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Search of human proteins with 13129078
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13129078 alveolar soft part sarcoma chromosome region,
candidate 1 [Homo sapiens]
(553 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13129078 alveolar soft part sarcoma chromosome region, candid... 1116 0.0
gi|13376854 UBX domain protein 6 [Homo sapiens] 70 7e-12
gi|56549694 enabled homolog isoform a [Homo sapiens] 48 3e-05
gi|39930375 enabled homolog isoform b [Homo sapiens] 48 3e-05
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 46 8e-05
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 46 1e-04
gi|24497589 aristaless related homeobox [Homo sapiens] 46 1e-04
gi|116734689 socius isoform 3 [Homo sapiens] 45 2e-04
gi|116734681 socius isoform 1 [Homo sapiens] 45 2e-04
gi|116734679 socius isoform 2 [Homo sapiens] 45 2e-04
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 45 2e-04
gi|91208420 bassoon protein [Homo sapiens] 44 4e-04
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 43 7e-04
gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens] 43 9e-04
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 42 0.001
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 41 0.003
gi|20149635 p47 protein isoform a [Homo sapiens] 41 0.003
gi|33286434 p47 protein isoform c [Homo sapiens] 41 0.003
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 41 0.003
gi|160707881 formin 2 [Homo sapiens] 40 0.006
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 40 0.006
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 40 0.006
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 40 0.007
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 39 0.010
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 39 0.010
gi|55741677 SET domain containing 1A [Homo sapiens] 39 0.010
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 39 0.010
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa... 39 0.010
gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo sa... 39 0.010
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 39 0.010
>gi|13129078 alveolar soft part sarcoma chromosome region, candidate
1 [Homo sapiens]
Length = 553
Score = 1116 bits (2886), Expect = 0.0
Identities = 553/553 (100%), Positives = 553/553 (100%)
Query: 1 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD 60
MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD
Sbjct: 1 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD 60
Query: 61 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH 120
LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH
Sbjct: 61 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH 120
Query: 121 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK 180
FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK
Sbjct: 121 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK 180
Query: 181 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA 240
TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA
Sbjct: 181 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA 240
Query: 241 PFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE 300
PFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE
Sbjct: 241 PFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE 300
Query: 301 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK 360
RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK
Sbjct: 301 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK 360
Query: 361 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV 420
SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV
Sbjct: 361 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV 420
Query: 421 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA 480
RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA
Sbjct: 421 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA 480
Query: 481 ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG 540
ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG
Sbjct: 481 ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG 540
Query: 541 KVPKWLKLPASKR 553
KVPKWLKLPASKR
Sbjct: 541 KVPKWLKLPASKR 553
>gi|13376854 UBX domain protein 6 [Homo sapiens]
Length = 441
Score = 69.7 bits (169), Expect = 7e-12
Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 22/185 (11%)
Query: 291 PQQEQEQERE---------RDPQQ-EQERERPVDREPV----DREPVVCHPDLEERLQAW 336
P Q+QE E PQ E+ +E+ + EPV DR+ V P A
Sbjct: 229 PAQDQEDPEEFYVLSETTLAQPQSLERHKEQLLAAEPVRAKLDRQRRVFQPSP----LAS 284
Query: 337 PAELPDEFFELTVDDVRRRLAQLKSER-KRLEEAPLVTKAFREAQIKEKLERYPKVALRV 395
ELP +FF LT ++++R +L+SE +RL + L TKA RE + + L +Y LRV
Sbjct: 285 QFELPGDFFNLTAEEIKRE-QRLRSEAVERL--SVLRTKAMREKEEQRGLRKYNYTLLRV 341
Query: 396 LFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLF 455
PD +LQG F E +G + FVR L + L F L + + + +D L + L
Sbjct: 342 RLPDGCLLQGTFYARERLGAVYGFVREALQSDWLPFELLASGGQKLSEDENLALNECGLV 401
Query: 456 PAALV 460
P+AL+
Sbjct: 402 PSALL 406
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 47.8 bits (112), Expect = 3e-05
Identities = 78/293 (26%), Positives = 125/293 (42%), Gaps = 45/293 (15%)
Query: 257 GPTRPLTSSSAKLPKSLSSPGGPSKPK---KSKSGQDPQQEQEQERERDPQQEQERERPV 313
GPT P +S +LP + + GPS+ + + + Q+ Q+++E ERER ++ ERER +
Sbjct: 117 GPTLPRQNS--QLPAQVQN--GPSQEELEIQRRQLQEQQRQKELERERLERERMERER-L 171
Query: 314 DREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERKRLEEAPLVT 373
