjct: 34 GNPQGPSPQGGNKPQGPPPP-PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS 92
Query: 103 PQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQ----------- 151
P +P+ P P+ +P P + QG + + PG PQ
Sbjct: 93 PPGKPQGPP--PQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRS 150
Query: 152 -HQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFG 210
P P P P G Q GP P P+ P P+G +P PPP G+ G
Sbjct: 151 PRSPPGKPQGPPPQGGNQPQGPPPPPG----KPQGP-PPQGGKKPQGPPPPGK--PQGPP 203
Query: 211 AKKRKGSSSQAPASKKL-------NKEELPVIPKGKPK 241
+ K SSQ+P K N+ + P P GKP+
Sbjct: 204 PQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 241
Score = 57.4 bits (137), Expect = 2e-08
Identities = 48/173 (27%), Positives = 67/173 (38%), Gaps = 28/173 (16%)
Query: 40 EETREPGSPPSVQRA----GLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAAS---P 92
+++R P SPP + G P+ PP PG P+ G + PQG P PG P
Sbjct: 146 DKSRSPRSPPGKPQGPPPQGGNQPQGPPPP-PGKPQGPPPQGGKKPQGPPPPGKPQGPPP 204
Query: 93 QRQQDLHLESPQRQPEYSPESPRCQPK---PSEEAPKCSQDQGVLASELAQNKEELTPGA 149
Q + +SP +P+ P QP+ P P+ QG NK + P
Sbjct: 205 QGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG-------GNKPQGPPPP 257
Query: 150 PQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAG 202
+ Q PP G + + PG P+ P G + PPPAG
Sbjct: 258 GKPQGPPAQGGSKSQSARSPPGK----------PQGPPQQEGNNPQGPPPPAG 300
Score = 50.8 bits (120), Expect = 2e-06
Identities = 57/213 (26%), Positives = 69/213 (32%), Gaps = 25/213 (11%)
Query: 58 SPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQ 117
S E P G+P+ G PQG P P PQ P Q P+ P
Sbjct: 24 SQEESPSLIAGNPQGPSPQGGNKPQGPPPP-PGKPQ--------GPPPQGGNKPQGPPPP 74
Query: 118 PKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPE---PYPGQQAPGPEP 174
KP P+ + + + G PP PG P+ P G + GP P
Sbjct: 75 GKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPP 134
Query: 175 -----SQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNK 229
P R+P SP G +P PPP G G K KK
Sbjct: 135 PGKPQGPPPQGDKSRSPRSPPG--KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQG 192
Query: 230 EELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKP 262
P P+G P G K R SQ KP
Sbjct: 193 PPPPGKPQGPPPQG------DKSRSSQSPPGKP 219
Score = 47.0 bits (110), Expect = 3e-05
Identities = 45/166 (27%), Positives = 61/166 (36%), Gaps = 22/166 (13%)
Query: 45 PGSPPSVQRAGLGSPERPP---KTSPGSPRLQQGAGLESPQGQPE---PGAASPQRQQDL 98
PG P G P+ PP K P+ + +SP G+P+ P + +
Sbjct: 176 PGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPP 235
Query: 99 HLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQH-----Q 153
PQ P P+ P P + P+ QG S+ A++ G PQ Q
Sbjct: 236 PPGKPQGPPPQGGNKPQGPPPPGK--PQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQ 293
Query: 154 LPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPP 199
PP P P Q P +P P PR P R PS+PP
Sbjct: 294 GPPPPAGGNPQQPQAPPAGQPQGP-----PRPPQGGR----PSRPP 330
Score = 39.7 bits (91), Expect = 0.004
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 37 SNPEETREPGSP--PSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQR 94
+ P+ PG P P Q R P P P Q+G +PQG P P +PQ+
Sbjct: 249 NKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEG---NNPQGPPPPAGGNPQQ 305
Query: 95 QQDLHLESPQRQPEYSPESPR 115
Q P QP+ P P+
Sbjct: 306 PQ----APPAGQPQGPPRPPQ 322
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 62.4 bits (150), Expect = 6e-10
Identities = 70/269 (26%), Positives = 111/269 (41%), Gaps = 34/269 (12%)
Query: 88 GAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLAS---ELAQNKEE 144
G R+ D SP+ PE + C P +E S+ G+L + ++
Sbjct: 189 GCGGAGRRGDSQECSPRSCPELTSGPRMC---PRKEQDSWSEAGGILFKGKVPMVVLQDI 245
Query: 145 LTPGAPQ-HQLPPVPGSPEPYPGQQA--PGPEPSQPLLELTPRAPGSPRGQHEPSKPPPA 201
L PQ LP P P + PE L + +P S P PP
Sbjct: 246 LAVRPPQIKSLPATPQGKNMTPESEVLESFPEEDSVLSHSSLSSPSSTSSPEGPPAPP-- 303
Query: 202 GETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDK 261
K+ S+S P S L + + KG + ++ R ++R + L+
Sbjct: 304 -----------KQHSSTSPFPTSTPLRRITKKFV-KGSTEKNKLRLQRDQERLGKQLK-- 349
Query: 262 PLRTSWQRKMKERQERKLAKDFARHLEEE------KERRRQEKKQRRAENLKRRLENERK 315
LR + K K ++E K AK+ A+ +EE KERR + +K + + K+RL+ ER+
Sbjct: 350 -LRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERR 408
Query: 316 AEVVQVIRNPAKLKRAK--KKQLRSIEKR 342
E + + + KR K +K+LR EKR
Sbjct: 409 KERQEALEAKLEEKRKKEEEKRLREEEKR 437
Score = 30.4 bits (67), Expect = 2.6
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 262 PLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQV 321
PLR ++ +K E+ + L+ ++ER ++ K R K +L+ E K
Sbjct: 317 PLRRITKKFVKGSTEKNKLR-----LQRDQERLGKQLKLRAEREEKEKLKEEAKR----- 366
Query: 322 IRNPAKLKRAKKKQLRSIEKRDTLALLQKQPPQQPAAK 359
+ AK K+ ++K+L+ E+R+ +K+ ++ K
Sbjct: 367 AKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLK 404
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 61.6 bits (148), Expect = 1e-09
Identities = 72/303 (23%), Positives = 116/303 (38%), Gaps = 50/303 (16%)
Query: 36 ESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQ--------GAGLESPQGQ-PE 86
E++ ++ P S P + RPP+T PG P + AG P G P+
Sbjct: 372 EADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDYPD 431
Query: 87 PGA--ASPQRQQDLHLESPQRQPEYSPE----SPRCQPKPSEEAPKCSQDQGVLASELAQ 140
G P +D QR+ + S E R + + EE + +++ +E +
Sbjct: 432 RGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKLK 491
Query: 141 NKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAP---GSPRGQHEPSK 197
+E GAP +L P +P P P P P+ P P AP +P + EP +
Sbjct: 492 RLDEKF-GAPDKRLKAEPAAPPAAP--STPAPPPAVPKELPAPPAPPPASAPTPETEPEE 548
Query: 198 P---PPAGETVT------------GGFGAKKRKGSSSQAPASKKLNKEE----------- 231
P PPA T T GG + GS +P +L +E
Sbjct: 549 PAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPP 608
Query: 232 -LPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEE 290
P +PK +PK + R SQ L + S + + +Q+ +L K +H ++
Sbjct: 609 TTPPVPKVEPKGDGIGPTRQPP--SQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQHQWQQ 666
Query: 291 KER 293
++
Sbjct: 667 HQQ 669
Score = 45.1 bits (105), Expect = 1e-04
Identities = 46/167 (27%), Positives = 66/167 (39%), Gaps = 36/167 (21%)
Query: 35 FESNPEETREPGSPPSVQRAGLGSPER-PPKTSPGSPRLQ-QGAGLESPQGQPEPGAASP 92
FE++P E + P + G PE PP T+P P+++ +G G+ + P G P
Sbjct: 584 FEASPVEPQLPS------KEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYP 637
Query: 93 QRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQH 152
+ Q+ L PR Q + E+ K Q + Q+++ P P
Sbjct: 638 KYQKSL--------------PPRFQRQQQEQLLKQQQQH-----QWQQHQQGSAPPTPVP 678
Query: 153 QLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPP 199
PP P + P QAP P P L P A G P P PP
Sbjct: 679 PSPPQPVTLGAVPAPQAPPPPPK----ALYPGALGRP-----PPMPP 716
Score = 37.7 bits (86), Expect = 0.016
Identities = 48/180 (26%), Positives = 70/180 (38%), Gaps = 11/180 (6%)
Query: 3 TPLRRSR----RLGGLR-PESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLG 57
+P RSR R GL P P S ++V R + + SNP ++ + S ++ +
Sbjct: 1435 SPKNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVI---HSNPAGIQQALAQLSSRQGSVT 1491
Query: 58 SPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQ 117
+P P+ PG P+ QG P + EP + D H E P +PR
Sbjct: 1492 APGGHPRHKPGLPQAPQGPS-PRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDS 1550
Query: 118 PKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQP 177
S PK +++ EL Q +E L P L P P P + G E P
Sbjct: 1551 AGVSPFPPK-RRERPPRKPELLQ-EESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTP 1608
Score = 37.0 bits (84), Expect = 0.027
Identities = 51/216 (23%), Positives = 78/216 (36%), Gaps = 13/216 (6%)
Query: 16 PESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQG 75
P P LTS R+A E + P PP A P P +PG P +
Sbjct: 800 PAEPRPLTSP--LRQAADEDDKGMRSETPPVPPPPPYLASY--PGFPENGAPGPPISR-- 853
Query: 76 AGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKC--SQDQGV 133
LE P +P P + P+++P + P+ + + S QG
Sbjct: 854 FPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQGP 913
Query: 134 LASELAQNKEEL---TPGAPQHQLPP-VPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSP 189
E PG+ + +PP PG+P G P P++ + EL P+
Sbjct: 914 PPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTK-VEELPPKPLEQG 972
Query: 190 RGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASK 225
+P KP P T G K+ + + +PA +
Sbjct: 973 DETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPR 1008
Score = 35.4 bits (80), Expect = 0.080
Identities = 41/188 (21%), Positives = 64/188 (34%), Gaps = 40/188 (21%)
Query: 122 EEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLEL 181
EE + S ++G A+ + + + + P G P + P P+ +
Sbjct: 344 EEDGRDSDEEG------AEGHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSR 397
Query: 182 TPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPK 241
P P P PP G G +G P ++ P P
Sbjct: 398 PPETEPGPPAPKPPLPPPHRGP--AGNWG-----------PPGDYPDRGGPPCKPPAPED 444
Query: 242 SGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQR 301
W+ R K+ S++ LA + AR EE+ERR QE+++
Sbjct: 445 EDEAWRQRRKQSSSEI--------------------SLAVERARRRREEEERRMQEERRA 484
Query: 302 R-AENLKR 308
AE LKR
Sbjct: 485 ACAEKLKR 492
Score = 32.7 bits (73), Expect = 0.52
Identities = 57/222 (25%), Positives = 85/222 (38%), Gaps = 41/222 (18%)
Query: 74 QGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGV 133
+G G P P P + E+ EY R + + SE + +
Sbjct: 1066 RGGGTGGPNHPPAPRGRTAS-------ETRSEGSEYEEIPKRRRQRGSETGSETHE---- 1114
Query: 134 LASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLE----LTPRAPGSP 189
S+LA + +E P + L VP +P P PG P P P++ TPR S
Sbjct: 1115 --SDLAPSDKE-APTPKEGTLTQVPLAPPP-PGAP-PSPAPARFTARGGRVFTPRGVPSR 1169
Query: 190 RGQHEPSKPPPAGETVTGGFGAKK----RKGSSSQAPASKKLNKEEL------PVIPKGK 239
RG+ +PPP + G K +K + P SK+ KE+L PV G
Sbjct: 1170 RGR-GGGRPPP--QVCPGWSPPAKSLAPKKPPTGPLPPSKEPLKEKLIPGPLSPVARGGS 1226
Query: 240 PKSGRVW-----KDRSKKRFSQMLQDKPLRTSWQRKMKERQE 276
V + R ++ QDKP R R++K+ +E
Sbjct: 1227 NGGSNVGMEDGERPRRRRHGRAQQQDKPPRF---RRLKQERE 1265
Score = 32.3 bits (72), Expect = 0.68
Identities = 53/217 (24%), Positives = 67/217 (30%), Gaps = 51/217 (23%)
Query: 50 SVQRAGLGSPERPPKTS--PGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQP 107
S QR G+ R P GS G G P G+ PG + S R P
Sbjct: 1386 SSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRS--RPP 1443
Query: 108 EYSPESPRCQPKPSEEAPKCSQDQGVLAS---------ELAQNKEELT---------PGA 149
E P P P + DQ + ++ +L+ + +T PG
Sbjct: 1444 EERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGL 1503
Query: 150 PQHQLPPVPGSPEPYPGQQAPGPEPSQPLLEL----------TP---------------R 184
PQ P P P Y Q+ S P E TP R
Sbjct: 1504 PQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRER 1563
Query: 185 APGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQA 221
P P E S PPP + GF K +G QA
Sbjct: 1564 PPRKPELLQEESLPPPH----SSGFLGSKPEGPGPQA 1596
Score = 31.6 bits (70), Expect = 1.2
Identities = 51/208 (24%), Positives = 66/208 (31%), Gaps = 41/208 (19%)
Query: 33 VEFESNPEETREPGSPPSVQRAGL-GSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAAS 91
V+ + + + P S S GL G+ E PPK GS L E P G P
Sbjct: 1653 VDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLN-AVPCEGPPGSEPPRRPP 1711
Query: 92 PQRQQDLHLESPQRQP------------------EYSPESPRCQPKPSEEAPKCSQDQG- 132
P E P+ QP E P P +P P + +D
Sbjct: 1712 PAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDL 1771
Query: 133 --VLASELAQNKE---ELTPGAPQHQ----LPPVPGSPEPYPGQQAPG---PEPSQPLLE 180
V+ L KE +T P + LP S EP G PEPS
Sbjct: 1772 RLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQR 1831
Query: 181 LTPRAPGSPRGQHEPSKPPPAGETVTGG 208
L P G P+ ++GG
Sbjct: 1832 LYPEVFYGSAG--------PSSSQISGG 1851
Score = 30.0 bits (66), Expect = 3.4
Identities = 42/185 (22%), Positives = 64/185 (34%), Gaps = 14/185 (7%)
Query: 20 ESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLE 79
+SL V+ RR + G+ P+V K P+ + +
Sbjct: 45 QSLGKVAIARRMPPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQ 104
Query: 80 SPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCS------QDQGV 133
P+ QP P + +P Q P+R P +PE+ P + + S D G
Sbjct: 105 PPESQPLPASQTPASNQ------PKRPPA-APENTPLVPSGVKSWAQASVTHGAHGDGGR 157
Query: 134 LASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQH 193
+S L++ E P Q + E +Q+ GP PS T G RG
Sbjct: 158 ASSLLSRFSREEFP-TLQAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPD 216
Query: 194 EPSKP 198
E P
Sbjct: 217 ELEGP 221
Score = 28.5 bits (62), Expect = 9.8
Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 10/66 (15%)
Query: 145 LTPGAP-QHQLPPVPGSPEPYP--GQQAPGPEPSQPLLELTPRAPGSPRGQHEPS---KP 198
L GAP Q L P+ S P G P P P+ P L L P P PS +P
Sbjct: 1970 LPSGAPAQQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGP----ALQPPSLAVRP 2025
Query: 199 PPAGET 204
PPA T
Sbjct: 2026 PPAPAT 2031
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 60.5 bits (145), Expect = 2e-09
Identities = 89/379 (23%), Positives = 133/379 (35%), Gaps = 73/379 (19%)
Query: 33 VEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQG--------- 83
V+ +S P P PSVQ+ P PP P P QQ P
Sbjct: 948 VKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTH 1007
Query: 84 --QPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQN 141
QP P PQ QQ H Q+ P P P+ Q +P+ + L +
Sbjct: 1008 IQQPPP----PQGQQPPHPPPGQQPPPPQPAKPQ-QVIQHHHSPRHHKSDPYSTGHLREA 1062
Query: 142 KEELTPGAPQ--------HQLPPVPGSPEPYPGQQAPGPEPSQPLL-------------- 179
