NSFL1C 26078

Name: NSFL1C	Sequence: fasta or formatted (259aa)		NCBI GI: 33286434
Description: p47 protein isoform c		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [370aa] p47 protein isoform a alt prot [339aa] p47 protein isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 27 2 C cysteine 0.0 0 0 D aspartate 4.6 12 1 E glutamate 8.1 21 3 F phenylalanine 3.9 10 1 G glycine 7.3 19 3 H histidine 2.7 7 1 I isoleucine 3.9 10 1 K lysine 6.9 18 1 L leucine 8.1 21 2 M methionine 2.3 6 1 N asparagine 3.5 9 1 P proline 4.6 12 1 Q glutamine 5.0 13 2 R arginine 7.7 20 2 S serine 8.5 22 3 T threonine 5.0 13 2 V valine 5.8 15 2 W tryptophan 0.4 1 1 Y tyrosine 1.2 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 p47 protein isoform c NSFL1C 0.950 p47 protein isoform a NSFL1C 0.787 p47 protein isoform b UBXN2B 0.542 UBX domain protein 2B UBXN2A 0.253 UBX domain containing 4 UBXN11 0.035 socius isoform 3 UBXN11 0.035 socius isoform 1 UBXN11 0.035 socius isoform 2 ASPSCR1 0.033 alveolar soft part sarcoma chromosome region, candid... EGFR 0.014 epidermal growth factor receptor isoform a precursor... MYO7B 0.012 myosin VIIB VPS16 0.010 vacuolar protein sorting 16 isoform 1 USP9Y 0.010 ubiquitin specific protease 9, Y-linked ITIH3 0.010 inter-alpha (globulin) inhibitor H3 preproprotein [... VPS16 0.010 vacuolar protein sorting 16 isoform 3 ZBTB40 0.010 zinc finger and BTB domain containing 40 ZBTB40 0.010 zinc finger and BTB domain containing 40 UBXN1 0.010 UBX domain protein 1 INO80B 0.008 high mobility group AT-hook 1-like 4 TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform c ... CECR2 0.006 cat eye syndrome chromosome region, candidate 2 [Ho... MLLT4 0.006 myeloid/lymphoid or mixed-lineage leukemia (trithora... MLLT4 0.006 myeloid/lymphoid or mixed-lineage leukemia (trithora... MLLT4 0.006 myeloid/lymphoid or mixed-lineage leukemia (trithora... TRIM3 0.006 tripartite motif-containing 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.