+RE ++RE + ER + +L E E + R +L+ + +RLE +
Sbjct: 172 ERERLERERL-------ERERLEQEQLERERQERERQERLERQERLERQ-ERLERQERLD 223
Query: 374 KAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYL 433
+ +E Q +E+LER + Q R + + ++ R + +
Sbjct: 224 RERQERQERERLERLERER-----------QERERQEQLEREQLEWERERRISSAAAPAS 272
Query: 434 FITPPKTVLDDHTQTL--FQANLFPAALVHLGAEEPA--GVYLEPGLLEHA--ISPSAAD 487
TP +VL D + + QA PA E P+ G+ L P + P A
Sbjct: 273 VETPLNSVLGDSSASEPGLQAASQPA-------ETPSQQGIVLGPLAPPPPPPLPPGPAQ 325
Query: 488 VLVARYMSRAAGSPSPLPA--PDPAPKSEPAAEEGALVPPEPIPGTAQPVKRS 538
VA P PLP+ P P P P + VPP P P A P+ S
Sbjct: 326 ASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQ---VPPPPPPPPAPPLPAS 375
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 47.8 bits (112), Expect = 3e-05
Identities = 78/293 (26%), Positives = 125/293 (42%), Gaps = 45/293 (15%)
Query: 257 GPTRPLTSSSAKLPKSLSSPGGPSKPK---KSKSGQDPQQEQEQERERDPQQEQERERPV 313
GPT P +S +LP + + GPS+ + + + Q+ Q+++E ERER ++ ERER +
Sbjct: 117 GPTLPRQNS--QLPAQVQN--GPSQEELEIQRRQLQEQQRQKELERERLERERMERER-L 171
Query: 314 DREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERKRLEEAPLVT 373
+RE ++RE + ER + +L E E + R +L+ + +RLE +
Sbjct: 172 ERERLERERL-------ERERLEQEQLERERQERERQERLERQERLERQ-ERLERQERLD 223
Query: 374 KAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYL 433
+ +E Q +E+LER + Q R + + ++ R + +
Sbjct: 224 RERQERQERERLERLERER-----------QERERQEQLEREQLEWERERRISSAAAPAS 272
Query: 434 FITPPKTVLDDHTQTL--FQANLFPAALVHLGAEEPA--GVYLEPGLLEHA--ISPSAAD 487
TP +VL D + + QA PA E P+ G+ L P + P A
Sbjct: 273 VETPLNSVLGDSSASEPGLQAASQPA-------ETPSQQGIVLGPLAPPPPPPLPPGPAQ 325
Query: 488 VLVARYMSRAAGSPSPLPA--PDPAPKSEPAAEEGALVPPEPIPGTAQPVKRS 538
VA P PLP+ P P P P + VPP P P A P+ S
Sbjct: 326 ASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQ---VPPPPPPPPAPPLPAS 375
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 46.2 bits (108), Expect = 8e-05
Identities = 48/191 (25%), Positives = 77/191 (40%), Gaps = 21/191 (10%)
Query: 176 DPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTS----GPCCEHTQEK 231
+ G+ PG G +A G E+ E S G+ + +T G CE E
Sbjct: 751 ESTGEMPGEEGETAGEG----------ETEEKSGGETQPEGEGETETQGKGEECEDENEA 800
Query: 232 QSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSS-----AKLPKSLSSPGGPSKPKKSK 286
+ + G G T S+ AK + GG S S+
Sbjct: 801 EGKGDNEGEDEGEIHAEDGEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGDSE 860
Query: 287 SGQDPQQEQEQERERDPQQEQERERPVDREPVDREPV-VCHPDLEERLQAWPAELPDEF- 344
++ ++EQE+E E + Q+E+E E + E + EP+ + P+ ++ + LP F
Sbjct: 861 EEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIYLFLLPIVFP 920
Query: 345 FELTVDDVRRR 355
LTV DVRR+
Sbjct: 921 LWLTVPDVRRQ 931
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 45.8 bits (107), Expect = 1e-04
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 256 PGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERER----------DPQQ 305
PGP RPL K + P++S+ ++ + ++E+ER+R DP++
Sbjct: 1166 PGPWRPLVKPGGWREKEKAREESWGPPRESRPSEEREWDREKERDRDNQDREENDKDPER 1225
Query: 306 EQERERPVDREPVDREP 322
E++RER VDRE R P
Sbjct: 1226 ERDRERDVDREDRFRRP 1242
Score = 32.3 bits (72), Expect = 1.2
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 281 KPKKSKSGQDPQQEQEQERERDPQQEQERERPVDREPVDREPV----------VCHPDLE 330
K +K++ + Q+ +E+E+ER Q+ ++ ++ RE +++ + DLE
Sbjct: 603 KVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTELGAKAFKDIDIEDLE 662
Query: 331 ERLQAWPAELPDEFFELTVDDVRRRLAQLKSE------RKRLEEAPLVTKAFREAQIKE 383
E + E E +++ RL + + KRLEE PL+ A+ E +IK+
Sbjct: 663 ELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRIKD 721
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 45.8 bits (107), Expect = 1e-04
Identities = 57/247 (23%), Positives = 90/247 (36%), Gaps = 43/247 (17%)
Query: 75 KLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSHFPQIRECLQHPGGA 134
K+ ++ A++S P + + D +Q S S +E H P L PGG
Sbjct: 40 KMRLLGAAQSLPAP-----LTSRADPEKAVQGSPKSSSAPFEAELHLPPKLRRLYGPGGG 94
Query: 135 TPVCVYTRDEVTGEAALRGTTLQSLGLTGGSA-----TIRFVMKCYDPVGKTPGSLGSSA 189
+ AA + G G + T R G+ P G++A
Sbjct: 95 RLLQGAAAAAAAAAAAAAAAATATAGPRGEAPPPPPPTAR--------PGERPDGAGAAA 146
Query: 190 SAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGGG 249
+A AAA+A L+ + + +SR + +G APFVP
Sbjct: 147 AAAAAAAAAWDTLKISQAPQVSISRSKSYRENG-----------------APFVPPPPAL 189
Query: 250 QRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERERDPQQEQER 309
LGGP G T P + L GGP + G + ++E+ E + +++E
Sbjct: 190 DELGGPGGVTHP--------EERLGVAGGPGSAPAAGGGTGTEDDEEELLEDEEDEDEEE 241
Query: 310 ERPVDRE 316
E D E
Sbjct: 242 ELLEDDE 248
>gi|116734689 socius isoform 3 [Homo sapiens]
Length = 400
Score = 45.1 bits (105), Expect = 2e-04
Identities = 47/172 (27%), Positives = 66/172 (38%), Gaps = 35/172 (20%)
Query: 359 LKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRD 418
L +ER+R +E+P T A + ++ K E + L ++ PD T+GD+R
Sbjct: 258 LAAERERSQESPN-TPAPPLSMLRIKSENGEQAFLLMMQPDN-----------TIGDVRA 305
Query: 419 FVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLE 478
+ +F +F T P T+ D T TL A L P A + L A L+
Sbjct: 306 LLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLK----- 360
Query: 479 HAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPG 530
SP P P P P P+P P G P P PG
Sbjct: 361 --FSP----------------GPCPGPGPGPSPGPGPGPSPGPGPGPSPCPG 394
>gi|116734681 socius isoform 1 [Homo sapiens]
Length = 487
Score = 45.1 bits (105), Expect = 2e-04