L +PQ HQ PP +A QPL+
Sbjct: 1063 PSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPLVVVKEEKIHSPIIRS 1122
Query: 180 -----ELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPV 234
L P P P P P E G + AP +K++
Sbjct: 1123 EPFSPSLRPEPPKHPESIKAPVHLPQRPEMKPVDVGRPVIRPPEQNAPPPGAPDKDKQKQ 1182
Query: 235 IPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTS------------WQRKMKERQERKLA-K 281
PK + K ++ ++ ++Q P S ++R +E++ER+ A K
Sbjct: 1183 EPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFRRAAREKEEREKALK 1242
Query: 282 DFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEK 341
A H E+EKER RQE+ + R + + LE R+A + A+++Q + ++
Sbjct: 1243 AQAEHAEKEKERLRQERMRSRED--EDALEQARRAH-----------EEARRRQEQQQQQ 1289
Query: 342 RDTLALLQKQPPQQPAAKI 360
R Q+Q QQ AA +
Sbjct: 1290 RQE----QQQQQQQQAAAV 1304
Score = 41.2 bits (95), Expect = 0.001
Identities = 43/180 (23%), Positives = 68/180 (37%), Gaps = 31/180 (17%)
Query: 82 QGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQN 141
+G+ E G A P + P+ ++P+ P P + P + +L
Sbjct: 181 RGRKETGTAKPGVSTVPNTTQASTPPQ--TQTPQPNPPPVQATP---HPFPAVTPDLIVQ 235
Query: 142 KEELT--PGAPQHQLPPVPGSPEPYPGQQAPGPEPSQ---PLLELTPRAPGSPRGQ---- 192
+T P P PPVP P+P P AP P+P Q P++ TP+ + +G
Sbjct: 236 TPVMTVVPPQPLQTPPPVPPQPQPPP---APAPQPVQSHPPIIAATPQPVKTKKGVKRKA 292
Query: 193 -----------HEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPK 241
HEP PP +T G ++R+ S P K + + P+ K
Sbjct: 293 DTTTPTTIDPIHEPPSLPPEPKTTKLG---QRRESSRPVKPPKKDVPDSQQHPAPEKSSK 349
Score = 40.8 bits (94), Expect = 0.002
Identities = 46/199 (23%), Positives = 65/199 (32%), Gaps = 29/199 (14%)
Query: 16 PESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQG 75
P+ PE T + A+V SPP++ A P RP + P
Sbjct: 840 PQPPEHSTPPHLNQHAVV-------------SPPALHNALPQQPSRPSNRAAALPPKPAR 886
Query: 76 AGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLA 135
SP P P Q + +P P + ++ K +L
Sbjct: 887 PPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLP 946
Query: 136 SELAQNKEELTPGAPQH--------QLPPVPGSPEPYPGQQAPGPEPSQPLLELTP---- 183
S Q++ P H Q PP P P+P P Q P +P + L P
Sbjct: 947 SVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRP-VHLQPMQFS 1005
Query: 184 ---RAPGSPRGQHEPSKPP 199
+ P P+GQ P PP
Sbjct: 1006 THIQQPPPPQGQQPPHPPP 1024
Score = 38.1 bits (87), Expect = 0.012
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 14/161 (8%)
Query: 44 EPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESP 103
E +PP + + + SP P P P P A SP Q L P
Sbjct: 844 EHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQP 903
Query: 104 QRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEP 163
P P + + P S + +L Q + TP P ++ P P P
Sbjct: 904 ---PMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQL-QKVQPPTPLLPSVKVQSQPPPPLP 959
Query: 164 YPGQQAPGPEPS-QPLLELTPRAPGSPRGQHEPS---KPPP 200
P P PS Q L+ P P P+ Q P +PPP
Sbjct: 960 ------PPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPP 994
Score = 37.4 bits (85), Expect = 0.021
Identities = 44/200 (22%), Positives = 70/200 (35%), Gaps = 30/200 (15%)
Query: 19 PESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGL 78
P +L + R + + + P+ + S + G S E + S +
Sbjct: 661 PSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESSSESSSSDSEDSETE 720
Query: 79 ESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPES-PRCQPKPSEEAPKCSQDQGVLASE 137
+P+ + + P R+Q H +Q + +P P+ P P ++ P Q +
Sbjct: 721 MAPKSKKK---GHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQ----QQ 773
Query: 138 LAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEP-------------SQPLL----- 179
P PQ P + SP P+ Q P EP +QP+L
Sbjct: 774 QQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPGSVFDPIGHFTQPILHLPQP 833
Query: 180 ELTPRAPGSPRGQHEPSKPP 199
EL P P P E S PP
Sbjct: 834 ELPPHLPQPP----EHSTPP 849
Score = 35.0 bits (79), Expect = 0.10
Identities = 36/101 (35%), Positives = 40/101 (39%), Gaps = 9/101 (8%)
Query: 106 QPEYSPESPRCQPKPSEE--APKCSQDQGVLASELAQNKEELTPGAPQHQLP-PVPGSPE 162
+ E S ES + SE APK S+ +G E Q K Q P PVP P
Sbjct: 702 ESESSSESSSSDSEDSETEMAPK-SKKKGHPGRE--QKKHHHHHHQQMQQAPAPVPQQPP 758
Query: 163 PYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEP---SKPPP 200
P P Q P P P Q P P S Q P S PPP
Sbjct: 759 PPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPP 799
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 60.5 bits (145), Expect = 2e-09
Identities = 86/321 (26%), Positives = 119/321 (37%), Gaps = 61/321 (19%)
Query: 48 PPSVQRAGLGSPE---RPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQ 104
PP+ L +P+ PP S SP A L P P A P H P
Sbjct: 377 PPTTPIPQLPAPQAHKHPPHLSGPSP-FSMNANL------PPPPALKPLSSLSTH-HPPS 428
Query: 105 RQPEYSPESPRCQPKPSEEA--PKCSQDQGVL---ASELAQNKEELTPGAPQHQLPPVPG 159
P P+ QP PS A P +Q Q + AS ++ P P Q P VPG
Sbjct: 429 AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPG 488
Query: 160 SPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSS 219
P P P+ P P PG+ ++PP +G +GG A GSS
Sbjct: 489 GPPPIT-------PPTCPSTSTPPAGPGTS------AQPPCSGAAASGGSIAG---GSSC 532
Query: 220 QAPA----SKKLNKEELPVIPKGKPKS-----------------GRVWK--DRSKKRFSQ 256
P + L+ E P P P+S R +K DR ++
Sbjct: 533 PLPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCAR 592
Query: 257 M-LQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERK 315
L PL S K +E K ++ + EE+ER ++++K+R +R E ER+
Sbjct: 593 TDLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKER-----ERERERERE 647
Query: 316 AEVVQVIRNPAKLKRAKKKQL 336
AE + A R QL
Sbjct: 648 AERAAKASSSAHEGRLSDPQL 668
Score = 48.9 bits (115), Expect = 7e-06
Identities = 58/218 (26%), Positives = 76/218 (34%), Gaps = 39/218 (17%)
Query: 36 ESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLES-----PQGQPEPGAA 90
+S+ ++ PP++Q A G P PG+P+L S PQG P A
Sbjct: 172 DSSAQQQMLQAQPPALQ-APTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQA 230
Query: 91 SPQRQQDL------HLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEE 144
Q Q H++ P SP P PS P L Q
Sbjct: 231 PNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQP-----LTGSAGQ---- 281
Query: 145 LTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPA--G 202
P AP H PP+ G P P GP P P P G PP A G
Sbjct: 282 --PSAPSHAQPPLHGQGPPGPHSLQAGPLLQHP-------GPPQPFG-----LPPQASQG 327
Query: 203 ETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
+ G A +S Q PAS+ + + P P+ +P
Sbjct: 328 QAPLGTSPAAAYPHTSLQLPASQSALQSQQP--PREQP 363
Score = 30.4 bits (67), Expect = 2.6
Identities = 50/242 (20%), Positives = 87/242 (35%), Gaps = 32/242 (13%)
Query: 7 RSRRLGGLRPESPESLTSVSRTRRALVEFESNP--EETREPG--SPPSVQRAGLGSPERP 62
R+RR G S +L S + + A + ++P E+ R G SP + + S
Sbjct: 19 RTRRSRG----SMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAET 74
Query: 63 PKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSE 122
K S + + + L+S + Q E A+ + + + Q P SP S
Sbjct: 75 VKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESS 134
Query: 123 EAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELT 182
++ + + ++ Q+ +P P P + Q +L+
Sbjct: 135 DSRSVNDEGSSDPKDIDQDNRSTSPSIPS-----------PQDNESDSDSSAQQQMLQAQ 183
Query: 183 PRAPGSPRG-QHEPSKPPPA-------GETVTGGFGAKKRKGSSSQAPASKKLNKEELPV 234
P A +P G PS PP G T + + ++SQAP N+ + P
Sbjct: 184 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAP-----NQPQAPT 238
Query: 235 IP 236
P
Sbjct: 239 AP 240
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 60.5 bits (145), Expect = 2e-09
Identities = 86/321 (26%), Positives = 119/321 (37%), Gaps = 61/321 (19%)
Query: 48 PPSVQRAGLGSPE---RPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQ 104
PP+ L +P+ PP S SP A L P P A P H P
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHLSGPSP-FSMNANL------PPPPALKPLSSLSTH-HPPS 982
Query: 105 RQPEYSPESPRCQPKPSEEA--PKCSQDQGVL---ASELAQNKEELTPGAPQHQLPPVPG 159
P P+ QP PS A P +Q Q + AS ++ P P Q P VPG
Sbjct: 983 AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042
Query: 160 SPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSS 219
P P P+ P P PG+ ++PP +G +GG A GSS
Sbjct: 1043 GPPPIT-------PPTCPSTSTPPAGPGTS------AQPPCSGAAASGGSIAG---GSSC 1086
Query: 220 QAPA----SKKLNKEELPVIPKGKPKS-----------------GRVWK--DRSKKRFSQ 256
P + L+ E P P P+S R +K DR ++
Sbjct: 1087 PLPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCAR 1146
Query: 257 M-LQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERK 315
L PL S K +E K ++ + EE+ER ++++K+R +R E ER+
Sbjct: 1147 TDLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKER-----ERERERERE 1201
Query: 316 AEVVQVIRNPAKLKRAKKKQL 336
AE + A R QL
Sbjct: 1202 AERAAKASSSAHEGRLSDPQL 1222
Score = 48.9 bits (115), Expect = 7e-06
Identities = 58/218 (26%), Positives = 76/218 (34%), Gaps = 39/218 (17%)
Query: 36 ESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLES-----PQGQPEPGAA 90
+S+ ++ PP++Q A G P PG+P+L S PQG P A
Sbjct: 726 DSSAQQQMLQAQPPALQ-APTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQA 784
Query: 91 SPQRQQDL------HLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEE 144
Q Q H++ P SP P PS P L Q
Sbjct: 785 PNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQP-----LTGSAGQ---- 835
Query: 145 LTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPA--G 202
P AP H PP+ G P P GP P P P G PP A G
Sbjct: 836 --PSAPSHAQPPLHGQGPPGPHSLQAGPLLQHP-------GPPQPFG-----LPPQASQG 881
Query: 203 ETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
+ G A +S Q PAS+ + + P P+ +P
Sbjct: 882 QAPLGTSPAAAYPHTSLQLPASQSALQSQQP--PREQP 917
Score = 30.4 bits (67), Expect = 2.6
Identities = 50/242 (20%), Positives = 87/242 (35%), Gaps = 32/242 (13%)
Query: 7 RSRRLGGLRPESPESLTSVSRTRRALVEFESNP--EETREPG--SPPSVQRAGLGSPERP 62
R+RR G S +L S + + A + ++P E+ R G SP + + S
Sbjct: 573 RTRRSRG----SMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAET 628
Query: 63 PKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSE 122
K S + + + L+S + Q E A+ + + + Q P SP S
Sbjct: 629 VKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESS 688
Query: 123 EAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELT 182
++ + + ++ Q+ +P P P + Q +L+
Sbjct: 689 DSRSVNDEGSSDPKDIDQDNRSTSPSIPS-----------PQDNESDSDSSAQQQMLQAQ 737
Query: 183 PRAPGSPRG-QHEPSKPPPA-------GETVTGGFGAKKRKGSSSQAPASKKLNKEELPV 234
P A +P G PS PP G T + + ++SQAP N+ + P
Sbjct: 738 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAP-----NQPQAPT 792
Query: 235 IP 236
P
Sbjct: 793 AP 794
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 60.5 bits (145), Expect = 2e-09
Identities = 86/321 (26%), Positives = 119/321 (37%), Gaps = 61/321 (19%)
Query: 48 PPSVQRAGLGSPE---RPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQ 104
PP+ L +P+ PP S SP A L P P A P H P
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHLSGPSP-FSMNANL------PPPPALKPLSSLSTH-HPPS 982
Query: 105 RQPEYSPESPRCQPKPSEEA--PKCSQDQGVL---ASELAQNKEELTPGAPQHQLPPVPG 159
P P+ QP PS A P +Q Q + AS ++ P P Q P VPG
Sbjct: 983 AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042
Query: 160 SPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSS 219
P P P+ P P PG+ ++PP +G +GG A GSS
Sbjct: 1043 GPPPIT-------PPTCPSTSTPPAGPGTS------AQPPCSGAAASGGSIAG---GSSC 1086
Query: 220 QAPA----SKKLNKEELPVIPKGKPKS-----------------GRVWK--DRSKKRFSQ 256
P + L+ E P P P+S R +K DR ++
Sbjct: 1087 PLPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCAR 1146
Query: 257 M-LQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERK 315
L PL S K +E K ++ + EE+ER ++++K+R +R E ER+
Sbjct: 1147 TDLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKER-----ERERERERE 1201
Query: 316 AEVVQVIRNPAKLKRAKKKQL 336
AE + A R QL
Sbjct: 1202 AERAAKASSSAHEGRLSDPQL 1222
Score = 48.9 bits (115), Expect = 7e-06
Identities = 58/218 (26%), Positives = 76/218 (34%), Gaps = 39/218 (17%)
Query: 36 ESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLES-----PQGQPEPGAA 90
+S+ ++ PP++Q A G P PG+P+L S PQG P A
Sbjct: 726 DSSAQQQMLQAQPPALQ-APTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQA 784
Query: 91 SPQRQQDL------HLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEE 144
Q Q H++ P SP P PS P L Q
Sbjct: 785 PNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQP-----LTGSAGQ---- 835
Query: 145 LTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPA--G 202
P AP H PP+ G P P GP P P P G PP A G
Sbjct: 836 --PSAPSHAQPPLHGQGPPGPHSLQAGPLLQHP-------GPPQPFG-----LPPQASQG 881
Query: 203 ETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
+ G A +S Q PAS+ + + P P+ +P
Sbjct: 882 QAPLGTSPAAAYPHTSLQLPASQSALQSQQP--PREQP 917
Score = 30.4 bits (67), Expect = 2.6
Identities = 50/242 (20%), Positives = 87/242 (35%), Gaps = 32/242 (13%)
Query: 7 RSRRLGGLRPESPESLTSVSRTRRALVEFESNP--EETREPG--SPPSVQRAGLGSPERP 62
R+RR G S +L S + + A + ++P E+ R G SP + + S
Sbjct: 573 RTRRSRG----SMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAET 628
Query: 63 PKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSE 122
K S + + + L+S + Q E A+ + + + Q P SP S
Sbjct: 629 VKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESS 688
Query: 123 EAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELT 182
++ + + ++ Q+ +P P P + Q +L+
Sbjct: 689 DSRSVNDEGSSDPKDIDQDNRSTSPSIPS-----------PQDNESDSDSSAQQQMLQAQ 737
Query: 183 PRAPGSPRG-QHEPSKPPPA-------GETVTGGFGAKKRKGSSSQAPASKKLNKEELPV 234
P A +P G PS PP G T + + ++SQAP N+ + P
