FAM175A 368

Name: FAM175A	Sequence: fasta or formatted (409aa)		NCBI GI: 109148531
Description: coiled-coil domain containing 98		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 18 2 C cysteine 1.7 7 1 D aspartate 5.9 24 2 E glutamate 8.1 33 2 F phenylalanine 4.9 20 2 G glycine 4.4 18 1 H histidine 3.7 15 2 I isoleucine 4.4 18 2 K lysine 8.6 35 2 L leucine 9.3 38 3 M methionine 2.4 10 1 N asparagine 4.6 19 1 P proline 2.7 11 1 Q glutamine 5.4 22 1 R arginine 4.6 19 2 S serine 10.8 44 2 T threonine 4.9 20 1 V valine 6.4 26 2 W tryptophan 0.5 2 1 Y tyrosine 2.4 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 98 FAM175B 0.234 hypothetical protein LOC23172 CCDC88A 0.013 coiled-coil domain containing 88A isoform 2 CCDC88A 0.013 coiled-coil domain containing 88A isoform 1 RNF40 0.013 ring finger protein 40 C6orf204 0.013 chromosome 6 open reading frame 204 isoform a [Homo... HOMER2 0.013 homer 2 isoform 2 HOMER2 0.013 homer 2 isoform 1 HOMER2 0.013 homer 2 isoform 4 HOMER2 0.013 homer 2 isoform 3 SPC25 0.013 spindle pole body component 25 KTN1 0.013 kinectin 1 isoform a KTN1 0.013 kinectin 1 isoform c KTN1 0.013 kinectin 1 isoform a CEP250 0.011 centrosomal protein 2 C14orf145 0.011 hypothetical protein LOC145508 STXBP4 0.011 syntaxin binding protein 4 ROCK2 0.011 Rho-associated, coiled-coil containing protein kinas... KIF3B 0.010 kinesin family member 3B KIAA1598 0.010 shootin1 isoform a KIAA1598 0.010 shootin1 isoform b TTC14 0.010 tetratricopeptide repeat domain 14 isoform a SPAG16 0.010 sperm associated antigen 16 isoform 1 UACA 0.010 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.010 uveal autoantigen with coiled-coil domains and ankyr... CENPF 0.010 centromere protein F SMC2 0.010 structural maintenance of chromosomes 2 SMC2 0.010 structural maintenance of chromosomes 2 SMC2 0.010 structural maintenance of chromosomes 2 CDC42BPA 0.010 CDC42-binding protein kinase alpha isoform B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.