Identities = 47/172 (27%), Positives = 66/172 (38%), Gaps = 35/172 (20%)
Query: 359 LKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRD 418
L +ER+R +E+P T A + ++ K E + L ++ PD T+GD+R
Sbjct: 345 LAAERERSQESPN-TPAPPLSMLRIKSENGEQAFLLMMQPDN-----------TIGDVRA 392
Query: 419 FVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLE 478
+ +F +F T P T+ D T TL A L P A + L A L+
Sbjct: 393 LLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLK----- 447
Query: 479 HAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPG 530
SP P P P P P+P P G P P PG
Sbjct: 448 --FSP----------------GPCPGPGPGPSPGPGPGPSPGPGPGPSPCPG 481
>gi|116734679 socius isoform 2 [Homo sapiens]
Length = 520
Score = 45.1 bits (105), Expect = 2e-04
Identities = 47/172 (27%), Positives = 66/172 (38%), Gaps = 35/172 (20%)
Query: 359 LKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRD 418
L +ER+R +E+P T A + ++ K E + L ++ PD T+GD+R
Sbjct: 378 LAAERERSQESPN-TPAPPLSMLRIKSENGEQAFLLMMQPDN-----------TIGDVRA 425
Query: 419 FVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLE 478
+ +F +F T P T+ D T TL A L P A + L A L+
Sbjct: 426 LLAQARVMDASAFEIFSTFPPTLYQDDTLTLQAAGLVPKAALLLRARRAPKSSLK----- 480
Query: 479 HAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPG 530
SP P P P P P+P P G P P PG
Sbjct: 481 --FSP----------------GPCPGPGPGPSPGPGPGPSPGPGPGPSPCPG 514
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 44.7 bits (104), Expect = 2e-04
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 23/152 (15%)
Query: 234 TRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLS----------SPGGPSKPK 283
T P A+P VP + L PGP P +P ++ +PGG P
Sbjct: 814 TGPPTASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPA 873
Query: 284 KSK-------SGQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAW 336
+ + D ++E+E+E E + ++E+E E + E D E + EE
Sbjct: 874 LEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEE---- 929
Query: 337 PAELPDEFFELTVDDVRRRLAQLKSERKRLEE 368
E +EF E + + + E + LEE
Sbjct: 930 --EFEEEFEEEEGELEEEEEEEDEEEEEELEE 959
Score = 31.2 bits (69), Expect = 2.6
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 229 QEKQSTRAPAAAP-FVPFSGGGQRLGGPPG---PTRPLTSSSAKLPKSLSSPGGPSKPKK 284
+E+ + AP AP +P G +R G P P + L P +L K
Sbjct: 1016 EERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDK 1075
Query: 285 SKSGQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEE 331
+ + E+E E E + + QE+E+ D + + + C PD E+
Sbjct: 1076 VQPPPETPAEEEMETETEAEALQEKEQD-DTAAMLADFIDCPPDDEK 1121
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 43.9 bits (102), Expect = 4e-04
Identities = 72/275 (26%), Positives = 109/275 (39%), Gaps = 35/275 (12%)
Query: 122 PQIRECLQHP---GGAT--PVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYD 176
P +R + P GG T P+ TR + G T GL A RF +
Sbjct: 2218 PMVRGGMYRPYASGGITAVPLTSLTRVPMIAPRVPLGPT----GLYRYPAPSRFPIASSV 2273
Query: 177 PVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRA 236
P + P LG A+A A P E+ G +R E T+ P K++ A
Sbjct: 2274 PPAEGPVYLGKPAAAKAPGAGGP---SRPEMPVG-AAREEPLPTTTPAAI----KEAAGA 2325
Query: 237 PAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQE 296
PA AP GQ+ PP P S A LS PG + + Q QQEQ
Sbjct: 2326 PAPAPLA-----GQK---PPADAAPGGGSGA-----LSRPGFEKEEASQEERQRKQQEQL 2372
Query: 297 QERERDPQQEQERERPVDREPVDREPVVCHPDLEER---LQAWPAELPDEFFELTVDDVR 353
+ ER+ + ++ + +E ++RE V EE +Q EL +
Sbjct: 2373 LQLERERVELEKLRQLRLQEELERERVELQRHREEEQLLVQRELQELQTIKHHVLQQQQE 2432
Query: 354 RRLAQLKSERKRLEEAPLVTKAFR--EAQIKEKLE 386
R AQ +R++L + L + + + Q++++LE
Sbjct: 2433 ERQAQFALQREQLAQQRLQLEQIQQLQQQLQQQLE 2467
Score = 30.4 bits (67), Expect = 4.4
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 248 GGQRLGGPPGP----TRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERERDP 303
G Q LG P GP PL++ ++ LP S P + S+ + P QE++
Sbjct: 557 GPQGLGQPSGPLPAKASPLSTKASPLPSKASPQAKPL--RASEPSKTPSSVQEKKTRVPT 614
Query: 304 QQEQERERPVDREPVDREPVV 324
+ E + P + P P V
Sbjct: 615 KAEPMPKPPPETTPTPATPKV 635
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 43.1 bits (100), Expect = 7e-04
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 215 PEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLS 274
PED S + +E + +PA +P + + PP T P ++ P + +
Sbjct: 523 PEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAET-PTDAAVLTSPPAPA 581
Query: 275 SPGGPSKPKKSKSGQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQ 334
P PSKP + ++ E+ R ++++ERE R +R+ + L +
Sbjct: 582 PPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLAREAE 641
Query: 335 AWPAELPDEFFELTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLER 387
A AE E + R + + E++RL++ K EA+ +E+ ER
Sbjct: 642 A-RAEREAEARRREEQEAREKAQAEQEEQERLQK----QKEEAEARSREEAER 689
Score = 31.2 bits (69), Expect = 2.6
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 9/44 (20%)
Query: 495 SRAAGSPSPLPAPDPAP----KSEPAAE---EGALV--PPEPIP 529
S A SP+P PAP P P K +P AE + A++ PP P P
Sbjct: 539 SAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAP 582
Score = 30.0 bits (66), Expect = 5.8
Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 11/206 (5%)
Query: 185 LGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVP 244
LG+ A A + P P S E P A + ++ + P P
Sbjct: 9 LGAGAPPAVVARTPPEPRPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSSKQLPLEP 68
Query: 245 FSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERERDPQ 304
S GQ P P SS AK GP + + P + P