Sbjct: 738 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAP-----NQPQAPT 792
Query: 235 IP 236
P
Sbjct: 793 AP 794
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 60.1 bits (144), Expect = 3e-09
Identities = 81/349 (23%), Positives = 140/349 (40%), Gaps = 45/349 (12%)
Query: 20 ESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERP--PKTS---PGSPRLQQ 74
E S R+L + +S P R S + S RP P TS P SP
Sbjct: 425 EKEKSALARERSLKKRQSLPASPRARLSASTASELSPKSKARPSSPSTSWHRPASPCPSP 484
Query: 75 GAGLESPQGQPEPGA--ASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQG 132
G G P P P ASP+ + R+ E + ESP S P +D+
Sbjct: 485 GPGHTLPPKPPSPRGTTASPKGRV--------RRKEEAKESP------SAAGP---EDKS 527
Query: 133 VLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQ 192
+ KE P +P P P +P P +Q P P+ + +P AP P
Sbjct: 528 QSKRRASNEKESAAPASPAPSPAPSP-TPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTP 586
Query: 193 HEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKK 252
+P E T K+R+ A ++ +EE + R+ +R K+
Sbjct: 587 SKPMAGTTDREEATRLLAEKRRQ-------AREQREREE---------QERRLQAERDKR 630
Query: 253 -RFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKER--RRQEKKQRRAENLKRR 309
R Q+ ++ R + + + R+E++ A++ A+ +EE+ER +++E+ + R+ R
Sbjct: 631 MREEQLAREAEARAEREAEARRREEQE-AREKAQAEQEEQERLQKQKEEAEARSREEAER 689
Query: 310 LENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLALLQKQPPQQPAA 358
ER+ Q + + ++ ++ ++ K + QKQ ++ A
Sbjct: 690 QRLEREKHFQQQEQERQERRKRLEEIMKRTRKSEVSETKQKQDSKEANA 738
Score = 55.8 bits (133), Expect = 6e-08
Identities = 83/371 (22%), Positives = 134/371 (36%), Gaps = 73/371 (19%)
Query: 39 PEETREPGSPPSVQRAGLGSPERP-----------PKTSPGSPRLQQGAGLESP-QGQPE 86
P+ T + P R+ SP P P G R G +P + +PE
Sbjct: 349 PDRTHPSAAVPVCPRSASASPLTPCSVTRSVHRCAPAGERGERRKPNAGGSPAPVRRRPE 408
Query: 87 PGAASPQRQQDLHLESPQRQPEYS-----------PESPRCQ---PKPSEEAPKCSQDQG 132
+ ++D E+ + + + P SPR + SE +PK
Sbjct: 409 ASPVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRARLSASTASELSPKSKARPS 468
Query: 133 VLASELAQNKEELTPGAPQHQLPPVPGSP---------------EPYPGQQAPGPEPSQP 177
++ + P H LPP P SP E A GPE
Sbjct: 469 SPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRKEEAKESPSAAGPEDKSQ 528
Query: 178 LL-----ELTPRAPGSPRGQHEPSKPP-------PAGETVTGGFGAKKRKGSSSQAPASK 225
E AP SP PS P P ET T +S APA
Sbjct: 529 SKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVL-----TSPPAPA-- 581
Query: 226 KLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFAR 285
P + KP +G ++ + +++L +K + QR+ +E QER+L + +
Sbjct: 582 -------PPVTPSKPMAGTTDREEA----TRLLAEKRRQAREQREREE-QERRLQAERDK 629
Query: 286 HLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKK-QLRSIEKRDT 344
+ EE+ R E + R +RR E E + + +L++ K++ + RS E+ +
Sbjct: 630 RMREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAER 689
Query: 345 LALLQKQPPQQ 355
L +++ QQ
Sbjct: 690 QRLEREKHFQQ 700
Score = 53.1 bits (126), Expect = 4e-07
Identities = 58/239 (24%), Positives = 87/239 (36%), Gaps = 22/239 (9%)
Query: 86 EPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEEL 145
E GA +P P+ PE P P P S P D +K
Sbjct: 8 ELGAGAPPAVVARTPPEPRPSPEGDPSPP--PPPMSALVPDTPPDTPPAMKNATSSK--- 62
Query: 146 TPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPG----SPRGQHEPSKPPPA 201
QLP P SP G + P+ P E R P PR P +
Sbjct: 63 -------QLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQP 115
Query: 202 GETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDK 261
T + K +A KL KE K VW ++ +K ++ L++K
Sbjct: 116 SPTAVPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEK--AKALREK 173
Query: 262 PLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQ 320
L Q + + +E++L + R EE++R++ EK + R E +R + AE+ Q
Sbjct: 174 QL----QERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQ 228
Score = 48.5 bits (114), Expect = 9e-06
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 36/226 (15%)
Query: 142 KEELTPGAPQHQLPPVPGSPEPYP-GQQAPGPEPSQPLLELT-----------------P 183
+ EL GAP + P P P P G +P P P L+ T P
Sbjct: 6 RAELGAGAPPAVVARTPPEPRPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSSKQLP 65
Query: 184 RAPGSPRGQHEPSKPPPAGETVTGGFGAK-----------KRKGSSSQAPASKKLNKEEL 232
P SP GQ P PP E+ + ++ R S P+ + +
Sbjct: 66 LEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPASDS 125
Query: 233 PVIPKGKPKSG---RVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEE 289
P + K+G ++ K+R ++R + K + + K K +E++L ++ R LEE
Sbjct: 126 PPTKQEVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQL-QERRRRLEE 184
Query: 290 EK---ERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAK 332
++ E+RR ++R+ + L++ E A V + A++++ +
Sbjct: 185 QRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQR 230
Score = 41.2 bits (95), Expect = 0.001
Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 15/126 (11%)
Query: 36 ESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGL----ESPQGQPEPGAAS 91
E P +P PP A + P+ PP T P L ESP GQ P A
Sbjct: 24 EPRPSPEGDPSPPPPPMSALV--PDTPPDTPPAMKNATSSKQLPLEPESPSGQVGPRPAP 81
Query: 92 PQRQQDLHLESPQRQPE-YSPESPRCQPKPSEEAPKCSQDQ--GVLASELAQNKEELTPG 148
PQ ESP + + P P P+ + + SQ V AS+ K+E+
Sbjct: 82 PQE------ESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPASDSPPTKQEVKKA 135
Query: 149 APQHQL 154
+H+L
Sbjct: 136 GERHKL 141
>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
sapiens]
Length = 858
Score = 59.7 bits (143), Expect = 4e-09
Identities = 72/263 (27%), Positives = 104/263 (39%), Gaps = 66/263 (25%)
Query: 125 PKCSQDQGVLASELAQNKEELTPGAPQHQLP----PVPGSPEPYPGQQAPGPEPSQPLLE 180
PK D VL + A K+ Q QLP P P P+P P PGP P P
Sbjct: 158 PKDLDDLEVLVKQEAAGKQ-------QQQLPQTLQPQPPQPQPDPPPVPPGPTP-VPTGL 209
Query: 181 LTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
L P GS E A + + GF + +G SS + +EE P+
Sbjct: 210 LEPEPGGS-----EDCDVLEATQPLEQGFLQQLEEGPSSSGQHQPQQEEEESKPEPE--- 261
Query: 241 KSGRVW--KDRSKKRFSQMLQDK--PLRTSWQRKMK------------------------ 272
+SG W ++++K+ F ++L+DK P SW++ MK
Sbjct: 262 RSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAY 321
Query: 273 -------ERQERKL----AKDFARHLEEEKERRRQEKKQRRAENLKRRL-------ENER 314
E++E +L AK +H E+ ER + RRAE L E +R
Sbjct: 322 KAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDR 381
Query: 315 KAEVVQVIRNPAKLKRAKKKQLR 337
K V+ AK ++ + KQLR
Sbjct: 382 KEVYDDVLFFLAKKEKEQAKQLR 404
>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
sapiens]
Length = 871
Score = 59.7 bits (143), Expect = 4e-09
Identities = 72/263 (27%), Positives = 104/263 (39%), Gaps = 66/263 (25%)
Query: 125 PKCSQDQGVLASELAQNKEELTPGAPQHQLP----PVPGSPEPYPGQQAPGPEPSQPLLE 180
PK D VL + A K+ Q QLP P P P+P P PGP P P
Sbjct: 164 PKDLDDLEVLVKQEAAGKQ-------QQQLPQTLQPQPPQPQPDPPPVPPGPTP-VPTGL 215
Query: 181 LTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
L P GS E A + + GF + +G SS + +EE P+
Sbjct: 216 LEPEPGGS-----EDCDVLEATQPLEQGFLQQLEEGPSSSGQHQPQQEEEESKPEPE--- 267
Query: 241 KSGRVW--KDRSKKRFSQMLQDK--PLRTSWQRKMK------------------------ 272
+SG W ++++K+ F ++L+DK P SW++ MK
Sbjct: 268 RSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAY 327
Query: 273 -------ERQERKL----AKDFARHLEEEKERRRQEKKQRRAENLKRRL-------ENER 314
E++E +L AK +H E+ ER + RRAE L E +R
Sbjct: 328 KAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDR 387
Query: 315 KAEVVQVIRNPAKLKRAKKKQLR 337
K V+ AK ++ + KQLR
Sbjct: 388 KEVYDDVLFFLAKKEKEQAKQLR 410
>gi|21328446 hormone-sensitive lipase [Homo sapiens]
Length = 1076
Score = 58.5 bits (140), Expect = 9e-09
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 18/222 (8%)
Query: 39 PEETREPGSP--PSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGA---ASPQ 93
PE + P +P P ++ + PE KT GS Q+ A + P Q E A A Q
Sbjct: 15 PEPHQRPITPLEPGPEKTPIAQPES--KTLQGSNTQQKPASNQRPLTQQETPAQHDAESQ 72
Query: 94 RQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAP--- 150
++ +S ++ +P+ P Q P + +Q + KE +T P
Sbjct: 73 KEPRAQQKSASQEEFLAPQKPAPQQSPYIQRVLLTQQEAASQQGPGLGKESITQQEPALR 132
Query: 151 -QHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGF 209
+H P PG EP P QQ P+ R P +P P + + T
Sbjct: 133 QRHVAQPGPGPGEPPPAQQEAESTPAAQAKPGAKREPSAPTESTSQETPEQSDKQTTPVQ 192
Query: 210 GAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSK 251
GAK ++GS ++ KL +EL + +S WK S+
Sbjct: 193 GAKSKQGSLTELGFLTKL--QELSI-----QRSALEWKALSE 227
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 58.2 bits (139), Expect = 1e-08
Identities = 61/215 (28%), Positives = 76/215 (35%), Gaps = 32/215 (14%)
Query: 39 PEETREPGSPPSVQRAGLGSPERPPKTSP---GSPRLQQGAGLESPQGQPEP-----GAA 90
P + GS P + S RP ++SP GSP + G SP P P G A
Sbjct: 170 PPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTA 229
Query: 91 ---SPQRQQDLHLESP-QRQPEYSPESPRC-QPKPSEEAPKCSQDQGVLASELAQNKEEL 145
RQ L SP +P P R KP P + ++E +
Sbjct: 230 LGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSI-------HREAV 282
Query: 146 TPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETV 205
P PQ+ PPVP +P P QAP P P P PG P P P +G
Sbjct: 283 PPPPPQNNKPPVPSTPRPSASSQAPPPPP-------PPSRPGPP-----PLPPSSSGNDE 330
Query: 206 TGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
T + SSS P LP P +P
Sbjct: 331 TPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERP 365
Score = 52.8 bits (125), Expect = 5e-07
Identities = 63/245 (25%), Positives = 83/245 (33%), Gaps = 45/245 (18%)
Query: 37 SNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQ 96
S+P R P PP+ RA P PP P + + A P +P S R
Sbjct: 243 SSPFSNRPP-LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPR-- 299
Query: 97 DLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPP 156
P S ++P P PS P L + N E TP PQ L
Sbjct: 300 ----------PSASSQAPPPPPPPSRPGPP------PLPPSSSGNDE--TPRLPQRNLSL 341
Query: 157 VPGSPE-PYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRK 215
+P P PG+ P P P E P P G+ P PPP R
Sbjct: 342 SSSTPPLPSPGRSGPLPPPPS---ERPPPPVRDPPGRSGPLPPPP----------PVSRN 388
Query: 216 GSSSQA-PASKKLNKEE---------LPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRT 265
GS+S+A PA+ +L P +P +P +G QD P
Sbjct: 389 GSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCED 448
Query: 266 SWQRK 270
W+ +
Sbjct: 449 EWESR 453
Score = 32.3 bits (72), Expect = 0.68
Identities = 36/159 (22%), Positives = 57/159 (35%), Gaps = 8/159 (5%)
Query: 47 SPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQ 106
S P + G P PP + P ++ G P P P + + + L +PQ
Sbjct: 344 STPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALP-ATPQLP 402
Query: 107 PEYSPESPRCQPKP--SEEAPKCSQDQGVLASELAQNKEELTPGAPQHQ----LPPVPGS 160
+SPR P+P + P S +N + +P + + P+
Sbjct: 403 SRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDL 462
Query: 161 PEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPP 199
P P P Q PS+ L R+ + R + P PP
Sbjct: 463 PPPEPYVQTTKSYPSK-LARNESRSGSNRRERGAPPLPP 500
Score = 30.0 bits (66), Expect = 3.4
Identities = 35/145 (24%), Positives = 49/145 (33%), Gaps = 24/145 (16%)
Query: 36 ESNPEETREPGS-------PPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEP- 87
E P R+P PP V R G S + P +P+L +G++SP+ P P
Sbjct: 363 ERPPPPVRDPPGRSGPLPPPPPVSRNGSTS-----RALPATPQLPSRSGVDSPRSGPRPP 417
Query: 88 --------GAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCS---QDQGVLAS 136
GA P Q P R P + P Q S
Sbjct: 418 LPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPS 477
Query: 137 ELAQNKEELTPGAPQHQLPPVPGSP 161
+LA+N+ + PP+P P
Sbjct: 478 KLARNESRSGSNRRERGAPPLPPIP 502
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 58.2 bits (139), Expect = 1e-08
Identities = 61/215 (28%), Positives = 76/215 (35%), Gaps = 32/215 (14%)
Query: 39 PEETREPGSPPSVQRAGLGSPERPPKTSP---GSPRLQQGAGLESPQGQPEP-----GAA 90
P + GS P + S RP ++SP GSP + G SP P P G A
Sbjct: 170 PPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTA 229
Query: 91 ---SPQRQQDLHLESP-QRQPEYSPESPRC-QPKPSEEAPKCSQDQGVLASELAQNKEEL 145
RQ L SP +P P R KP P + ++E +
Sbjct: 230 LGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSI-------HREAV 282
Query: 146 TPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETV 205
P PQ+ PPVP +P P QAP P P P PG P P P +G
Sbjct: 283 PPPPPQNNKPPVPSTPRPSASSQAPPPPP-------PPSRPGPP-----PLPPSSSGNDE 330
Query: 206 TGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
T + SSS P LP P +P
Sbjct: 331 TPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERP 365
Score = 52.8 bits (125), Expect = 5e-07
Identities = 63/245 (25%), Positives = 83/245 (33%), Gaps = 45/245 (18%)
Query: 37 SNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQ 96
S+P R P PP+ RA P PP P + + A P +P S R
Sbjct: 243 SSPFSNRPP-LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPR-- 299
Query: 97 DLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPP 156
P S ++P P PS P L + N E TP PQ L
Sbjct: 300 ----------PSASSQAPPPPPPPSRPGPP------PLPPSSSGNDE--TPRLPQRNLSL 341
Query: 157 VPGSPE-PYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRK 215
+P P PG+ P P P E P P G+ P PPP R
Sbjct: 342 SSSTPPLPSPGRSGPLPPPPS---ERPPPPVRDPPGRSGPLPPPP----------PVSRN 388
Query: 216 GSSSQA-PASKKLNKEE---------LPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRT 265
GS+S+A PA+ +L P +P +P +G QD P
Sbjct: 389 GSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCED 448
Query: 266 SWQRK 270
W+ +
Sbjct: 449 EWESR 453
Score = 32.3 bits (72), Expect = 0.68
Identities = 36/159 (22%), Positives = 57/159 (35%), Gaps = 8/159 (5%)
