Guide to the Human Genome
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Name: CEP63 Sequence: fasta or formatted (541aa) NCBI GI: 109255239
Description:

centrosomal protein 63 isoform b

Referenced in:

Centrosome

Other entries for this name:
alt prot [495aa] centrosomal protein 63 isoform c
alt prot [475aa] centrosomal protein 63 isoform d
alt prot [703aa] centrosomal protein 63 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         31           2
 C cysteine            1.3          7           1
 D aspartate           2.6         14           1
 E glutamate          16.5         89           4
 F phenylalanine       1.1          6           1
 G glycine             3.1         17           3
 H histidine           3.9         21           2
 I isoleucine          4.8         26           2
 K lysine              9.6         52           2
 L leucine            13.1         71           2
 M methionine          3.1         17           1
 N asparagine          2.4         13           2
 P proline             0.6          3           1
 Q glutamine           8.7         47           3
 R arginine            5.9         32           1
 S serine              7.9         43           3
 T threonine           4.4         24           1
 V valine              3.5         19           1
 W tryptophan          0.4          2           1
 Y tyrosine            1.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centrosomal protein 63 isoform b 
CEP63                 0.901   centrosomal protein 63 isoform a 
CEP63                 0.890   centrosomal protein 63 isoform c 
CEP63                 0.791   centrosomal protein 63 isoform d 
CCDC67                0.182   coiled-coil domain containing 67 
LOC283767             0.076   golgi autoantigen, golgin subfamily a-like 
CEP110                0.074   centrosomal protein 110kDa 
FILIP1L               0.071   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.071   filamin A interacting protein 1-like isoform 1 [Hom...
GOLGA4                0.068   golgi autoantigen, golgin subfamily a, 4 
MYH9                  0.068   myosin, heavy polypeptide 9, non-muscle 
NUMA1                 0.068   nuclear mitotic apparatus protein 1 
GOLGA3                0.068   Golgi autoantigen, golgin subfamily a, 3 
MYH13                 0.067   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH1                  0.066   myosin, heavy chain 1, skeletal muscle, adult [Homo...
EEA1                  0.066   early endosome antigen 1, 162kD 
MYH4                  0.066   myosin, heavy polypeptide 4, skeletal muscle 
CCDC88A               0.065   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.065   coiled-coil domain containing 88A isoform 1 
LOC440243             0.064   PREDICTED: Putative golgin subfamily A member 6-lik...
CCDC18                0.064   sarcoma antigen NY-SAR-41 
MYH2                  0.063   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.063   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH7                  0.063   myosin, heavy chain 7, cardiac muscle, beta 
CGNL1                 0.063   cingulin-like 1 
CEP250                0.062   centrosomal protein 2 
SYCP1                 0.062   synaptonemal complex protein 1 
MYO18A                0.061   myosin 18A isoform b 
MYO18A                0.060   myosin 18A isoform a 
LOC727832             0.060   golgi autoantigen, golgin subfamily a-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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