Sbjct: 69 ESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPASD-SPP 127
Query: 305 QEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERK 364
+QE ++ +R + +E EER + A+ + E R QL+ R+
Sbjct: 128 TKQEVKKAGERHKLAKER------REERAKYLAAKKA-VWLEKEEKAKALREKQLQERRR 180
Query: 365 RLEEAPLVT---KAFREAQIKEKLER 387
RLEE L +A E + ++KLE+
Sbjct: 181 RLEEQRLKAEQRRAALEERQRQKLEK 206
>gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 632
Score = 42.7 bits (99), Expect = 9e-04
Identities = 42/154 (27%), Positives = 57/154 (37%), Gaps = 9/154 (5%)
Query: 182 PGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAP 241
P + GS +S L +RG LS P+D T G + + TR ++P
Sbjct: 365 PHTRGSLSSPQDPHTRGSLSSPQDPHTRGSLSSPKDPHTRGSLS--SPQDPHTRGSLSSP 422
Query: 242 FVPFSGGGQRLGGPPGPTRPLTSSSAKLPK---SLSSPGGPSKPKKSKSGQDPQQEQEQE 298
P + G L P P + SS K P SLSSP P + QDP
Sbjct: 423 KDPHTRGS--LSSPQDPHTRGSLSSPKDPHTRGSLSSPKDPHTRRSLSCPQDPHTRGSLS 480
Query: 299 RERDPQQEQERERPVDREPVDREPVVCHPDLEER 332
+DP P ++P R + C D R
Sbjct: 481 SPQDPHTRGSLSSP--KDPHTRRSLSCPQDPHTR 512
Score = 42.4 bits (98), Expect = 0.001
Identities = 42/156 (26%), Positives = 57/156 (36%), Gaps = 9/156 (5%)
Query: 180 KTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAA 239
K P + GS + L +RG LS P+D T G + + TR +
Sbjct: 327 KDPHTRGSLSCPQDPHTRGSLSCPQDPHTRGSLSSPQDPHTRGSLS--SPQDPHTRGSLS 384
Query: 240 APFVPFSGGGQRLGGPPGPTRPLTSSSAKLPK---SLSSPGGPSKPKKSKSGQDPQQEQE 296
+P P + G L P P + SS + P SLSSP P S QDP
Sbjct: 385 SPQDPHTRGS--LSSPKDPHTRGSLSSPQDPHTRGSLSSPKDPHTRGSLSSPQDPHTRGS 442
Query: 297 QERERDPQQEQERERPVDREPVDREPVVCHPDLEER 332
+DP P ++P R + C D R
Sbjct: 443 LSSPKDPHTRGSLSSP--KDPHTRRSLSCPQDPHTR 476
Score = 38.5 bits (88), Expect = 0.016
Identities = 52/189 (27%), Positives = 70/189 (37%), Gaps = 11/189 (5%)
Query: 130 HPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVG-KTPGSLGSS 188
H G T V +R G + G LQ++ + T++ + P T GSL SS
Sbjct: 255 HQQGVTGQAVVSRPLDAGWPWMDGPPLQAVFAPAPNHTLQRPSEQTCPQDLHTRGSL-SS 313
Query: 189 ASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGG 248
S P + +RG LS P+D T G + TR ++P P + G
Sbjct: 314 PQDPHTRGSLSSPKDPH--TRGSLSCPQDPHTRGSLS--CPQDPHTRGSLSSPQDPHTRG 369
Query: 249 GQRLGGPPGPTRPLTSSSAKLPK---SLSSPGGPSKPKKSKSGQDPQQEQEQERERDPQQ 305
L P P + SS + P SLSSP P S QDP +DP
Sbjct: 370 S--LSSPQDPHTRGSLSSPQDPHTRGSLSSPKDPHTRGSLSSPQDPHTRGSLSSPKDPHT 427
Query: 306 EQERERPVD 314
P D
Sbjct: 428 RGSLSSPQD 436
Score = 37.7 bits (86), Expect = 0.028
Identities = 41/154 (26%), Positives = 56/154 (36%), Gaps = 9/154 (5%)
Query: 182 PGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAP 241
P + GS +S L +RG LS P+D T G + + TR ++P
Sbjct: 389 PHTRGSLSSPKDPHTRGSLSSPQDPHTRGSLSSPKDPHTRGSLS--SPQDPHTRGSLSSP 446
Query: 242 FVPFSGGGQRLGGPPGPTRPLTSSSAKLPK---SLSSPGGPSKPKKSKSGQDPQQEQEQE 298
P + G L P P + S + P SLSSP P S +DP +
Sbjct: 447 KDPHTRGS--LSSPKDPHTRRSLSCPQDPHTRGSLSSPQDPHTRGSLSSPKDPHTRRSLS 504
Query: 299 RERDPQQEQERERPVDREPVDREPVVCHPDLEER 332
+DP P D P R + C D R
Sbjct: 505 CPQDPHTRGSLSCPQD--PHTRGSLSCPQDPHTR 536
Score = 35.0 bits (79), Expect = 0.18
Identities = 41/156 (26%), Positives = 53/156 (33%), Gaps = 15/156 (9%)
Query: 182 PGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSG----PCCEHTQEKQS---- 233
P + GS +S L +RG LS P+D T G P HT+ S
Sbjct: 413 PHTRGSLSSPKDPHTRGSLSSPQDPHTRGSLSSPKDPHTRGSLSSPKDPHTRRSLSCPQD 472
Query: 234 --TRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPK---SLSSPGGPSKPKKSKSG 288
TR ++P P + G L P P + S + P SLS P P
Sbjct: 473 PHTRGSLSSPQDPHTRGS--LSSPKDPHTRRSLSCPQDPHTRGSLSCPQDPHTRGSLSCP 530
Query: 289 QDPQQEQEQERERDPQQEQERERPVDREPVDREPVV 324
QDP +D P D R P+V
Sbjct: 531 QDPHTRGSLSSPQDLHTRGSLSSPKDPHTPPRSPLV 566
Score = 34.7 bits (78), Expect = 0.23
Identities = 39/119 (32%), Positives = 47/119 (39%), Gaps = 15/119 (12%)
Query: 180 KTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSG----PCCEHTQEKQS-- 233
K P + GS +S L +RG LS P+D T G P HT+ S
Sbjct: 447 KDPHTRGSLSSPKDPHTRRSLSCPQDPHTRGSLSSPQDPHTRGSLSSPKDPHTRRSLSCP 506
Query: 234 ----TRAPAAAPFVPFSGGGQRLGGPPGP-TRPLTSSSAKLPK--SLSSPGGPSKPKKS 285
TR + P P + G L P P TR SS L SLSSP P P +S
Sbjct: 507 QDPHTRGSLSCPQDPHTRGS--LSCPQDPHTRGSLSSPQDLHTRGSLSSPKDPHTPPRS 563
Score = 30.4 bits (67), Expect = 4.4
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 208 SRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGGGQR 251
+RG LS P+D T G R+P AP + S G QR
Sbjct: 535 TRGSLSSPQDLHTRGSLSSPKDPHTPPRSPLVAPGLAISDGYQR 578
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 42.4 bits (98), Expect = 0.001
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 18/91 (19%)
Query: 246 SGGGQRLGGPPGPTRPLTSSSAK-----------LPKSLSSPGGPSKP----KKSKSGQD 290
S G + GG P P P+ +SA L SL SP G S P K+++ +
Sbjct: 667 SRGSRAAGGAPSPPPPVRRASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSKETRKQEK 726
Query: 291 PQQEQEQERERDPQQEQERERPVDREPVDRE 321
+Q+QE+ER++ QE+ERE+ ++ +RE
Sbjct: 727 ERQKQEKERQK---QEKEREKERQKQEKERE 754
Score = 39.7 bits (91), Expect = 0.007
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 231 KQSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQD 290
++++ PA P V G L P G + PL SS + K ++ + +
Sbjct: 684 RRASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSKETRKQ--------EKERQKQEKER 735
Query: 291 PQQEQEQERERDPQQEQERERPVDREPVDRE 321
+QE+E+E+ER Q+++ ++ +RE ++E
Sbjct: 736 QKQEKEREKERQKQEKEREKQEKEREKQEKE 766
Score = 37.4 bits (85), Expect = 0.036
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 230 EKQSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSL--SSPGGPSKPKKSKS 287