Query: 47 SPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQ 106
S P + G P PP + P ++ G P P P + + + L +PQ
Sbjct: 344 STPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALP-ATPQLP 402
Query: 107 PEYSPESPRCQPKP--SEEAPKCSQDQGVLASELAQNKEELTPGAPQHQ----LPPVPGS 160
+SPR P+P + P S +N + +P + + P+
Sbjct: 403 SRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDL 462
Query: 161 PEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPP 199
P P P Q PS+ L R+ + R + P PP
Sbjct: 463 PPPEPYVQTTKSYPSK-LARNESRSGSNRRERGAPPLPP 500
Score = 30.0 bits (66), Expect = 3.4
Identities = 35/145 (24%), Positives = 49/145 (33%), Gaps = 24/145 (16%)
Query: 36 ESNPEETREPGS-------PPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEP- 87
E P R+P PP V R G S + P +P+L +G++SP+ P P
Sbjct: 363 ERPPPPVRDPPGRSGPLPPPPPVSRNGSTS-----RALPATPQLPSRSGVDSPRSGPRPP 417
Query: 88 --------GAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCS---QDQGVLAS 136
GA P Q P R P + P Q S
Sbjct: 418 LPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPS 477
Query: 137 ELAQNKEELTPGAPQHQLPPVPGSP 161
+LA+N+ + PP+P P
Sbjct: 478 KLARNESRSGSNRRERGAPPLPPIP 502
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 57.8 bits (138), Expect = 2e-08
Identities = 75/274 (27%), Positives = 101/274 (36%), Gaps = 61/274 (22%)
Query: 22 LTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPER-----PPKTSPGSPR----- 71
L VSR E +P P SPP PE PP+ SP SP
Sbjct: 656 LPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSL 715
Query: 72 ----LQQGAGLESPQGQPE--PGAASPQ---RQQDLHLESPQRQPEYSP--ESPRCQPKP 120
L++ L P+ +P+ P + P R ++ HL +P SP E P P+P
Sbjct: 716 MSLPLEESPLLPLPE-EPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQP 774
Query: 121 SE-------EAPKCS-QDQGVLASELAQNKEE--LTPGAPQHQLPPVPGSP--EPYPGQQ 168
E E P S Q +G L+ EE L+P + L PVP P P P +
Sbjct: 775 EEPCLCAVPEEPHLSPQAEG---PHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEES 831
Query: 169 APGPEPSQPLLELTP----------RAPGSPRGQHEPSKP------------PPAGETVT 206
P+ +P L P + P SPR + P +P PP GE
Sbjct: 832 HLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSL 891
Query: 207 GGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
+ + P S EELP+ P G+P
Sbjct: 892 SPLLGEPALSEPGEPPLSPL--PEELPLSPSGEP 923
Score = 48.5 bits (114), Expect = 9e-06
Identities = 57/181 (31%), Positives = 70/181 (38%), Gaps = 22/181 (12%)
Query: 39 PEETREPGSPPSVQRAGLGSPER-----PPKTSPGSP---RLQQGAGLE----SPQGQPE 86
PEE+ P SPP + PE PP+ P SP L LE SP +
Sbjct: 444 PEES--PLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEES 501
Query: 87 PGAASPQRQQDLHLE-SPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEEL 145
P + P+ LE SP PE SP SP + S S L+ EEL
Sbjct: 502 PLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEEL 561
Query: 146 T----PGAPQHQLPPV--PGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPP 199
P A + PP P SP P +P PE S+ L +P SP + P PP
Sbjct: 562 PTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASR-LFPPFEESPLSPPPEESPLSPP 620
Query: 200 P 200
P
Sbjct: 621 P 621
Score = 47.8 bits (112), Expect = 2e-05
Identities = 52/189 (27%), Positives = 68/189 (35%), Gaps = 36/189 (19%)
Query: 44 EPGSPPSVQRAGLGSPERPPKTSPGSPRLQ-QGAGLESPQGQPEPGAASPQRQQDLHLES 102
+P P V ++G G P + G R Q QG ++PQ + SPQ+QQ L
Sbjct: 4171 QPPKPGPVLQSGQGLPGVGIMPTVGQLRAQLQGVLAKNPQLRH----LSPQQQQQLQALL 4226
Query: 103 PQRQPEYSP--------ESPRCQPKPSEEAPKCSQDQGVLASELAQNKEEL--------- 145
QRQ + S + P Q P + C G +EL
Sbjct: 4227 MQRQLQQSQAVRQTPPYQEPGTQTSPLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGP 4286
Query: 146 -----TPGA--------PQHQLPPVPGSPEPYPGQQAPGPEPSQPL-LELTPRAPGSPRG 191
PGA P H PP EP Q P P P +L P PG+P+
Sbjct: 4287 PRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKP 4346
Query: 192 QHEPSKPPP 200
Q +PPP
Sbjct: 4347 QGPTLEPPP 4355
Score = 46.6 bits (109), Expect = 3e-05
Identities = 54/207 (26%), Positives = 77/207 (37%), Gaps = 37/207 (17%)
Query: 62 PPKTSPGSPRLQQGAGLESPQGQ-----PEPGAASPQRQQDLHLESPQRQPEYSPESPRC 116
PP+ SP SP ++ P+ PE ASP + LHL P E SP SP
Sbjct: 443 PPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEA-LHLSRPL---EESPLSP-- 496
Query: 117 QPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQ 176
P EE+P L+P P+ SP P + P P
Sbjct: 497 ---PPEESP-------------------LSPPPESSPFSPLEESPLSPPEESPPSPALET 534
Query: 177 PLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIP 236
PL +P SP + P PPP + A + ++P S EE P+ P
Sbjct: 535 PLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPP--PEESPMSP 592
Query: 237 KGKPKSGRVWKDRSKKRFSQMLQDKPL 263
P++ R++ + S ++ PL
Sbjct: 593 --PPEASRLFPPFEESPLSPPPEESPL 617
Score = 41.2 bits (95), Expect = 0.001
Identities = 44/167 (26%), Positives = 59/167 (35%), Gaps = 13/167 (7%)
Query: 37 SNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQ 96
S P E PP E P P RL + PE SP +
Sbjct: 618 SPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPE- 676
Query: 97 DLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPP 156
ESP P PE+ R P P E++P + AS ++ P + L P
Sbjct: 677 ----ESPTSPP---PEASRLSP-PPEDSPTSPPPEDSPASPPPEDSLMSLP-LEESPLLP 727
Query: 157 VPGSPEPYPGQQAP--GPEPSQPLLELTPRAPG-SPRGQHEPSKPPP 200
+P P+ P + P P P +P L P P SP+ + P P
Sbjct: 728 LPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQP 774
Score = 40.0 bits (92), Expect = 0.003
Identities = 53/191 (27%), Positives = 68/191 (35%), Gaps = 47/191 (24%)
Query: 16 PESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSP------ERPPKTSPGS 69
P SP SR E +P P SPP + + L P PP+ SP S
Sbjct: 562 PTSPPP--EASRLSPPPEESPMSPPPEESPMSPPP-EASRLFPPFEESPLSPPPEESPLS 618
Query: 70 PRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQ 129
P + A SP + P + P+ ESP P PE R P P
Sbjct: 619 PPPE--ASRLSPPPEDSPMSPPPE-------ESPMSPP---PEVSRLSPLP--------- 657
Query: 130 DQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSP 189
+ S L+ EE P + P SP P + +P PE S P SP
Sbjct: 658 ----VVSRLSPPPEESPLSPPPEESPT---SPPPEASRLSPPPEDS----------PTSP 700
Query: 190 RGQHEPSKPPP 200
+ P+ PPP
Sbjct: 701 PPEDSPASPPP 711
Score = 39.3 bits (90), Expect = 0.006
Identities = 64/248 (25%), Positives = 84/248 (33%), Gaps = 66/248 (26%)
Query: 11 LGGLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSP 70
LGGL ++P+ + R + VE +S P P PP Q P P PGS
Sbjct: 2316 LGGLELKTPDVFKAPLTPRASQVEPQS-PGLGLRPQEPPPAQALAPSPPSHPDIFRPGS- 2373
Query: 71 RLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQD 130
P QP P +PR QP P E C+
Sbjct: 2374 -------YTDPYAQP-------------------------PLTPRPQPPPPESC--CALP 2399
Query: 131 QGVLASELAQNKEELTPGAPQHQ------LPPVPGSPEPY------PGQQAPGPEPSQPL 178
L S+ P +PQ Q L P P S E + P Q+P P S+P
Sbjct: 2400 PRSLPSDPFSR----VPASPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPY-SRPP 2454
Query: 179 LELTPRAPGSPRGQHEPSKPPP------AGETVTGGFGAKKRKGSSSQAPASKKLNKEEL 232
R P +P H+P +P P AG GA + PA + K
Sbjct: 2455 SRPQSRDPFAP--LHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAALPAGPAGELHAK--- 2509
Query: 233 PVIPKGKP 240
+P G+P
Sbjct: 2510 --VPSGQP 2515
Score = 37.4 bits (85), Expect = 0.021
Identities = 48/173 (27%), Positives = 61/173 (35%), Gaps = 56/173 (32%)
Query: 48 PPSVQRAGLGSPERPPKTSP----GSPRLQQGAGLESPQGQPEPGAAS---PQRQQDLHL 100
PP Q LGSP PP +P GSP G S G +P A S P +L L
Sbjct: 2107 PP--QPGALGSP--PPAAAPTIFIGSPTTPAGLST-SADGFLKPPAGSVPGPDSPGELFL 2161
Query: 101 ESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGS 160
+ P + P P +Q+ L P P P P +
Sbjct: 2162 KLPPQVPAQVP---------------------------SQDPFGLAPAYPLE--PRFPTA 2192
Query: 161 PEPYPGQQAPGPEPSQPLL-------------ELTPRAPGSPRGQHEPSKPPP 200
P YP +P P+QP + E PG+PR H+PS P P
Sbjct: 2193 PPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPR--HQPSTPDP 2243
Score = 36.2 bits (82), Expect = 0.047
Identities = 45/197 (22%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 77 GLESPQGQPEPG-----AASPQRQQDLHLESPQRQP----EYSPESPR-------CQPKP 120
G+++P QPEPG AS + + L+ + P E PE + C+ +
Sbjct: 1127 GIDAPGSQPEPGQTPGSLASELKGSPVLLDPEELAPVTPMEVYPECKQTAGQGSPCEEQE 1186
Query: 121 SEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLP---PVPGSPEPYPGQQAPGPEPSQP 177
AP ++ S++ L+ G P P+ GSP+P G S
Sbjct: 1187 EPRAPVAPTPPTLIKSDIVNEISNLSQGDASASFPGSEPLLGSPDPEGGGSL-----SME 1241
Query: 178 LLELTPRAPGSPRG----------QHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKL 227
L T +P G + + S AG ++GG A+ KG +PA ++
Sbjct: 1242 LGVSTDVSPARDEGSLRLCTDSLPETDDSLLCDAGTAISGG-KAEGEKGRRRSSPARSRI 1300
Query: 228 NKEELPVIP-KGKPKSG 243
+ P + +P+ G
Sbjct: 1301 KQGRSSSFPGRRRPRGG 1317
Score = 35.8 bits (81), Expect = 0.061
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 37 SNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAA 90
S+P+E + P PS + L + + P T PG+P+ QG LE P G+ P AA
Sbjct: 4312 SSPQEPKRPSQLPSPS-SQLPTEAQLPPTHPGTPK-PQGPTLEPPPGRVSPAAA 4363
Score = 34.7 bits (78), Expect = 0.14
Identities = 40/158 (25%), Positives = 50/158 (31%), Gaps = 21/158 (13%)
Query: 45 PGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQ 104
PGS PS R P P + + R G Q P PG+ Q+QQ + Q
Sbjct: 2763 PGSFPSDDRLSRPPPPATPSSMDVNSRQLVGGSQAFYQRAPYPGSLPLQQQQQQLWQQQQ 2822
Query: 105 RQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPY 164
S PS P+ + L S LA L P
Sbjct: 2823 ATAATSMRFAMSARFPSTPGPELGRQ--ALGSPLAGISTRL-----------------PG 2863
Query: 165 PGQQAPGPEPSQPLLELTPRAPG--SPRGQHEPSKPPP 200
PG+ PGP +EL P G P + PP
Sbjct: 2864 PGEPVPGPAGPAQFIELRHNVQKGLGPGGTPFPGQGPP 2901
Score = 32.7 bits (73), Expect = 0.52
Identities = 43/156 (27%), Positives = 57/156 (36%), Gaps = 20/156 (12%)
Query: 63 PKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSE 122
P T G P L G ES EPG P D L Q QP+ P S + QP P
Sbjct: 4041 PSTHQGGP-LAIGTTPESMA--TEPGEVKPSLSGDSQLLLVQPQPQPQPSSLQLQP-PLR 4096
Query: 123 EAPKCSQDQGVLASELAQNKEELTPGAPQH--QLPPVPGSPEPYPGQQAPGP------EP 174
+ Q +L + + +L G+ +P + P G Q PG P
Sbjct: 4097 LPGQQQQQVSLLHTAGGGSHGQLGSGSSSEASSVPHLLAQPSVSLGDQ-PGSMTQNLLGP 4155
Query: 175 SQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFG 210
QP+LE P + +PP G + G G
Sbjct: 4156 QQPMLE-------RPMQNNTGPQPPKPGPVLQSGQG 4184
Score = 31.6 bits (70), Expect = 1.2
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 155 PPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKK- 213
PP SP P P +P P++PL+EL P P + P P + +
Sbjct: 4910 PPEEPSPPPSPLAPSPASPPTEPLVEL----PTEPLAEPPVPSPLPLASSPESARPKPRA 4965
Query: 214 ---RKGSSSQAPASKK---LNKEELPVIPKGKPKSGRVWKDRSKKRFSQML 258
+G S+ P KK + + L ++ + SGR +R F + L
Sbjct: 4966 RPPEEGEDSRPPRLKKWKGVRWKRLRLLLTIQKGSGRQEDEREVAEFMEQL 5016
Score = 29.6 bits (65), Expect = 4.4
Identities = 67/291 (23%), Positives = 107/291 (36%), Gaps = 48/291 (16%)
Query: 55 GLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESP 114
GLG+P+ K GS R + S +G P A ++ LE P
Sbjct: 1800 GLGTPKA--KGDGGSERKELPT---SQKGDDGPDIAD---EESRGLEGKADTPGPEDGGV 1851
Query: 115 RCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAP----QHQLPPVPGSP-EPYPGQQA 169
+ P PS+ + +G+L+S+L + E P Q V GS E + G
Sbjct: 1852 KASPVPSDPEKPGTPGEGMLSSDLDRISTEELPKMESKDLQQLFKDVLGSEREQHLGCGT 1911
Query: 170 PGPEPSQPLLELTPRAPGSPRGQHEPSKPPPA--GETVTGGFGAKKRKGSSSQAPASKKL 227
PG E S+ L+ G P G S P + G + +++R G S P
Sbjct: 1912 PGLEGSRTPLQRPFLQGGLPLGNLPSSSPMDSYPGLCQSPFLDSRERGGFFSPEPGEPDS 1971
Query: 228 -------NKEELPVIPKGKPK-SGRVWKDRSKKR----------------------FSQM 257
P P + + G + RS +R F +
Sbjct: 1972 PWTGSGGTTPSTPTTPTTEGEGDGLSYNQRSLQRWEKDEELGQLSTISPVLYANINFPNL 2031
Query: 258 LQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERR---RQEKKQRRAEN 305
QD P +S +++ + + A D A +L++ K+ R R K Q++AE+
Sbjct: 2032 KQDYPDWSSRCKQIMKLWRKVPAADKAPYLQKAKDNRAAHRINKVQKQAES 2082
Score = 29.6 bits (65), Expect = 4.4
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 16/207 (7%)
Query: 21 SLTSVSRTRRALVEFESNPEETREP-GSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLE 79
S+ +S +++L+ P+ + +P GS +Q+ ++ + +LQQ L+
Sbjct: 3869 SMAGLSHLQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQ-QQQLQQQQQLQ 3927
Query: 80 SPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELA 139
Q Q Q+QQ L+ Q+Q + Q + ++ Q Q L
Sbjct: 3928 QQQLQ--------QQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLN 3979
Query: 140 QNKEELTPGAPQHQLPPV-PGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKP 198
Q++ L+P Q Q + PG P P Q P P L LT G + +P+
Sbjct: 3980 QSRTLLSPQQQQQQQVALGPGMPAK-PLQHFSSPGALGPTLLLT----GKEQNTVDPAVS 4034
Query: 199 PPAGETVTGGFGAKKRKGSSSQAPASK 225
A E + G G++ ++ A++
Sbjct: 4035 SEATEGPSTHQGGPLAIGTTPESMATE 4061
Score = 29.3 bits (64), Expect = 5.7
Identities = 48/165 (29%), Positives = 58/165 (35%), Gaps = 49/165 (29%)
Query: 43 REPGSP-PSVQRAGLGSPERPPKT---SPGSP---------------RLQQGAGLESPQG 83
R P +P P + R LGSP T PG P +Q+G G P G
Sbjct: 2836 RFPSTPGPELGRQALGSPLAGISTRLPGPGEPVPGPAGPAQFIELRHNVQKGLG---PGG 2892
Query: 84 QPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKE 143
P PG PQR P + P S P AP+ +G+ S L K
Sbjct: 2893 TPFPGQGPPQR------------PRFYPVS----EDPHRLAPEGL--RGLAVSGLPPQK- 2933
Query: 144 ELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGS 188
P AP P + S P P + P LEL R P S
Sbjct: 2934 ---PSAP--PAPELNNSLHPTPHTKGPTLPTG---LELVNRPPSS 2970
>gi|110431370 espin [Homo sapiens]
Length = 854
Score = 57.4 bits (137), Expect = 2e-08
Identities = 91/336 (27%), Positives = 129/336 (38%), Gaps = 59/336 (17%)
Query: 26 SRTRRALVEFESNPEETREPGSPPS---VQRAGLGSPERPPKTSP---GSPRLQQGA--G 77