+ + +RA AP P G PGP LP S+P G SK + +
Sbjct: 666 KSRGSRAAGGAPSPPPPVRRASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSKETRKQE 725
Query: 288 GQDPQQEQEQERERDPQQEQERERPVDREPVDRE 321
+ +QE+E++++ ++++ +++ +RE ++E
Sbjct: 726 KERQKQEKERQKQEKEREKERQKQEKEREKQEKE 759
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 41.2 bits (95), Expect = 0.003
Identities = 71/311 (22%), Positives = 112/311 (36%), Gaps = 59/311 (18%)
Query: 152 RGTTLQSLGLTGGSATIRFVMKCYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGD 211
+G Q G +GG GKTPG+ ++ +G A G G
Sbjct: 199 KGVRAQQRGGSGGEGASPSPSS--SSAGKTPGTGSRNSGSGVAG---------GGSGGGG 247
Query: 212 LSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGGGQR-----LGGPPGPTRPLTSSS 266
E S H +++++ A AAA +GGG + GPP L +S
Sbjct: 248 SYWKEGCLQSELIQFHLKKERAAAAAAAAQMHAKNGGGSSSRSSPVSGPPAVCETLAVAS 307
Query: 267 AKLPKSLSSPGGPSKPKKSKSG------------QDPQQEQEQERERDPQQEQERERPVD 314
A P + ++ G + S SG PQQ QEQE ++ ++ E
Sbjct: 308 AS-PMAAAAEGPQQSAEGSASGGGMQAAAPPSSQPHPQQLQEQEEMQEEMEKLREENETL 366
Query: 315 REPVDREPVVCHPDLEERLQAWPAELPDEFFE---LTVDDVRRRLAQL------------ 359
+ +D L+ E+ D FFE + ++R L +
Sbjct: 367 KNEID------------ELRTEMDEMRDTFFEEDACQLQEMRHELERANKNCRILQYRLR 414
Query: 360 KSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDF 419
K+ERKRL A + ++ LE+ KVA V + L+ T D +
Sbjct: 415 KAERKRLRYA---QTGEIDGELLRSLEQDLKVAKDVSVRLHHELENVEEKRTTTEDENEK 471
Query: 420 VRSHLGNPELS 430
+R L E++
Sbjct: 472 LRQQLIEVEIA 482
>gi|20149635 p47 protein isoform a [Homo sapiens]
Length = 370
Score = 41.2 bits (95), Expect = 0.003
Identities = 59/228 (25%), Positives = 83/228 (36%), Gaps = 21/228 (9%)
Query: 244 PFSGGGQRLGGPP--------GPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQ 295
PF+GGG RLG P G R +S + L G + +S QDP Q
Sbjct: 149 PFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQ 208
Query: 296 EQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVR-- 353
E R + E R V+ D+E+ + F T + +
Sbjct: 209 FLESIRRGEVPAELRRLAHGGQVNL-------DMEDHRDEDFVKPKGAFKAFTGEGQKLG 261
Query: 354 RRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETV 413
Q+ S ++A KA I E P +++ D L F S +
Sbjct: 262 STAPQVLSTSSPAQQAENEAKASSSILIDES---EPTTNIQIRLADGGRLVQKFNHSHRI 318
Query: 414 GDLRDF-VRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALV 460
D+R F V + SF L T P L D +QTL +ANL A +V
Sbjct: 319 SDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLLNAVIV 366
>gi|33286434 p47 protein isoform c [Homo sapiens]
Length = 259
Score = 41.2 bits (95), Expect = 0.003
Identities = 59/228 (25%), Positives = 83/228 (36%), Gaps = 21/228 (9%)
Query: 244 PFSGGGQRLGGPP--------GPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQ 295
PF+GGG RLG P G R +S + L G + +S QDP Q
Sbjct: 38 PFAGGGYRLGAAPEEESAYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQ 97
Query: 296 EQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVR-- 353
E R + E R V+ D+E+ + F T + +
Sbjct: 98 FLESIRRGEVPAELRRLAHGGQVNL-------DMEDHRDEDFVKPKGAFKAFTGEGQKLG 150
Query: 354 RRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETV 413
Q+ S ++A KA I E P +++ D L F S +
Sbjct: 151 STAPQVLSTSSPAQQAENEAKASSSILIDES---EPTTNIQIRLADGGRLVQKFNHSHRI 207
Query: 414 GDLRDF-VRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALV 460
D+R F V + SF L T P L D +QTL +ANL A +V
Sbjct: 208 SDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLLNAVIV 255
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 40.8 bits (94), Expect = 0.003
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 236 APAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKS------KSGQ 289
APA+AP + + P + P SS+ S+ + G + P+++ K
Sbjct: 432 APASAPAPASAPAPAPVPTPAMVSAP--SSTVNASASVKTSAGTTDPEEATRLLAEKRRL 489
Query: 290 DPQQEQEQERERDPQQEQERERPVD-REPVDREPVVCHPDLEERLQAWPAELPDEFFELT 348
+Q +++ERER Q+E ER++ + + V E + RL+A A +E +
Sbjct: 490 AREQREKEERERREQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQLQRQ 549
Query: 349 VDD--VRRRLAQLKSERKRLEEAPLVTKAFREAQIKEK 384
++ +R R +++R++ EEA + +A R Q +EK
Sbjct: 550 AEERALREREEAERAQRQKEEEARVREEAERVRQEREK 587
Score = 29.3 bits (64), Expect = 9.8
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 478 EHAISPSAADVLVARYMSRA-AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
E + P+A + A + A A +P+P P P PA S P++ A + GT P
Sbjct: 419 EPEVGPAAPAMAPAPASAPAPASAPAPAPVPTPAMVSAPSSTVNASASVKTSAGTTDP 476
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 40.0 bits (92), Expect = 0.006
Identities = 71/305 (23%), Positives = 116/305 (38%), Gaps = 50/305 (16%)
Query: 258 PTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERERDPQQEQERERPVDREP 317
PT L S + P+ + S G PSKP P +E E Q E P R
Sbjct: 607 PTHSLDYSEGQFPRRVPSMGPPSKP--------PDEEHRLEDAETESQSAVSETPQKRSD 658
Query: 318 VDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERKRLEEAPL------ 371
++ VV D++ QA + E T++D+R ++A+L+ + L+
Sbjct: 659 AVQKEVV---DMKSEGQATVIQQ----LEQTIEDLRTKIAELERQYPALDTEVASGHQGL 711
Query: 372 ---VTKA----FREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHL 424
VT + +++EK R+ ++ +G V L
Sbjct: 712 ENGVTASGDVCLEALRLEEKEVRHHRILEAKSIQTSPTEEGGVLTLPPVDGLPGRPPCPP 771
Query: 425 G---NPELSF----YLFITPPK--TVLDDH--TQTLFQANLFPAALVHLGAEEPAGVYLE 473
G P+ F L ++P + LD H TQ++ Q P+ L G +P +
Sbjct: 772 GAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPPSLLWSAGQGQPGS---Q 828
Query: 474 PGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGAL----VPPEPIP 529
P H+IS + +S A + +P+P P P +E ++ L PP P+P
Sbjct: 829 P---PHSIS-TEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLP 884
Query: 530 GTAQP 534
G P
Sbjct: 885 GMTVP 889
Score = 29.6 bits (65), Expect = 7.5
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG A P
Sbjct: 918 AGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIP 954
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG P
Sbjct: 973 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1009
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG P
Sbjct: 984 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1020
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG P
Sbjct: 995 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1031
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG P
Sbjct: 1006 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1042
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG P
Sbjct: 1017 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1053
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG P
Sbjct: 1028 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1064
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG P
Sbjct: 1039 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1075
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG P
Sbjct: 1050 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1086
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG P
Sbjct: 1061 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1097
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 498 AGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQP 534
AG P P P P P + PP P+PG P
Sbjct: 1072 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIP 1108
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 40.0 bits (92), Expect = 0.006
Identities = 38/120 (31%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 179 GKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADT--SGPCCEHTQEKQSTRA 236
G TP S +S A A+ L L G+ SR RP D CC T +
Sbjct: 42 GTTPASPTASGLAPFASPRHGLALPEGDGSRDPPDRPRSPDPVDGTSCCSTTS---TICT 98
Query: 237 PAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQE 296
AAAP VP G P P S S P S SSP S S G + E
Sbjct: 99 VAAAPVVPAVSTSSAAGVAPNPA---GSGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPE 155
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 40.0 bits (92), Expect = 0.006
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 231 KQSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTS-SSAKLPK--SLSSPGGPSKPKKSKS 287
+QS R+ + G P +P S ++ P+ + + P++ ++
Sbjct: 554 RQSRRSTQGVTLTDLKEAEKAAGKAPESEKPAQSLDPSRRPRVPGVENSDSPAQRAEAPD 613
Query: 288 GQDPQQEQEQERERDPQQEQERERPVDREPVDR--EPVVCHPDLEERLQAWPAEL---PD 342
GQ P + +E + ++ + + EP DR E R Q W +L P+
Sbjct: 614 GQGPGPQAAREHRKVGKEWRGPAEGEEAEPADRSQESSTLEGGPSARRQRWQRDLNPEPE 673
Query: 343 EFFELTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLER 387
E R A+L+ E +RL EA L R AQ+K +LER
Sbjct: 674 PESEEPDGGFRTLYAELRRENERLREA-LTETTLRLAQLKVELER 717
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 39.7 bits (91), Expect = 0.007
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 177 PVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRA 236
P G++P S SS+SA + +S+P P RGD +R E A GP H ++S+
Sbjct: 148 PGGRSPDSAPSSSSASSSLSSSPQPPP-----RGDRARDEGARRQGPGA-HLCHQKSSSL 201
Query: 237 PAAAPFVPFSGGGQRLGGPPGPTRPLTS-SSAKLPKSLSSPGGPSK 281
P A Q L PP P P S + ++ P++ G K
Sbjct: 202 PGTACL------EQLLEPPPPPAEPARSPAESRAPETGEEHGSSQK 241
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 39.3 bits (90), Expect = 0.010
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 264 SSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERERDPQQEQERERPVDRE------- 316
SS +S S + ++ + ++ ++E+E+ERER+ ++E+ERER +RE
Sbjct: 374 SSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDR 433
Query: 317 PVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERKRLEEAPLVTKAF 376
D E LE +L+ A + + + R++ + + E +R EE A
Sbjct: 434 EEDEEDAYERRKLERKLREKEAAYQERLKNWEIRE-RKKTREYEKEAER-EEERRREMAK 491
Query: 377 REAQIKEKLERY 388
++KE LE Y
Sbjct: 492 EAKRLKEFLEDY 503
Score = 37.4 bits (85), Expect = 0.036
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 17/123 (13%)
Query: 274 SSPGGPSKPKKSKSGQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERL 333
SS + + + +D ++E+E+ERER+ ++E+ERER +RE RE ER
Sbjct: 374 SSDRNKDRSRSREKSRDRERERERERERERERERERERERERE---RE--------RERE 422
Query: 334 QAWPAELPDEFFELTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKE--KLERYPKV 391
+ + + E D RR K ERK E+ + + +I+E K Y K
Sbjct: 423 REREKDKKRDREEDEEDAYERR----KLERKLREKEAAYQERLKNWEIRERKKTREYEKE 478
Query: 392 ALR 394
A R
Sbjct: 479 AER 481
Score = 34.7 bits (78), Expect = 0.23
Identities = 13/34 (38%), Positives = 27/34 (79%)
Query: 283 KKSKSGQDPQQEQEQERERDPQQEQERERPVDRE 316
++ + ++ ++E+E+ERER+ ++E+ERER DR+
Sbjct: 317 ERERERREREREREREREREKEKERERERERDRD 350
Score = 33.1 bits (74), Expect = 0.68
Identities = 12/34 (35%), Positives = 27/34 (79%)
Query: 283 KKSKSGQDPQQEQEQERERDPQQEQERERPVDRE 316
++ + ++ ++E+E+ERE++ ++E+ERER DR+
Sbjct: 319 ERERREREREREREREREKEKERERERERDRDRD 352
Score = 31.6 bits (70), Expect = 2.0
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 281 KPKKSKSGQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAEL 340
K ++ + + ++ + +ERER+ ++E+ERE+ +RE +RE +ER +
Sbjct: 307 KERRERERERERERERREREREREREREREKEKERER-ERERDRDRDRTKERDR------ 359