SR RA + S + R+ G P R G+ E P G PRL A
Sbjct: 504 SRKPRAFSKQPSTGDYYRQLGRCPGETLAARPGMAHSEEVRARQPARAGCPRLGPAARGS 563
Query: 78 LESPQGQPE----PG-------AASPQRQQDLHLESPQRQP---EYSPESPRCQPKPSEE 123
LE P P+ PG AA P+ ++L P P E + P P P E
Sbjct: 564 LEGPSAPPQAALLPGNHVPNGCAADPKASRELPPPPPPPPPPLPEAASSPPPAPPLPLES 623
Query: 124 A-PKCSQDQGV----------LASELAQNKEELTPGAPQHQLPPVP---GSPEPYPGQQA 169
A P C Q + + S N E L L P P G + G
Sbjct: 624 AGPGCGQRRSSSSTGSTKSFNMMSPTGDNSELLAEIKAGKSLKPTPQSKGLTTVFSGIGQ 683
Query: 170 PGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNK 229
P +P PL ++P SP S PPA GF GS P +
Sbjct: 684 PAFQPDSPLPSVSPAL--SP----VRSPTPPAA-----GF-QPLLNGSLVPVPPTTPAPG 731
Query: 230 EELPV---IPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLA------ 280
+L V IP + GR + ++ + +Q K QR+ +E +E +LA
Sbjct: 732 VQLDVEALIPT-HDEQGRPIPEWKRQVMVRKMQLKMQEEEEQRRKEEEEEARLASMPAWR 790
Query: 281 KDFARH-LEEEKERRRQEKKQRRAENLKRRLENERK 315
+D R LEEE+E++R+E+++++ E L+R E K
Sbjct: 791 RDLLRKKLEEEREQKRKEEERQKQEELRREKEQSEK 826
Score = 30.8 bits (68), Expect = 2.0
Identities = 37/162 (22%), Positives = 54/162 (33%), Gaps = 18/162 (11%)
Query: 72 LQQGAGLESPQGQPEPGAASPQ-----RQQDLHLESPQRQPEYSPESPRCQPKPSEEAPK 126
L + E QP+ G +SP + + L SP + P
Sbjct: 337 LSRDPSAELEAKQPDSGMSSPNTTVSVQPLNFDLSSPTSTLSNYDSCSSSHSSIKGQHPP 396
Query: 127 CSQDQGVLASELAQNKEELTP--GAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPR 184
C A+++ + L P G P+ + G P P P + P P P +L P
Sbjct: 397 CGLSSA-RAADIQSYMDMLNPELGLPRGTI----GKPTPPPPPPSFPPPPPPPGTQLPPP 451
Query: 185 APGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKK 226
PG P+ PP G + K K + A KK
Sbjct: 452 PPG------YPAPKPPVGPQAADIYMQTKNKLRHVETEALKK 487
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 56.2 bits (134), Expect = 4e-08
Identities = 72/301 (23%), Positives = 114/301 (37%), Gaps = 63/301 (20%)
Query: 45 PGSP--PSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQP----------------- 85
PG P P+ + L P PP P P+ QQ PQ QP
Sbjct: 565 PGQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQ 624
Query: 86 EPGAASPQRQQDLHLES---------PQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLAS 136
P PQ Q H P QP++ P QP+ S +C Q QG+ +
Sbjct: 625 HPPQHPPQHQHHHHHHHLSVPPPPLMPMSQPQFRPHVQTAQPQASSSRMQCPQRQGLRHN 684
Query: 137 ELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEP- 195
+QN + P Q+ P +P ++ P PS + + R +P Q +P
Sbjct: 685 TTSQNVSK----RPMQQMQPT--APRNSNLRELP-IAPSHVIEMSSSRCSATPSAQVKPI 737
Query: 196 -SKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRF 254
S PP+ V G SSQ K+ P P +P K+ +K
Sbjct: 738 VSASPPS-RAVAG--------SRSSQGKTEVKVK----PASPVAQP------KEEAKTET 778
Query: 255 SQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENER 314
+D+ R ++K ++++L ++ + +KE RRQ++ R + L RL ++
Sbjct: 779 EFPDEDEETRL---YRLKIEEQKRLREEILK----QKELRRQQQAGARKKELLERLAQQQ 831
Query: 315 K 315
+
Sbjct: 832 Q 832
Score = 42.7 bits (99), Expect = 5e-04
Identities = 60/254 (23%), Positives = 86/254 (33%), Gaps = 34/254 (13%)
Query: 9 RRLGGLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERP------ 62
R +G R ES E + R AL+ + P PP Q+ + S +P
Sbjct: 286 RGVGDQRRESTER-GRMKDHRPALLPTQPPVVPQAPPPPPPPPQQQPIRSLFQPQPLQPL 344
Query: 63 -PKTSPGSPRLQQGAG----LESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQ 117
P P P QG LE+P+ P +PQ+ +++H+ + +P
Sbjct: 345 LPVQHPHHPSPPQGMHMPPQLETPRMMMTPPPVTPQQPKNIHINPHFKGTVVTPVQVPLL 404
Query: 118 PKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGS---PEPYPGQ-QAPGPE 173
P PS+ P + + P PQH PVP S P P Q Q P
Sbjct: 405 PVPSQPRP-----------AVGPQRFPGPPEFPQHTPGPVPNSFSQPPRLPLQDQWRAPP 453
Query: 174 PSQPLLELTPRAPGSPR-------GQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKK 226
P Q G PR Q P PPP + + P
Sbjct: 454 PPQDRDPFFLGVSGEPRFPSHLFLEQRSPPPPPPPPTLLNSSHPVPTQSPLPFTQPGPAF 513
Query: 227 LNKEELPVIPKGKP 240
+ + PV P+ +P
Sbjct: 514 NQQGQQPVFPRERP 527
Score = 29.6 bits (65), Expect = 4.4
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 28/177 (15%)
Query: 63 PKTS---PGSPRLQ-QGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYS----PESP 114
PKTS P S +Q QG +++ + + + Q LH P + + P++P
Sbjct: 888 PKTSNFVPSSANMQYQGQQMKALKHLRQTRTVPQSQTQPLHKVLPIKPADVEEPAVPQTP 947
Query: 115 RC---QPKPSEEAPKCSQ-----------DQGVLASELAQNKEELTPGAPQHQLPPVPGS 160
R Q +P + P + D ++S++ K G P G
Sbjct: 948 RVASIQGRPQDTKPGVKRTVTHRTNSGGGDGPHISSKVRVIKLSGGGGESDGFFHP-EGQ 1006
Query: 161 PEPYPGQQAPGPEPSQPLLELT----PRAPGSPRGQHEPSKPPPAGETVTGGFGAKK 213
P+ P GP+P++ + LT + P P G H S PP +++ G AKK
Sbjct: 1007 PQRLPQPPEVGPQPARKVT-LTRGGLQQPPHLPAGPHAHSPVPPGIKSIQGIHPAKK 1062
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 56.2 bits (134), Expect = 4e-08
Identities = 54/202 (26%), Positives = 74/202 (36%), Gaps = 16/202 (7%)
Query: 14 LRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQ 73
LR ES+ ++ + L + E RE S + A PE P K P +P
Sbjct: 415 LRDAENESMAKIAELEKQLSQARKELETLRERFSESTAMGASRRPPE-PEKAPPAAPTRP 473
Query: 74 QGAGLESPQGQPE--------PGAASPQRQQDLHLESPQRQPEYSPESPRCQPKP----- 120
L+ + + + PG A + + +P +P P P P
Sbjct: 474 SALELKVEELEEKGLIRILRGPGDAVSIEILPVAVATPSGGDAPTPGVPTGSPSPDLAPA 533
Query: 121 SEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLE 180
+E AP + L + +E P AP Q PP+PGSPEP P PG P P
Sbjct: 534 AEPAPGAAPPPPPPLPGLP-SPQEAPPSAPP-QAPPLPGSPEPPPAPPLPGDLPPPPPPP 591
Query: 181 LTPRAPGSPRGQHEPSKPPPAG 202
P P P PPP G
Sbjct: 592 PPPPGTDGPVPPPPPPPPPPPG 613
Score = 50.1 bits (118), Expect = 3e-06
Identities = 52/191 (27%), Positives = 66/191 (34%), Gaps = 49/191 (25%)
Query: 15 RPESPESLTSVSRTRRALVEFESNPEET-------REPGSPPSVQ--RAGLGSPERPPKT 65
RP PE + TR + +E + E R PG S++ + +P
Sbjct: 458 RPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAVSIEILPVAVATPSGGDAP 517
Query: 66 SPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAP 125
+PG P L +P +P PGAA P L SPQ P +P P+ P P P
Sbjct: 518 TPGVPTGSPSPDL-APAAEPAPGAAPPPPPPLPGLPSPQEAPPSAP--PQAPPLPGSPEP 574
Query: 126 KCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGS-------PEPYPGQQAPGPEPSQPL 178
P AP P+PG P P PG P P P P
Sbjct: 575 ---------------------PPAP-----PLPGDLPPPPPPPPPPPGTDGPVPPPPPP- 607
Query: 179 LELTPRAPGSP 189
P PG P
Sbjct: 608 ---PPPPPGGP 615
Score = 32.7 bits (73), Expect = 0.52
Identities = 23/66 (34%), Positives = 25/66 (37%), Gaps = 9/66 (13%)
Query: 146 TPGAPQHQLPPVP-GSPEPY---PGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPA 201
TP P VP GSP P + APG P P P PG P Q P PP
Sbjct: 510 TPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPP-----PPLPGLPSPQEAPPSAPPQ 564
Query: 202 GETVTG 207
+ G
Sbjct: 565 APPLPG 570
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 55.8 bits (133), Expect = 6e-08
Identities = 62/236 (26%), Positives = 80/236 (33%), Gaps = 34/236 (14%)
Query: 31 ALVEFESNPEETREP-------GSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQG 83
AL ES+ E+ + G P + G P+RPP PG P+ G QG
Sbjct: 12 ALSSAESSSEDVSQEESLFLISGKPEGRRPQGGNQPQRPPPP-PGKPQGPPPQGGNQSQG 70
Query: 84 QPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKC-SQDQGVLASELAQNK 142
P P R P + S P KP P+ +Q QG +
Sbjct: 71 PPPPPGKPEGR--------PPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPER 122
Query: 143 EELTPGAPQHQLPPVPGSPE---PYPGQQAPGPEPSQPLLELTP-----------RAPGS 188
G H+ PP PG PE P G Q+ GP P E P PG
Sbjct: 123 PPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGK 182
Query: 189 PRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGR 244
P+G + P G G G + Q P + K + P P P+ GR
Sbjct: 183 PQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPP---PQGGR 235
Score = 42.4 bits (98), Expect = 7e-04
Identities = 39/131 (29%), Positives = 43/131 (32%), Gaps = 6/131 (4%)
Query: 45 PGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQP-EPGAASPQRQQDLHLESP 103
PG P G RPP PG P G QG P PG Q+ +
Sbjct: 117 PGKPERPPPQGGNQSHRPPPP-PGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRS 175
Query: 104 QRQPEYSPESPRCQP--KPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGS- 160
R P P+ P Q KP P A Q + G PQ PP G
Sbjct: 176 ARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPPQGGR 235
Query: 161 -PEPYPGQQAP 170
P P GQQ P
Sbjct: 236 PPRPAQGQQPP 246
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 55.5 bits (132), Expect = 7e-08
Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 51/346 (14%)
Query: 43 REPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLES 102
R G PPS PERP S + L++ ++ + + G A Q + D
Sbjct: 279 RGRGPPPS----WASEPERPSILS--ASELKELDKFDNLDAEADEGWAGAQMEVDY---- 328
Query: 103 PQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPE 162
Q +S + + P E S+DQG ASE +NK+E + +P P
Sbjct: 329 -TEQLNFSDDDEQGSNSPKENN---SEDQGSKASENNENKKETDEVSNTKSSSQIPAQPS 384
Query: 163 PYPGQQAPGPEPSQP--LLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGA--------- 211
GP +Q P P QH PPP + V G G
Sbjct: 385 VAKVPYGKGPSFNQERGTSSHLPPPPKLLAQQH----PPPDRQAVPGRPGPFPSKQQVAD 440
Query: 212 -----KKRKGSSSQAPAS-----KKLNKEELPVIPKGKP-----------KSGRVWKDRS 250
K+R+ S+ A+ K+ +EE + + K K G + K S
Sbjct: 441 EDEIWKQRRRQQSEISAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGILEKQPS 500
Query: 251 KKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRL 310
+ + ++K + + ++ QER+ ++ R ++EKE+ EK+Q + +++
Sbjct: 501 PEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKE-LEKEQEKQREMEKER 559
Query: 311 ENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLALLQKQPPQQP 356
+ E++ E+ + +L++ K+++ +++ L +K P++P
Sbjct: 560 KQEKEKELERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREP 605
Score = 35.4 bits (80), Expect = 0.080
Identities = 80/374 (21%), Positives = 129/374 (34%), Gaps = 88/374 (23%)
Query: 4 PLRRSRRLGGLRPESPESLTSVSRTRRALVEFESNPEET--REPGSPPSVQRAGLGSPER 61
PL R ++ G P S ES ++R+ R S P +P Q+A
Sbjct: 769 PLMRRDQMEG-SPNSSESFEHIARSARDHAISLSEPRMLWGSDPYPHAEPQQATTPKATE 827
Query: 62 PPKTSPGSPRLQQ-----GAGLESPQGQPEPGA------ASPQRQQDLHLESPQRQPEYS 110
P+ L Q +E Q + P A + Q Q+ L +P ++
Sbjct: 828 EPEDVRSEAALDQEQITAAYSVEHNQLEAHPKADFIRESSEAQVQKFLSRSVEDVRPHHT 887
Query: 111 PESPR--CQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQ 168
+ + C P ++ Q++ + A E +++ H P
Sbjct: 888 DANNQSACFEAPDQKTLSAPQEERISAVESQPSRKRSVSHGSNHTQKP-----------D 936
Query: 169 APGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKG--SSSQAPASKK 226
EPS + ++T R S P + P K++G SS+ P +K
Sbjct: 937 EQRSEPSAGIPKVTSRCIDSKEPIERPEEKP-------------KKEGFIRSSEGPKPEK 983
Query: 227 LNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARH 286
+ K KS W R + + D+P+R S K K R
Sbjct: 984 VYKS----------KSETRWGPRPSSNRREEVNDRPVRRSGPIK----------KPVLRD 1023
Query: 287 LEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLA 346
++EE+E+R+ EK+ +AE + + V+ P K EK+D
Sbjct: 1024 MKEEREQRK-EKEGEKAEKVTEK-----------VVVKPEK-----------TEKKD--- 1057
Query: 347 LLQKQPPQQPAAKI 360
L PP QP A I
Sbjct: 1058 LPPPPPPPQPPAPI 1071
Score = 33.5 bits (75), Expect = 0.30
Identities = 34/127 (26%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 41 ETREPGSPPSVQRA----GLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQ 96
E REP P V++ E P T S R ++ A + +PE G S R
Sbjct: 601 EPREPNLEPMVEKQESENSCNKEEEPVFTRQDSNRSEKEATPVVHETEPESG--SQPRPA 658
Query: 97 DLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPP 156
L Q Q P R Q + ++ + Q QGVL + T P H+
Sbjct: 659 VLSGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQGVLPQTVPSQPSSSTVPPPPHRPLY 718
Query: 157 VPGSPEP 163
P P P
Sbjct: 719 QPMQPHP 725
Score = 31.2 bits (69), Expect = 1.5
Identities = 45/214 (21%), Positives = 79/214 (36%), Gaps = 44/214 (20%)
Query: 16 PESPESLTSVSRTRRALVEFESNPEETREPGS---PPSVQRAGLGSPERPPKTSPGSPRL 72
P P + ++T + + NP +T S PPS++ +P G+ +
Sbjct: 1924 PAPPAPAQTQAQTHKPV----QNPLQTTSQSSKQPPPSIRLPSAQTPN-------GTDYV 1972
Query: 73 QQGAGLESPQG-----------QPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQP--- 118
G +++PQ + P A + L SP + P S +
Sbjct: 1973 ASGKSIQTPQSHGTLTAELWDNKVAPPAVLNDISKKLGPISPPQPPSVSAWNKPLTSFGS 2032
Query: 119 KPSEEAPKCSQDQGV-LASELAQ--------NKEELTPGAPQHQLPPVPGSPEPYPGQQA 169
PS E K Q+ G+ + ++ Q N+ E+ P + +P E Q
Sbjct: 2033 APSSEGAKNGQESGLEIGTDTIQFGAPASNGNENEVVPVLSEKSADKIPEPKEQRQKQPR 2092
Query: 170 PGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGE 203
GP +Q L +L+P +++ KP P G+
Sbjct: 2093 AGPIKAQKLPDLSP-------VENKEHKPGPIGK 2119
Score = 29.6 bits (65), Expect = 4.4
Identities = 48/204 (23%), Positives = 72/204 (35%), Gaps = 32/204 (15%)
Query: 85 PEPGAASPQRQQD--LHLESPQRQP---EYSPESPRCQPKPSEEAPKCSQDQGVLASELA 139
P P + + D + P ++P + E + + K E+A K ++ V+
Sbjct: 995 PRPSSNRREEVNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGEKAEKVTEK--VVVKPEK 1052
Query: 140 QNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGP-EPSQPLLELTPRAPGSPRGQHEPSKP 198
K++L P PP P P P Q P P +P T A + + + KP
Sbjct: 1053 TEKKDLPPP------PPPPQPPAPIQPQSVPPPIQPEAEKFPSTETATLAQKPSQDTEKP 1106
Query: 199 PPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELP-----VIPKGKPKSGRVWKDRSKKR 253
TV K + AP K+ + E VI + +P S K S
Sbjct: 1107 LEPVSTVQVEPAVKTVNQQTMAAPVVKEEKQPEKVISKDLVIERPRPDSRPAVKKES--- 1163
Query: 254 FSQMLQDKPLRTSWQRKMKERQER 277
P RT W KE +ER
Sbjct: 1164 ------TLPPRTYW----KEARER 1177
Score = 29.3 bits (64), Expect = 5.7
Identities = 39/177 (22%), Positives = 59/177 (33%), Gaps = 33/177 (18%)
Query: 50 SVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEY 109