Query: 341 PDEFFELTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLER 387
D E D R R + +R R E + RE + + + ER
Sbjct: 360 -DRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERER 405
Score = 29.6 bits (65), Expect = 7.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 283 KKSKSGQDPQQEQEQERERDPQQEQERERPVDREPVDRE 321
+K K ++ Q+ +++ RER+ ++E+ERER +RE
Sbjct: 294 EKGKKEKERQEIEKERRERERERERERERRERERERERE 332
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 39.3 bits (90), Expect = 0.010
Identities = 15/40 (37%), Positives = 31/40 (77%)
Query: 277 GGPSKPKKSKSGQDPQQEQEQERERDPQQEQERERPVDRE 316
GG + K+++ +D ++E++++RER+ Q+++ER+R DRE
Sbjct: 118 GGRERDKQTERERDRERERQRQRERERQRQRERKRETDRE 157
Score = 34.7 bits (78), Expect = 0.23
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 283 KKSKSGQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPD 342
+K +D Q E+E++RER+ Q+++ERER RE + + Q W AE +
Sbjct: 116 RKGGRERDKQTERERDRERERQRQRERERQRQRER--------KRETDRERQRW-AEREE 166
Query: 343 EFFELTVDDVRRRLAQLKSERKR 365
E + + R + K E++R
Sbjct: 167 RKKERKKERKKERKEKKKEEKRR 189
Score = 34.3 bits (77), Expect = 0.31
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 281 KPKKSKSGQDPQQEQEQERERDPQQEQERERPVDRE---PVDREPVVCHPDLEERLQAWP 337
K + + ++ + E+E ER+R+ Q+++ER+R DRE DRE ER +
Sbjct: 60 KERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGG 119
Query: 338 AELPDEFFELTVDDVRRRLAQLKSERKRLEEAPLVTK------AFREAQIKEKLERYPK 390
E D+ E D R R Q + ER+R E T A RE + KE+ + K
Sbjct: 120 RE-RDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKK 177
Score = 29.6 bits (65), Expect = 7.5
Identities = 10/36 (27%), Positives = 26/36 (72%)
Query: 281 KPKKSKSGQDPQQEQEQERERDPQQEQERERPVDRE 316
+ + ++ ++ ++E+++ER+R Q+E+E ER +R+
Sbjct: 44 RERDRQTDREKERERQKERDRQRQRERETERETERQ 79
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 39.3 bits (90), Expect = 0.010
Identities = 45/182 (24%), Positives = 69/182 (37%), Gaps = 21/182 (11%)
Query: 187 SSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCC--------EHTQ--EKQSTRA 236
++A+A +A+S+ L S S S+ +D + P HT +++TR
Sbjct: 331 TAATASSSASSSSLSSSSSSSSSSSSSQFRSSDANYPAYYESWNRYQRHTSYPPRRATRE 390
Query: 237 -PAAAPFVPFSGGGQRLGG------PPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQ 289
P APF +R PP P+RP T + P S + P P +P G
Sbjct: 391 EPPGAPFA--ENTAERFPPSYTSYLPPEPSRP-TDQDYRPPASEAPPPEPPEPGGGGGGG 447
Query: 290 DPQQEQEQERERD-PQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELT 348
P E+E+ R P P + P H L+ R++ E +F L
Sbjct: 448 GPSPEREEVRTSPRPASPARSGSPAPETTNESVPFAQHSSLDSRIEMLLKEQRSKFSFLA 507
Query: 349 VD 350
D
Sbjct: 508 SD 509
Score = 30.4 bits (67), Expect = 4.4
Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 21/168 (12%)
Query: 208 SRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGGGQRLG--------GPPGPT 259
S+ + ++P E +EK + P V ++ G G G G
Sbjct: 829 SKEEKAKPFQNAAKQQAKEEDKEKTKLKEPGLLSLVDWAKSGGTTGIEAFAFGSGLRGAL 888
Query: 260 R-PLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE---------RDPQQEQER 309
R P K P +S +P+ S ++ + + EQE+E + P++++ER
Sbjct: 889 RLPSFKVKRKEPSEISEASEEKRPRPSTPAEEDEDDPEQEKEAGEPGRPGTKPPKRDEER 948
Query: 310 ERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLA 357
+ + R+ + EE Q +E +E E +D R A
Sbjct: 949 GKTQGKH---RKSFALDSEGEEASQESSSEKDEEDDEEDEEDEDREEA 993
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 39.3 bits (90), Expect = 0.010
Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 30/129 (23%)
Query: 223 PCCEHT-------------QEKQSTRAPAA---APFVPFS-GGGQRLGGPPGPTRPLTSS 265
P C HT EKQ PAA AP P S G LG PG L S+
Sbjct: 1576 PGCRHTVVGMSQMDSHKRKHEKQERGEPAAEGPAPGPPISLDGSLSLGAEPGSLLFLQSA 1635
Query: 266 SAKLPKSLSSPGGPSKP-------------KKSKSGQDPQQEQEQERERDPQQEQERERP 312
+A L +L G P P + +G+ Q+++E+E E ++ ++ E
Sbjct: 1636 AAGLGLALGDAGDPGPPDAAAPGPREGAAAAAAAAGESSQEDEEEELELPEEEAEDDEDE 1695
Query: 313 VDREPVDRE 321
D E D E
Sbjct: 1696 DDDEDDDDE 1704
>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
sapiens]
Length = 1782
Score = 39.3 bits (90), Expect = 0.010
Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 39/209 (18%)
Query: 188 SASAGQAAASAPLPLESGELSRGDLSRPED-ADTSGP---------CCEHTQEKQSTRAP 237
S AG+AA+ P +S E L R + A+ S P C E +EKQ
Sbjct: 219 SLGAGEAASKESEPKQSTEKPEETLKREQSHAEISPPAESGQAVEECKEEGEEKQEKEPS 278
Query: 238 AAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQ 297
+A PT P+TS + K + G KK+ S + P++++ +
Sbjct: 279 KSAE---------------SPTSPVTSETGSTFKKFFTQGWAGWRKKT-SFRKPKEDEVE 322
Query: 298 ERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLA 357
E+ +QE E+ VD E D + V L QA P E + E + ++
Sbjct: 323 ASEKKKEQEPEK---VDTEE-DGKAEVASEKLTASEQAHPQEPAESAHEPRLSAEYEKV- 377
Query: 358 QLKSERK--------RLEEAPLVTKAFRE 378
+L SE + + APL T+ F E
Sbjct: 378 ELPSEEQVSGSQGPSEEKPAPLATEVFDE 406
>gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo
sapiens]
Length = 1684
Score = 39.3 bits (90), Expect = 0.010
Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 39/209 (18%)
Query: 188 SASAGQAAASAPLPLESGELSRGDLSRPED-ADTSGP---------CCEHTQEKQSTRAP 237
S AG+AA+ P +S E L R + A+ S P C E +EKQ
Sbjct: 121 SLGAGEAASKESEPKQSTEKPEETLKREQSHAEISPPAESGQAVEECKEEGEEKQEKEPS 180
Query: 238 AAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQ 297
+A PT P+TS + K + G KK+ S + P++++ +
Sbjct: 181 KSAE---------------SPTSPVTSETGSTFKKFFTQGWAGWRKKT-SFRKPKEDEVE 224
Query: 298 ERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLA 357