S+ + G+ PP P S + + + P+ G +Q+ Q + E
Sbjct: 44 SLGKVGISRRMPPPANLP-SLKAENKGNDPNVNIVPKDGTGWASKQE-------QHEEEK 95
Query: 110 SPESPRCQPKPSEEAPK---------CSQDQGVLASELAQNKEELTPGAPQHQLPPVPGS 160
+PE P QPKP AP S QG + N + Q + P + +
Sbjct: 96 TPEVPPAQPKPGVAAPPEVAPAPKSWASNKQGGQGDGIQVNSQF------QQEFPSLQAA 149
Query: 161 -------PEPYPGQQAPGPE---PSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTG 207
E PGP P+ +A GSP + K P E+ G
Sbjct: 150 GDQEKKEKETNDDNYGPGPSLRPPNVACWRDGGKAAGSPSSSDQDEKLPGQDESTAG 206
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 55.1 bits (131), Expect = 1e-07
Identities = 53/174 (30%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 44 EPGSPPSVQRAGL---GSPERPPKTSPGSPRLQQGAGLE---SPQGQPE-PGAASPQRQQ 96
+PG+PP G G+ + PP SP P + P GQP P S R+
Sbjct: 642 KPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRY 701
Query: 97 DLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQ---DQGVLASELAQNKEELTPGAPQHQ 153
L SP + P + P P Q P SQ + L SE + TP PQ
Sbjct: 702 SSSL-SPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTP--PQTP 758
Query: 154 LPP-VPGSPEPYPGQQAP------GPEPSQPLLELTPRAPGSPRGQHEPSKPPP 200
PP P + P AP PE +QP PR P+ ++ PS PPP
Sbjct: 759 TPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 812
Score = 38.1 bits (87), Expect = 0.012
Identities = 44/161 (27%), Positives = 60/161 (37%), Gaps = 23/161 (14%)
Query: 55 GLGSPERP--PKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPE 112
G GSP +P P ++ + + + S Q QP+ A S Q L + P SP
Sbjct: 572 GDGSPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQ----LSMGQPHNAAGPSPH 627
Query: 113 SPR--------CQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPY 164
+ R PKP P G +S +Q+ L+P P P P +
Sbjct: 628 TLRRAVKKPAPAPPKPGNPPP--GHPGGQSSSGTSQHPPSLSPKPPTRS----PSPPTQH 681
Query: 165 PGQQAPGPEPSQPLLELTPRAPGSPRGQ-HEPSKPPPAGET 204
GQ P +PS P PR S P+ PPP T
Sbjct: 682 TGQ--PPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPT 720
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 55.1 bits (131), Expect = 1e-07
Identities = 53/174 (30%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 44 EPGSPPSVQRAGL---GSPERPPKTSPGSPRLQQGAGLE---SPQGQPE-PGAASPQRQQ 96
+PG+PP G G+ + PP SP P + P GQP P S R+
Sbjct: 564 KPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRY 623
Query: 97 DLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQ---DQGVLASELAQNKEELTPGAPQHQ 153
L SP + P + P P Q P SQ + L SE + TP PQ
Sbjct: 624 SSSL-SPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTP--PQTP 680
Query: 154 LPP-VPGSPEPYPGQQAP------GPEPSQPLLELTPRAPGSPRGQHEPSKPPP 200
PP P + P AP PE +QP PR P+ ++ PS PPP
Sbjct: 681 TPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSVPPP 734
Score = 39.3 bits (90), Expect = 0.006
Identities = 49/181 (27%), Positives = 64/181 (35%), Gaps = 23/181 (12%)
Query: 36 ESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQ---GQPEPGAASP 92
+S E + P S +V L E PPK G + Q GQ +P AA+
Sbjct: 473 DSGTLERKRPASM-AVMEGDLVKKESPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAG 531
Query: 93 QRQQDLHLESPQRQPEYSPESPR--------CQPKPSEEAPKCSQDQGVLASELAQNKEE 144
Q L + P SP + R PKP P G +S +Q+
Sbjct: 532 SHQ--LSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPP--GHPGGQSSSGTSQHPPS 587
Query: 145 LTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQ-HEPSKPPPAGE 203
L+P P P P + GQ P +PS P PR S P+ PPP
Sbjct: 588 LSPKPPTRS----PSPPTQHTGQ--PPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPP 641
Query: 204 T 204
T
Sbjct: 642 T 642
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 55.1 bits (131), Expect = 1e-07
Identities = 59/211 (27%), Positives = 79/211 (37%), Gaps = 15/211 (7%)
Query: 39 PEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDL 98
P + P PP+ Q E+P PG L Q G+ Q +PG A P QQ
Sbjct: 362 PAQPLGPAKPPAQQTGS----EKPSSEQPGPKALAQPPGVGKTPAQ-QPGPAKPPTQQVG 416
Query: 99 HLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVP 158
+ +QP +SP P P++ + + A + K P +P
Sbjct: 417 TPKPLAQQPGL--QSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLP 474
Query: 159 GSPEPYPGQQAPG-PEPSQPLLELTP-RAPGS---PRGQHEPSKPPP--AGETVTGGFGA 211
G +P P Q P P P QP P + PGS P Q P+KP P G T
Sbjct: 475 GPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQP 534
Query: 212 KKRKGSSSQ-APASKKLNKEELPVIPKGKPK 241
K S+ Q +PA + PV G K
Sbjct: 535 GSAKPSAQQPSPAKPSAQQSTKPVSQTGSGK 565
Score = 50.1 bits (118), Expect = 3e-06
Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 15/166 (9%)
Query: 42 TREPGSP-PSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQR----QQ 96
T++ G+P P Q+ GL SP + P P +QQ + P Q PG S Q+ +
Sbjct: 412 TQQVGTPKPLAQQPGLQSPAKAP--GPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKP 469
Query: 97 DLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPP 156
L P + P P + P+ A SQ G ++ P P Q P
Sbjct: 470 PSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPG----STKPPPQQPGPAKPSPQQPG 525
Query: 157 VPGSPEPYPGQQAPG---PEPSQPLLELTPRAPGSPRGQHEPSKPP 199
P PG P P P++P + + + P S G +P +PP
Sbjct: 526 STKPPSQQPGSAKPSAQQPSPAKPSAQQSTK-PVSQTGSGKPLQPP 570
Score = 46.6 bits (109), Expect = 3e-05
Identities = 88/386 (22%), Positives = 142/386 (36%), Gaps = 85/386 (22%)
Query: 42 TREPGS---PPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDL 98
+++PGS PP SP++P T P P Q G+ S Q QP P S Q+
Sbjct: 501 SQQPGSTKPPPQQPGPAKPSPQQPGSTKP--PSQQPGSAKPSAQ-QPSPAKPSAQQSTKP 557
Query: 99 HLESPQRQPEYSPE-SPRCQPKPSEEAPK-----------------------CSQDQGVL 134
++ +P P SP + PS+ PK C++ Q +
Sbjct: 558 VSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTV 617
Query: 135 AS--------ELAQNKEELTPGAPQHQ-----LPPVPGSPEPY-----------PGQQAP 170
S L + KE L + L PVP SP+P + +P
Sbjct: 618 CSLCGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSP 677
Query: 171 GPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGE--TVTGGFGAKKR---KGSSSQAPASK 225
P+ + P + P+ S EP KPPP + T+ G AK + + S PA
Sbjct: 678 QPQQTSPKKDAAPKQDLSK--APEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPP 735
Query: 226 K----LNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKP--LRTSWQRKMKERQERKL 279
K ++++ + KPK ++ K + S KP + Q + +E+ L
Sbjct: 736 KEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPL 795
Query: 280 AKDFARHLEE-----EKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAK-K 333
D A+ + EK K R A ++I +P +K +
Sbjct: 796 KTDSAKPSQSFPPTGEKVSPFDSK------------AIPRPASDSKIISHPGPSSESKGQ 843
Query: 334 KQLRSIEKRDTLALLQKQPPQQPAAK 359
KQ+ ++K++ Q + +P AK
Sbjct: 844 KQVDPVQKKEEPKKAQTKMSPKPDAK 869
Score = 44.7 bits (104), Expect = 1e-04
Identities = 58/251 (23%), Positives = 93/251 (37%), Gaps = 35/251 (13%)
Query: 36 ESNPEET--------REPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEP 87
E++ EET +E G P + + L ++PPK P QQG G + Q P
Sbjct: 183 EASQEETTKKQKVVQKEQGKPEGIIKPPL--QQQPPKPIPK----QQGPGRDPLQQDGTP 236
Query: 88 GAASPQRQQDLHLESPQ-----RQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNK 142
+ S Q+ + + + P + P +P++ + +A + Q +
Sbjct: 237 KSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIV-----RG 291
Query: 143 EELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPG--------SPRGQHE 194
E + P P PP+ P Q PG E SQP P P P
Sbjct: 292 ESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKP 351
Query: 195 PSKPPPAGETVTGGFGAKK--RKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKK 252
P +PP + G K + + S+ P+S++ + L P G K+ +K
Sbjct: 352 PVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKAL-AQPPGVGKTPAQQPGPAKP 410
Query: 253 RFSQMLQDKPL 263
Q+ KPL
Sbjct: 411 PTQQVGTPKPL 421
Score = 43.9 bits (102), Expect = 2e-04
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 36 ESNPEETREPGSPPSVQRAGLGSPERPPKTSPG--SPRLQQGAGLESPQGQP-------- 85
++ P +T + P+ + L P +PP PG P QQ + P QP
Sbjct: 453 QAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 86 EPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEEL 145
+PG A P QQ + P +QP + S + QP P++ + +Q S+ K
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPGSAKPSAQ-QPSPAKPS---AQQSTKPVSQTGSGKPLQ 568
Query: 146 TPG-APQHQLPPVPGSPE 162
P +P + PP G P+
Sbjct: 569 PPTVSPSAKQPPSQGLPK 586
Score = 43.1 bits (100), Expect = 4e-04
Identities = 47/213 (22%), Positives = 77/213 (36%), Gaps = 31/213 (14%)
Query: 37 SNPEETREPGSPPSVQRAGLGS--PERPPKTSPGSPRLQQGAGLESP-------QGQPEP 87
S P +EP P +A + P++P P + + + P Q Q E
Sbjct: 730 SKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEE 789
Query: 88 GAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTP 147
P L +S + + P + P S+ P+ + D +++ ++ +
Sbjct: 790 KTTPP-----LKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESK--- 841
Query: 148 GAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTG 207
Q Q+ PV EP Q P+P + P GSP P P AG+TV
Sbjct: 842 --GQKQVDPVQKKEEPKKAQTKMSPKP-----DAKPMPKGSPT---PPGPRPTAGQTVPT 891
Query: 208 GFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
+ K + S + LN + PK +P
Sbjct: 892 PQQSPKPQEQSRRF----SLNLGSITDAPKSQP 920
Score = 41.6 bits (96), Expect = 0.001
Identities = 57/223 (25%), Positives = 83/223 (37%), Gaps = 38/223 (17%)
Query: 33 VEFESNPEETREPGSP-PSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAAS 91
V+ + P++ + SP P + GSP +P PR G + +PQ P+P S
Sbjct: 849 VQKKEEPKKAQTKMSPKPDAKPMPKGSP------TPPGPRPTAGQTVPTPQQSPKPQEQS 902
Query: 92 PQRQQDLHLESPQRQPEYSPESPR--CQPKPSEEAPKCSQDQGVLASELAQN--KEELTP 147
R+ L+L S P+ P +P+ K L S Q + P
Sbjct: 903 --RRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGP 960
Query: 148 GAPQHQLP-----PVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGS----PRGQHEPS-- 196
GAP Q P P P GQ P P S P+ + T +AP + P+ + P+
Sbjct: 961 GAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKET-KAPAAEKLEPKAEQAPTVK 1019
Query: 197 ------KPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELP 233
KPPP + +K +A KL K P
Sbjct: 1020 RTETEKKPPPIKD-------SKSLTAEPQKAVLPTKLEKSPKP 1055
Score = 39.7 bits (91), Expect = 0.004
Identities = 82/360 (22%), Positives = 133/360 (36%), Gaps = 65/360 (18%)
Query: 1 MDTPLRRSRRLGGLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPE 60
M T RR R+G + +S+T +T+ L + S +T + SVQ +G+
Sbjct: 3484 MPTRSRRKARVG----KYGDSMTEADKTK-PLSKVSSIAVQTV---AEISVQTEPVGTIR 3535
Query: 61 RPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKP 120
P + +++ + +P+ + G+ Q + D +SPQ SP + +P P
Sbjct: 3536 TPSIRARVDAKVEIIKHISAPEKTYKGGSLGCQTEADSDTQSPQYLSATSPPKDKKRPTP 3595
Query: 121 SE--------------EAPKCSQDQGVLASELAQNKEELTPG------------------ 148
E AP + VL S ++ L+PG
Sbjct: 3596 LEIGYSSHLRADSTVQLAPSPPKSPKVLYSPIS----PLSPGKALESAFVPYEKPLPDDI 3651
Query: 149 APQHQLPP-----VPGSPEPYPGQQ--APGPEPSQPLLELTPRAPGSPRGQHEPSKPPPA 201
+PQ L P P SP+ Q P+P P + + RAP Q+
Sbjct: 3652 SPQKVLHPDMAKVPPASPKTAKMMQRSMSDPKPLSPTADESSRAP----FQYTEGYTTKG 3707
Query: 202 GETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDK 261
+T+T KK K + P + + G R+ + + R +++LQD
Sbjct: 3708 SQTMTSSGAQKKVKRTLPNPPPEEISTGTQSTFSTMGTVSRRRICRTNTMAR-AKILQD- 3765
Query: 262 PLRTSWQRKMKERQERKLAKDFARHLEEEKE-----RRRQEKKQRRAENLKRRLENERKA 316
+ + ER+ KL K A EEEKE R + RR E L + E +A
Sbjct: 3766 ---IDRELDLVERESAKLRKKQAELDEEEKEIDAKLRYLEMGINRRKEALLKEREKRERA 3822
Score = 32.7 bits (73), Expect = 0.52
Identities = 60/301 (19%), Positives = 108/301 (35%), Gaps = 68/301 (22%)
Query: 57 GSPERPPKTSPGSPRLQQGAGLESPQGQPEP---GAASPQRQQDLHLESPQRQPEYSPES 113
G P ++ PG+P Q A + P Q P G A P + + P ++ +P +
Sbjct: 950 GQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSI----PVKKETKAPAA 1005
Query: 114 PRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAP--- 170
+ +PK +E+AP + + ++ + LT PQ + P P P P
Sbjct: 1006 EKLEPK-AEQAPTVKRTETEKKPPPIKDSKSLT-AEPQKAVLPTKLEKSPKPESTCPLCK 1063
Query: 171 ---------------------------GPEPSQPLLEL---------TPRAPGSPRGQHE 194
G P+ L E+ T RA G
Sbjct: 1064 TELNIGSKDPPNFNTCTECKNQVCNLCGFNPTPHLTEIQEWLCLNCQTQRAISGQLGDIR 1123
Query: 195 PSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRF 254
P P+G + + + P KL K++ + K ++ +V ++ K+
Sbjct: 1124 KMPPAPSGPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEV---KTEAEKVILEKVKETL 1180
Query: 255 SQMLQDKPLRTSWQRKMKER----------------QERKLAKDFARHLEEEKERRRQEK 298
S M + P+ T+ Q++ + + +E+KL + + EEK+ +EK
Sbjct: 1181 S-MEKIPPMVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEK 1239
Query: 299 K 299
K
Sbjct: 1240 K 1240
Score = 31.6 bits (70), Expect = 1.2
Identities = 70/385 (18%), Positives = 135/385 (35%), Gaps = 53/385 (13%)
Query: 13 GLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRL 72
G P +P V + +A + P+ + P +V+R P K S
Sbjct: 984 GQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAP----TVKRTETEKKPPPIKDSKSLTAE 1039
Query: 73 QQGAGLESP-QGQPEPGAASPQRQQDLHLESPQRQPEYSP----ESPRCQPKPSEEAPKC 127
Q A L + + P+P + P + +L++ S P ++ ++ C P
Sbjct: 1040 PQKAVLPTKLEKSPKPESTCPLCKTELNIGSKD-PPNFNTCTECKNQVCNLCGFNPTPHL 1098
Query: 128 SQDQGVLASELAQNKEELTPGAPQHQLPPVPG----SPEPYPGQQAPGPEPSQPLLELTP 183
++ Q L + ++PP P SP P P + + P ++L
Sbjct: 1099 TEIQEWLCLNCQTQRAISGQLGDIRKMPPAPSGPKASPMPVPTESSSQKTAVPPQVKLVK 1158
Query: 184 RAPGSPRGQHEP------------SKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEE 231
+ + + E K PP T K+ + + AS K+
Sbjct: 1159 KQEQEVKTEAEKVILEKVKETLSMEKIPPMVTT-----DQKQEESKLEKDKASALQEKKP 1213
Query: 232 LPVIPKGKPKSGRVWKDRSKKRFSQML---QDKPLRTSWQRKMKERQERKLAKDFARHLE 288
LP K P+ ++ + K + +DK L + E Q+ L K + E
Sbjct: 1214 LPEEKKLIPEEEKIRSEEKKPLLEEKKPTPEDKKLLPEAKTSAPEEQKHDLLKSQVQIAE 1273
Query: 289 EEKERRRQEKKQRRAENLKRRL-------------ENERKAEVVQ------VIRNPAKLK 329
E+ E R K + + + ++ E+++ + ++ P +++
Sbjct: 1274 EKLEGRVAPKTVQEGKQPQTKMEGLPSGTPQSLPKEDDKTTKTIKEQPQPPCTAKPDQVE 1333
Query: 330 RAKKKQLRSIEKRDTLALLQKQPPQ 354
K+K + +K DT + Q + PQ
Sbjct: 1334 PGKEKTEKEDDKSDTSSSQQPKSPQ 1358
Score = 30.4 bits (67), Expect = 2.6
Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 10/112 (8%)
Query: 155 PPVPGSPEPYPGQQA--PGPEPSQPLLELTPRAPGSPRGQHEPS--KPPPAGETVTGGFG 210
PPVP P P PEPS+P + P P P +P+ P P G ++T
Sbjct: 2484 PPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSMT 2543
Query: 211 AKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKP 262
+ A KL P+ P S R K ++ L +P
Sbjct: 2544 L------NLVTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEP 2589
Score = 29.6 bits (65), Expect = 4.4
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 117 QPKPSEEAPKCSQDQGVLASE----LAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGP 172
Q KP+ + P S L ++ + +++ P PP P P P P P P
Sbjct: 2369 QEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLP 2428
Query: 173 EPSQPLLELTPR 184
P+ P + P+
Sbjct: 2429 PPTSPKPTILPK 2440
Score = 28.9 bits (63), Expect = 7.5
Identities = 44/218 (20%), Positives = 72/218 (33%), Gaps = 8/218 (3%)
Query: 23 TSVSRTRRALVEFESNPE--ETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLES 80
T T +L F NP E +E + LG P +SP P+L+ +
Sbjct: 611 TECQTTVCSLCGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSP-QPKLKTAPVTTT 669
Query: 81 PQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQ 140
+SPQ QQ + + + S +P P + P A + +
Sbjct: 670 SA----VSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPE 725
Query: 141 NKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSK-PP 199
P P+ P P + P+ +P +L + + + SK
Sbjct: 726 ADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQS 785
Query: 200 PAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPK 237
A E T K S S P +K++ + IP+
Sbjct: 786 QAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPR 823
Score = 28.5 bits (62), Expect = 9.8
Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Query: 41 ETREPGSPPSVQRAGL--GSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDL 98
+T + G P + GL G+P+ PK + + + + QP+P + Q +
Sbjct: 1283 KTVQEGKQPQTKMEGLPSGTPQSLPKEDDKTTK--------TIKEQPQPPCTAKPDQVEP 1334
Query: 99 HLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVP 158
E +++ + S S QPK +P+ D G + ++ + E+ P + +
Sbjct: 1335 GKEKTEKEDDKSDTSSSQQPK----SPQGLSDTGYSSDGISSSLGEIPSLIPTDEKDILK 1390
Query: 159 GSPEPYPGQQAPGPEPS 175
G + Q++ PS
Sbjct: 1391 GLKKDSFSQESSPSSPS 1407
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 55.1 bits (131), Expect = 1e-07
Identities = 59/211 (27%), Positives = 79/211 (37%), Gaps = 15/211 (7%)
Query: 39 PEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDL 98
P + P PP+ Q E+P PG L Q G+ Q +PG A P QQ
Sbjct: 362 PAQPLGPAKPPAQQTGS----EKPSSEQPGPKALAQPPGVGKTPAQ-QPGPAKPPTQQVG 416
Query: 99 HLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVP 158
+ +QP +SP P P++ + + A + K P +P
Sbjct: 417 TPKPLAQQPGL--QSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLP 474
Query: 159 GSPEPYPGQQAPG-PEPSQPLLELTP-RAPGS---PRGQHEPSKPPP--AGETVTGGFGA 211
G +P P Q P P P QP P + PGS P Q P+KP P G T
Sbjct: 475 GPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQP 534
Query: 212 KKRKGSSSQ-APASKKLNKEELPVIPKGKPK 241
K S+ Q +PA + PV G K
Sbjct: 535 GSAKPSAQQPSPAKPSAQQSTKPVSQTGSGK 565
Score = 50.1 bits (118), Expect = 3e-06
Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 15/166 (9%)
Query: 42 TREPGSP-PSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQR----QQ 96
T++ G+P P Q+ GL SP + P P +QQ + P Q PG S Q+ +
Sbjct: 412 TQQVGTPKPLAQQPGLQSPAKAP--GPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKP 469
Query: 97 DLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPP 156
L P + P P + P+ A SQ G ++ P P Q P
Sbjct: 470 PSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPG----STKPPPQQPGPAKPSPQQPG 525
Query: 157 VPGSPEPYPGQQAPG---PEPSQPLLELTPRAPGSPRGQHEPSKPP 199
P PG P P P++P + + + P S G +P +PP
Sbjct: 526 STKPPSQQPGSAKPSAQQPSPAKPSAQQSTK-PVSQTGSGKPLQPP 570
Score = 46.6 bits (109), Expect = 3e-05
Identities = 88/386 (22%), Positives = 142/386 (36%), Gaps = 85/386 (22%)
Query: 42 TREPGS---PPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDL 98
+++PGS PP SP++P T P P Q G+ S Q QP P S Q+
Sbjct: 501 SQQPGSTKPPPQQPGPAKPSPQQPGSTKP--PSQQPGSAKPSAQ-QPSPAKPSAQQSTKP 557
Query: 99 HLESPQRQPEYSPE-SPRCQPKPSEEAPK-----------------------CSQDQGVL 134
++ +P P SP + PS+ PK C++ Q +
Sbjct: 558 VSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTV 617
Query: 135 AS--------ELAQNKEELTPGAPQHQ-----LPPVPGSPEPY-----------PGQQAP 170
S L + KE L + L PVP SP+P + +P
Sbjct: 618 CSLCGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSP 677
Query: 171 GPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGE--TVTGGFGAKKR---KGSSSQAPASK 225
P+ + P + P+ S EP KPPP + T+ G AK + + S PA
Sbjct: 678 QPQQTSPKKDAAPKQDLSK--APEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPP 735
Query: 226 K----LNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKP--LRTSWQRKMKERQERKL 279
K ++++ + KPK ++ K + S KP + Q + +E+ L
Sbjct: 736 KEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPL 795
Query: 280 AKDFARHLEE-----EKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAK-K 333
D A+ + EK K R A ++I +P +K +
Sbjct: 796 KTDSAKPSQSFPPTGEKVSPFDSK------------AIPRPASDSKIISHPGPSSESKGQ 843
Query: 334 KQLRSIEKRDTLALLQKQPPQQPAAK 359
KQ+ ++K++ Q + +P AK
Sbjct: 844 KQVDPVQKKEEPKKAQTKMSPKPDAK 869
Score = 44.7 bits (104), Expect = 1e-04
Identities = 58/251 (23%), Positives = 93/251 (37%), Gaps = 35/251 (13%)
Query: 36 ESNPEET--------REPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEP 87
E++ EET +E G P + + L ++PPK P QQG G + Q P
Sbjct: 183 EASQEETTKKQKVVQKEQGKPEGIIKPPL--QQQPPKPIPK----QQGPGRDPLQQDGTP 236
Query: 88 GAASPQRQQDLHLESPQ-----RQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNK 142
+ S Q+ + + + P + P +P++ + +A + Q +
Sbjct: 237 KSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIV-----RG 291
Query: 143 EELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPG--------SPRGQHE 194
E + P P PP+ P Q PG E SQP P P P
Sbjct: 292 ESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKP 351
Query: 195 PSKPPPAGETVTGGFGAKK--RKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKK 252
P +PP + G K + + S+ P+S++ + L P G K+ +K
Sbjct: 352 PVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKAL-AQPPGVGKTPAQQPGPAKP 410
Query: 253 RFSQMLQDKPL 263
Q+ KPL
Sbjct: 411 PTQQVGTPKPL 421
Score = 43.9 bits (102), Expect = 2e-04
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 36 ESNPEETREPGSPPSVQRAGLGSPERPPKTSPG--SPRLQQGAGLESPQGQP-------- 85
++ P +T + P+ + L P +PP PG P QQ + P QP
Sbjct: 453 QAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 86 EPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEEL 145
+PG A P QQ + P +QP + S + QP P++ + +Q S+ K
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPGSAKPSAQ-QPSPAKPS---AQQSTKPVSQTGSGKPLQ 568
Query: 146 TPG-APQHQLPPVPGSPE 162
P +P + PP G P+
Sbjct: 569 PPTVSPSAKQPPSQGLPK 586
Score = 43.1 bits (100), Expect = 4e-04
Identities = 47/213 (22%), Positives = 77/213 (36%), Gaps = 31/213 (14%)
Query: 37 SNPEETREPGSPPSVQRAGLGS--PERPPKTSPGSPRLQQGAGLESP-------QGQPEP 87
S P +EP P +A + P++P P + + + P Q Q E
Sbjct: 730 SKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEE 789
Query: 88 GAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTP 147
P L +S + + P + P S+ P+ + D +++ ++ +
Sbjct: 790 KTTPP-----LKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESK--- 841
Query: 148 GAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVTG 207
Q Q+ PV EP Q P+P + P GSP P P AG+TV
Sbjct: 842 --GQKQVDPVQKKEEPKKAQTKMSPKP-----DAKPMPKGSPT---PPGPRPTAGQTVPT 891
Query: 208 GFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 240
+ K + S + LN + PK +P
Sbjct: 892 PQQSPKPQEQSRRF----SLNLGSITDAPKSQP 920
Score = 41.6 bits (96), Expect = 0.001
Identities = 57/223 (25%), Positives = 83/223 (37%), Gaps = 38/223 (17%)
Query: 33 VEFESNPEETREPGSP-PSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAAS 91
V+ + P++ + SP P + GSP +P PR G + +PQ P+P S
Sbjct: 849 VQKKEEPKKAQTKMSPKPDAKPMPKGSP------TPPGPRPTAGQTVPTPQQSPKPQEQS 902
Query: 92 PQRQQDLHLESPQRQPEYSPESPR--CQPKPSEEAPKCSQDQGVLASELAQN--KEELTP 147
R+ L+L S P+ P +P+ K L S Q + P
Sbjct: 903 --RRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGP 960
Query: 148 GAPQHQLP-----PVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGS----PRGQHEPS-- 196
GAP Q P P P GQ P P S P+ + T +AP + P+ + P+
Sbjct: 961 GAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKET-KAPAAEKLEPKAEQAPTVK 1019
Query: 197 ------KPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELP 233
KPPP + +K +A KL K P
Sbjct: 1020 RTETEKKPPPIKD-------SKSLTAEPQKAVLPTKLEKSPKP 1055
Score = 39.7 bits (91), Expect = 0.004
Identities = 82/360 (22%), Positives = 133/360 (36%), Gaps = 65/360 (18%)
Query: 1 MDTPLRRSRRLGGLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPE 60
M T RR R+G + +S+T +T+ L + S +T + SVQ +G+
Sbjct: 3484 MPTRSRRKARVG----KYGDSMTEADKTK-PLSKVSSIAVQTV---AEISVQTEPVGTIR 3535
Query: 61 RPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKP 120
P + +++ + +P+ + G+ Q + D +SPQ SP + +P P
Sbjct: 3536 TPSIRARVDAKVEIIKHISAPEKTYKGGSLGCQTEADSDTQSPQYLSATSPPKDKKRPTP 3595
Query: 121 SE--------------EAPKCSQDQGVLASELAQNKEELTPG------------------ 148
E AP + VL S ++ L+PG
Sbjct: 3596 LEIGYSSHLRADSTVQLAPSPPKSPKVLYSPIS----PLSPGKALESAFVPYEKPLPDDI 3651
Query: 149 APQHQLPP-----VPGSPEPYPGQQ--APGPEPSQPLLELTPRAPGSPRGQHEPSKPPPA 201
+PQ L P P SP+ Q P+P P + + RAP Q+
Sbjct: 3652 SPQKVLHPDMAKVPPASPKTAKMMQRSMSDPKPLSPTADESSRAP----FQYTEGYTTKG 3707
Query: 202 GETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDK 261
+T+T KK K + P + + G R+ + + R +++LQD
Sbjct: 3708 SQTMTSSGAQKKVKRTLPNPPPEEISTGTQSTFSTMGTVSRRRICRTNTMAR-AKILQD- 3765
Query: 262 PLRTSWQRKMKERQERKLAKDFARHLEEEKE-----RRRQEKKQRRAENLKRRLENERKA 316
+ + ER+ KL K A EEEKE R + RR E L + E +A
Sbjct: 3766 ---IDRELDLVERESAKLRKKQAELDEEEKEIDAKLRYLEMGINRRKEALLKEREKRERA 3822
Score = 32.7 bits (73), Expect = 0.52
Identities = 60/301 (19%), Positives = 108/301 (35%), Gaps = 68/301 (22%)
Query: 57 GSPERPPKTSPGSPRLQQGAGLESPQGQPEP---GAASPQRQQDLHLESPQRQPEYSPES 113
G P ++ PG+P Q A + P Q P G A P + + P ++ +P +
Sbjct: 950 GQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSI----PVKKETKAPAA 1005
Query: 114 PRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAP--- 170
+ +PK +E+AP + + ++ + LT PQ + P P P P
Sbjct: 1006 EKLEPK-AEQAPTVKRTETEKKPPPIKDSKSLT-AEPQKAVLPTKLEKSPKPESTCPLCK 1063
Query: 171 ---------------------------GPEPSQPLLEL---------TPRAPGSPRGQHE 194
G P+ L E+ T RA G
Sbjct: 1064 TELNIGSKDPPNFNTCTECKNQVCNLCGFNPTPHLTEIQEWLCLNCQTQRAISGQLGDIR 1123
Query: 195 PSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRF 254
P P+G + + + P KL K++ + K ++ +V ++ K+
Sbjct: 1124 KMPPAPSGPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEV---KTEAEKVILEKVKETL 1180
Query: 255 SQMLQDKPLRTSWQRKMKER----------------QERKLAKDFARHLEEEKERRRQEK 298
S M + P+ T+ Q++ + + +E+KL + + EEK+ +EK
Sbjct: 1181 S-MEKIPPMVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEK 1239
Query: 299 K 299
K
Sbjct: 1240 K 1240
Score = 31.6 bits (70), Expect = 1.2
Identities = 70/385 (18%), Positives = 135/385 (35%), Gaps = 53/385 (13%)
Query: 13 GLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRL 72
G P +P V + +A + P+ + P +V+R P K S
Sbjct: 984 GQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAP----TVKRTETEKKPPPIKDSKSLTAE 1039
Query: 73 QQGAGLESP-QGQPEPGAASPQRQQDLHLESPQRQPEYSP----ESPRCQPKPSEEAPKC 127
Q A L + + P+P + P + +L++ S P ++ ++ C P
Sbjct: 1040 PQKAVLPTKLEKSPKPESTCPLCKTELNIGSKD-PPNFNTCTECKNQVCNLCGFNPTPHL 1098
Query: 128 SQDQGVLASELAQNKEELTPGAPQHQLPPVPG----SPEPYPGQQAPGPEPSQPLLELTP 183
++ Q L + ++PP P SP P P + + P ++L
Sbjct: 1099 TEIQEWLCLNCQTQRAISGQLGDIRKMPPAPSGPKASPMPVPTESSSQKTAVPPQVKLVK 1158
Query: 184 RAPGSPRGQHEP------------SKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEE 231
+ + + E K PP T K+ + + AS K+
Sbjct: 1159 KQEQEVKTEAEKVILEKVKETLSMEKIPPMVTT-----DQKQEESKLEKDKASALQEKKP 1213
Query: 232 LPVIPKGKPKSGRVWKDRSKKRFSQML---QDKPLRTSWQRKMKERQERKLAKDFARHLE 288
LP K P+ ++ + K + +DK L + E Q+ L K + E
Sbjct: 1214 LPEEKKLIPEEEKIRSEEKKPLLEEKKPTPEDKKLLPEAKTSAPEEQKHDLLKSQVQIAE 1273
Query: 289 EEKERRRQEKKQRRAENLKRRL-------------ENERKAEVVQ------VIRNPAKLK 329
E+ E R K + + + ++ E+++ + ++ P +++
Sbjct: 1274 EKLEGRVAPKTVQEGKQPQTKMEGLPSGTPQSLPKEDDKTTKTIKEQPQPPCTAKPDQVE 1333
Query: 330 RAKKKQLRSIEKRDTLALLQKQPPQ 354
K+K + +K DT + Q + PQ
Sbjct: 1334 PGKEKTEKEDDKSDTSSSQQPKSPQ 1358
Score = 30.4 bits (67), Expect = 2.6
Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 10/112 (8%)
Query: 155 PPVPGSPEPYPGQQA--PGPEPSQPLLELTPRAPGSPRGQHEPS--KPPPAGETVTGGFG 210
PPVP P P PEPS+P + P P P +P+ P P G ++T
Sbjct: 2484 PPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSMT 2543
Query: 211 AKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKP 262
+ A KL P+ P S R K ++ L +P
Sbjct: 2544 L------NLVTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEP 2589