E+ +QE E+ VD E D + V L QA P E + E + ++
Sbjct: 225 ASEKKKEQEPEK---VDTEE-DGKAEVASEKLTASEQAHPQEPAESAHEPRLSAEYEKV- 279
Query: 358 QLKSERK--------RLEEAPLVTKAFRE 378
+L SE + + APL T+ F E
Sbjct: 280 ELPSEEQVSGSQGPSEEKPAPLATEVFDE 308
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 39.3 bits (90), Expect = 0.010
Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 12/141 (8%)
Query: 177 PVGKTPGSLGSSASAGQAAASAP-----LPLESGELSRGDLSRPEDADTSGPCCEHTQEK 231
P GK G + Q P P + G +G P GP + +
Sbjct: 114 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP---PPPGKPQGPPPQGDNKS 170
Query: 232 QSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDP 291
+S+R+P P P GG + GPP P P+ + P GP P K + G P
Sbjct: 171 RSSRSPPGKPQGPPPQGGNQPQGPPPPP---GKPQGPPPQGGNKPQGPPPPGKPQ-GPPP 226
Query: 292 QQEQEQERERDPQQEQERERP 312
Q + + + R P + + P
Sbjct: 227 QGDNKSQSARSPPGKPQGPPP 247
Score = 37.4 bits (85), Expect = 0.036
Identities = 35/122 (28%), Positives = 45/122 (36%), Gaps = 8/122 (6%)
Query: 177 PVGKTPGS--LGSSASAGQAAASAPL--PLESGELSRGDLSRPEDADTSGPCCEHTQEKQ 232
P GK G G + G P P + G SR S P GP + + Q
Sbjct: 259 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPP--GKPQGPPPQGGNQPQ 316
Query: 233 STRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPK--KSKSGQD 290
P P P GG + GPP P +P KS S+ P KP+ + G +
Sbjct: 317 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNN 376
Query: 291 PQ 292
PQ
Sbjct: 377 PQ 378
Score = 37.0 bits (84), Expect = 0.047
Identities = 34/141 (24%), Positives = 48/141 (34%), Gaps = 13/141 (9%)
Query: 177 PVGKTPGSLGSSASAGQAAASAP-----LPLESGELSRGDLSRPEDADTSGPCCEHTQEK 231
P GK G + Q P P + G +G P GP + + +
Sbjct: 53 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP---PPPGKPQGPPPQGDKSR 109
Query: 232 QSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDP 291
P P GG Q G PP P +P P+ + P GP P K + G P
Sbjct: 110 SPRSPPGKPQGPPPQGGNQPQGPPPPPGKP----QGPPPQGGNKPQGPPPPGKPQ-GPPP 164
Query: 292 QQEQEQERERDPQQEQERERP 312
Q + + R P + + P
Sbjct: 165 QGDNKSRSSRSPPGKPQGPPP 185
Score = 36.6 bits (83), Expect = 0.062
Identities = 37/154 (24%), Positives = 54/154 (35%), Gaps = 16/154 (10%)
Query: 177 PVGKTPGSLGSSASAGQAAASAP-----LPLESGELSRGDLSRPEDADTSGPCCEHTQEK 231
P GK G + Q P P + G +G P GP + +
Sbjct: 238 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP---PPPGKPQGPPPQGGSKS 294
Query: 232 QSTRAPAAAPF-VPFSGGGQRLGGPPGPTRPL--TSSSAKLPKSLSSPGGPSKP-----K 283
+S+R+P P P GG Q G PP P +P P+ PG P P
Sbjct: 295 RSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGS 354
Query: 284 KSKSGQDPQQEQEQERERDPQQEQERERPVDREP 317
KS+S + P + + +++ Q P P
Sbjct: 355 KSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNP 388
Score = 34.3 bits (77), Expect = 0.31
Identities = 33/121 (27%), Positives = 44/121 (36%), Gaps = 6/121 (4%)
Query: 177 PVGKTPGS--LGSSASAGQAAASAPL-PLESGELSRGDLSRPEDADTSGPCCEHTQEKQS 233
P GK G G + G P P G+ ++ +R GP + + Q
Sbjct: 197 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD-NKSQSARSPPGKPQGPPPQGGNQPQG 255
Query: 234 TRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPK--KSKSGQDP 291
P P P GG + GPP P +P KS SS P KP+ + G P
Sbjct: 256 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQP 315
Query: 292 Q 292
Q
Sbjct: 316 Q 316
Score = 32.3 bits (72), Expect = 1.2
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 198 APLPLESGELSRGDLSRPED-----ADTSGPCCEHTQEKQSTRAPAAAPF-VPFSGGGQR 251
A L L S + D+S+ E + G + + Q +P P P GG Q
Sbjct: 9 ALLALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQP 68
Query: 252 LGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERERDPQQEQ 307
G PP P +P P+ + P GP P K + G PQ ++ + P + Q
Sbjct: 69 QGPPPPPGKP----QGPPPQGGNKPQGPPPPGKPQ-GPPPQGDKSRSPRSPPGKPQ 119
Score = 32.0 bits (71), Expect = 1.5
Identities = 38/152 (25%), Positives = 49/152 (32%), Gaps = 23/152 (15%)
Query: 177 PVGKTPGS--LGSSASAGQAAASAPL--PLESGELSRGDLSRPEDADTSGPCCEHTQEKQ 232
P GK G G + G P P + SR S P GP + + Q
Sbjct: 135 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPP--GKPQGPPPQGGNQPQ 192
Query: 233 STRAPAAAPFVPFSGGGQRLGGPPGPTRPL--------TSSSAKLPKSL---------SS 275
P P P GG + GPP P +P S SA+ P +
Sbjct: 193 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQ 252
Query: 276 PGGPSKPKKSKSGQDPQQEQEQERERDPQQEQ 307
P GP P G PQ + + P + Q
Sbjct: 253 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ 284
Score = 29.3 bits (64), Expect = 9.8
Identities = 28/121 (23%), Positives = 40/121 (33%), Gaps = 9/121 (7%)
Query: 177 PVGKTPGSLGSSASAGQAAASAP-----LPLESGELSRGDLSRPEDADTSGPCCEHTQEK 231
P GK G + Q P P + G +G P GP + +
Sbjct: 300 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP---PPPGKPQGPPPQGGSKS 356
Query: 232 QSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDP 291
+S R+P P P G GPP P + P + G P P+ + + P
Sbjct: 357 RSARSPPGKPQGPPQQEGNNPQGPPPPAGG-NPQQPQAPPAGQPQGPPRPPQGGRPSRPP 415
Query: 292 Q 292
Q
Sbjct: 416 Q 416
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,375,466
Number of Sequences: 37866
Number of extensions: 1581053
Number of successful extensions: 20141
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 711
Number of HSP's that attempted gapping in prelim test: 13057
Number of HSP's gapped (non-prelim): 5633
length of query: 553
length of database: 18,247,518
effective HSP length: 107
effective length of query: 446
effective length of database: 14,195,856
effective search space: 6331351776
effective search space used: 6331351776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.