Score = 29.6 bits (65), Expect = 4.4
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 117 QPKPSEEAPKCSQDQGVLASE----LAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGP 172
Q KP+ + P S L ++ + +++ P PP P P P P P P
Sbjct: 2369 QEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLP 2428
Query: 173 EPSQPLLELTPR 184
P+ P + P+
Sbjct: 2429 PPTSPKPTILPK 2440
Score = 28.9 bits (63), Expect = 7.5
Identities = 44/218 (20%), Positives = 72/218 (33%), Gaps = 8/218 (3%)
Query: 23 TSVSRTRRALVEFESNPE--ETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLES 80
T T +L F NP E +E + LG P +SP P+L+ +
Sbjct: 611 TECQTTVCSLCGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSP-QPKLKTAPVTTT 669
Query: 81 PQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQ 140
+SPQ QQ + + + S +P P + P A + +
Sbjct: 670 SA----VSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPE 725
Query: 141 NKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSK-PP 199
P P+ P P + P+ +P +L + + + SK
Sbjct: 726 ADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQS 785
Query: 200 PAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPK 237
A E T K S S P +K++ + IP+
Sbjct: 786 QAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPR 823
Score = 28.5 bits (62), Expect = 9.8
Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Query: 41 ETREPGSPPSVQRAGL--GSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDL 98
+T + G P + GL G+P+ PK + + + + QP+P + Q +
Sbjct: 1283 KTVQEGKQPQTKMEGLPSGTPQSLPKEDDKTTK--------TIKEQPQPPCTAKPDQVEP 1334
Query: 99 HLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVP 158
E +++ + S S QPK +P+ D G + ++ + E+ P + +
Sbjct: 1335 GKEKTEKEDDKSDTSSSQQPK----SPQGLSDTGYSSDGISSSLGEIPSLIPTDEKDILK 1390
Query: 159 GSPEPYPGQQAPGPEPS 175
G + Q++ PS
Sbjct: 1391 GLKKDSFSQESSPSSPS 1407
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 54.3 bits (129), Expect = 2e-07
Identities = 51/159 (32%), Positives = 63/159 (39%), Gaps = 20/159 (12%)
Query: 46 GSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQR 105
G+P G P+ PP PG P+ G PQG P PG PQ PQ
Sbjct: 34 GNPQGPSPQGGNKPQGPPPP-PGKPQGPPPQGGNKPQGPPPPG--KPQGPP------PQG 84
Query: 106 QPEYSPESPRCQPK---PSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPE 162
SP SP +P+ P P+ QG S+ A++ G PQ + G P
Sbjct: 85 DKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPP 144
Query: 163 PYPG--QQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPP 199
P G QQ P QP + PR P R PS+PP
Sbjct: 145 PAGGNPQQPQAPPAGQP--QGPPRPPQGGR----PSRPP 177
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 15 RPESPESLTSVSRTRRALV-EFESNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQ 73
+P+ P SR+ R+ + + P + +P PP+ Q R P P P Q
Sbjct: 76 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPA-QGGSKSQSARSPPGKPQGPPQQ 134
Query: 74 QGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR 115
+G +PQG P P +PQ+ Q P QP+ P P+
Sbjct: 135 EG---NNPQGPPPPAGGNPQQPQ----APPAGQPQGPPRPPQ 169
Score = 35.8 bits (81), Expect = 0.061
Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 147 PGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGETVT 206
PG PQ PP G +P G PG P R+P SP G +P PPP G
Sbjct: 54 PGKPQG--PPPQGGNKP-QGPPPPGKPQGPPPQGDKSRSPRSPPG--KPQGPPPQGGKPQ 108
Query: 207 GGFGAKKRKGSSSQAPASK 225
G K S+++P K
Sbjct: 109 GPPAQGGSKSQSARSPPGK 127
Score = 33.5 bits (75), Expect = 0.30
Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 24/120 (20%)
Query: 133 VLASELAQNKEELTPGAPQHQLPPV----PGSPEPYPGQQAPGPEPSQPLLELTPRAPGS 188
+LA AQN E Q + P + P P P G + GP P PG
Sbjct: 10 LLALSSAQNLNE---DVSQEESPSLIAGNPQGPSPQGGNKPQGPPPP----------PGK 56
Query: 189 PRGQ-----HEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSG 243
P+G ++P PPP G+ G + K S ++P K P+G P G
Sbjct: 57 PQGPPPQGGNKPQGPPPPGK--PQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQG 114
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 53.9 bits (128), Expect = 2e-07
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 212 KKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKM 271
K+R+ + +K K E K K K K+R +KR + Q K R +RK
Sbjct: 38 KERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKR 97
Query: 272 KERQERKLAKDFARH----LEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAK 327
K+ ++++ K R +E KER R+ K++R + KRR + RK + R +
Sbjct: 98 KKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRE 157
Query: 328 LKRAKKKQLRSIEKRD 343
KR K+K+ +KR+
Sbjct: 158 RKRKKRKKEEREKKRE 173
Score = 51.2 bits (121), Expect = 1e-06
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 225 KKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFA 284
+K KE+ K + + R K K+R + Q + + +RK K R+ERK K+
Sbjct: 95 RKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERG 154
Query: 285 RHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRD 343
+ + K+R+++E++++R N K R + ER+ + + + K +R KKK+ + K D
Sbjct: 155 KRERKRKKRKKEEREKKRERNRKER-KKERERKERRERKKERKKERRKKKERKKDRKTD 212
Score = 47.8 bits (112), Expect = 2e-05
Identities = 33/135 (24%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 212 KKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKM 271
+KRK Q ++ + + K + + R ++R KK+ + +++ + +RK
Sbjct: 77 RKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKK-ERKERERENKQRRERKR 135
Query: 272 KERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLE---NERKAEVVQVIRNPAKL 328
K+R+++K K+ R E+E+ +R +++K+R+ E +++ E ERK E + R K
Sbjct: 136 KKRRKKKRRKE--RKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKK 193
Query: 329 KRAKKKQLRSIEKRD 343
+R K+++ + K+D
Sbjct: 194 ERKKERRKKKERKKD 208
Score = 42.0 bits (97), Expect = 9e-04
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 239 KPKSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKER---QERK---LAKDFARHLEEEKE 292
+ K R + R ++R + +++ + +RK +ER +ERK K E+E+
Sbjct: 36 RKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERR 95
Query: 293 RRRQEKKQR------RAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRD 343
+R++EKK+R R E K++ ER+ E Q R K K+ +KK+ R KR+
Sbjct: 96 KRKKEKKKRERKQRGRRERKKKKERKERERENKQ--RRERKRKKRRKKKRRKERKRE 150
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 261 KPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQ 320
KP + KER+ER+ K R E ++ER ++EKK+R+ + E +RK Q
Sbjct: 27 KPCTQRESERKKERREREKRKR-EREKERKRERGKKEKKKRKKRERGKERERKRKEREKQ 85
Query: 321 VIRNPAKLKRAKKKQLRSIEKR 342
K +R +KK+ + E++
Sbjct: 86 RKERREKERRKRKKEKKKRERK 107
Score = 40.4 bits (93), Expect = 0.002
Identities = 25/97 (25%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 250 SKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQE----KKQRRAEN 305
S+++ + ++K R + + +ER +++ K R +E+ER+R+E +K+RR +
Sbjct: 34 SERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKE 93
Query: 306 LKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKR 342
++R + ++K E Q R K K+ +K++ R ++R
Sbjct: 94 RRKRKKEKKKRERKQRGRRERKKKKERKERERENKQR 130
Score = 37.7 bits (86), Expect = 0.016
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 190 RGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDR 249
RG+ E K E ++RK + +K K E + + + R ++R
Sbjct: 109 RGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEER 168
Query: 250 SKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRR 309
KKR + K +R+ KER+ERK +E+++ R++KK+R+ + R+
Sbjct: 169 EKKRERNRKERKK-----ERERKERRERK----------KERKKERRKKKERKKD---RK 210
Query: 310 LENERKAEVVQVIRNPA 326
+ + ++V + +R A
Sbjct: 211 TDRQTDSQVFRPLRESA 227
Score = 29.6 bits (65), Expect = 4.4
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 279 LAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQ 335
++K + E K+ RR+ +K++R +R+ E +K + + R K + K+K+
Sbjct: 25 ISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKE 81
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 53.9 bits (128), Expect = 2e-07
Identities = 47/169 (27%), Positives = 67/169 (39%), Gaps = 27/169 (15%)
Query: 45 PGSPPSVQRAGLGSPERPPKTSPGSPRLQQGA----------GLESPQGQPEPGAASPQR 94
PG P Q +P+R P T G + G G + P G + G
Sbjct: 418 PGQPYGSQ-----TPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYN 472
Query: 95 QQDLHLESPQRQPEYSPESPRCQP--KPSEEAPKCSQDQGVLASELAQNKEELTPGAPQH 152
QQ H + Q+QP YS + P P +PS + SQ + +S+ P + Q
Sbjct: 473 QQSPHPQ--QQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQ--------PPYSQQP 522
Query: 153 QLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPA 201
PP SP PYP QQ+ + Q + SP Q +P +P P+
Sbjct: 523 SQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPS 571
Score = 44.7 bits (104), Expect = 1e-04
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 11/143 (7%)
Query: 38 NPEETREPGS--PPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQ-- 93
+P++ + P S PPS S ++ P++ P P+LQ S Q P SP
Sbjct: 477 HPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQP--PQLQSSQPPYSQQPSQPPHQQSPAPY 534
Query: 94 -RQQDLHLESPQRQPEYSP---ESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGA 149
QQ + PQ QP YS +SP Q +P + AP Q +Q ++ T +
Sbjct: 535 PSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQ-TAYS 593
Query: 150 PQHQLPPVPGSPEPYPGQQAPGP 172
Q PP S + + Q + P
Sbjct: 594 QQRFPPPQELSQDSFGSQASSAP 616
Score = 39.3 bits (90), Expect = 0.006
Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 22/145 (15%)
Query: 39 PEETREPGSP-----PSVQRAGLGSPER-PPKTSPGSPRLQQGAGLE-SPQGQPEPGAAS 91
PE G+P PS +G+ SP R PP+ + G + S QG P G+
Sbjct: 1296 PEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPS-GSPF 1354
Query: 92 PQRQQDLHLESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQ 151
P +Q ++ Q+Q Y +P P + +G + S + G PQ
Sbjct: 1355 PSQQTTMY---QQQQQNYK------RPMDGTYGPPAKRHEGEMYSVPYSTGQ----GQPQ 1401
Query: 152 HQLPPVPGSPEPYPGQQAPGPEPSQ 176
Q P P P+P QQA P P Q
Sbjct: 1402 QQQLP-PAQPQPASQQQAAQPSPQQ 1425
Score = 36.6 bits (83), Expect = 0.036
Identities = 65/335 (19%), Positives = 117/335 (34%), Gaps = 34/335 (10%)
Query: 46 GSPPSVQRAGLGSPERPPK-----TSPGSPRLQQGAGLESPQGQPEPG------------ 88
G PS G P P TSP S R QG G P+ G
Sbjct: 276 GGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQ 335
Query: 89 ---AASPQRQQDLHLESPQRQPEYSPESPRCQP---KPSEEAPKCSQDQGVLASELAQNK 142
AA+ Q++ ++P SP +P P+ S + Q
Sbjct: 336 CWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPY 395
Query: 143 EELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAG 202
P + Q P P YPGQ P + + + RA + G + PP G
Sbjct: 396 GGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYG 455
Query: 203 ETVTGGFGAK-KRKGSSSQAPASKKLNKEELPVIPKGKPKSGRVWKDRSKKRFSQMLQDK 261
+ G+G + + + Q+P ++ P P + ++ + + + Q+ +
Sbjct: 456 QQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQ 515
Query: 262 PLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQRRAENLKRRLENERKAEVVQV 321
P S Q Q+ + ++ + + Q +A++ ++ + ++ A
Sbjct: 516 P-PYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPA----- 569
Query: 322 IRNPAKL-KRAKKKQLRSIEKRDTLALLQKQPPQQ 355
P+ L ++A Q +S + + T Q+ PP Q
Sbjct: 570 ---PSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQ 601
Score = 33.9 bits (76), Expect = 0.23
Identities = 49/209 (23%), Positives = 77/209 (36%), Gaps = 29/209 (13%)
Query: 37 SNPEETREPGSPPSVQRAG-----LGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAAS 91
S P +++P PP Q + ++ P++ P P Q A Q QP+ A S
Sbjct: 514 SQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQP--PYSQPQAQSPYQQQQPQQPAPS 571
Query: 92 PQRQQDLHLESPQRQPEYSPESPRCQPKPSEEA-----PKCSQDQGVLASELAQNKEELT 146
QQ + + +Q + + S + P P E + + S + +S+ Q L+
Sbjct: 572 TLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLS 631
Query: 147 PGAPQHQLPPVPGSPEPY---------PGQQAPGPEPSQPLLELTPRAPGSPR-GQHEPS 196
+ LP + GS + PG G SQ ++P SP H P
Sbjct: 632 LQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPG 691
Query: 197 ----KPPPAGETVTGGFGAKKRKGSSSQA 221
P P G + A+ R G S A
Sbjct: 692 IRGPSPSPVGSPAS---VAQSRSGPLSPA 717
Score = 29.6 bits (65), Expect = 4.4
Identities = 27/98 (27%), Positives = 33/98 (33%), Gaps = 22/98 (22%)
Query: 148 GAPQHQLPPVPGSPEPYPGQQA-PGPEPSQPLLELTPRAPGSPRGQHEPSKPPPAGET-- 204
G P HQ YP + A P P P+ L PGS SKPPP+
Sbjct: 206 GFPNHQYNSY------YPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASA 259
Query: 205 -------------VTGGFGAKKRKGSSSQAPASKKLNK 229
GG G G + Q A+ LN+
Sbjct: 260 SSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQ 297
Score = 29.6 bits (65), Expect = 4.4
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 101 ESPQRQPEYSPESPRCQPKPSEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPG 159
+S + QP+ P SP S + P+ Q +E K P Q+PP+PG
Sbjct: 1122 DSKKSQPKIQPPSPA--GSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPG 1178
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.127 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,426,338
Number of Sequences: 37866
Number of extensions: 1513666
Number of successful extensions: 26113
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 2122
Number of HSP's that attempted gapping in prelim test: 10676
Number of HSP's gapped (non-prelim): 10152
length of query: 360
length of database: 18,247,518
effective HSP length: 103
effective length of query: 257
effective length of database: 14,347,320
effective search space: 3687261240
effective search space used: 3687261240
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.