HOMER2 30150

Name: HOMER2	Sequence: fasta or formatted (354aa)		NCBI GI: 46249351
Description: homer 2 isoform 2		Referenced in: Neurons
Other entries for this name: alt prot [288aa] homer 2 isoform 3 alt prot [299aa] homer 2 isoform 4 alt prot [343aa] homer 2 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 24 2 C cysteine 0.8 3 1 D aspartate 5.6 20 2 E glutamate 11.6 41 2 F phenylalanine 3.4 12 1 G glycine 3.1 11 1 H histidine 1.7 6 1 I isoleucine 5.4 19 2 K lysine 9.9 35 2 L leucine 7.6 27 1 M methionine 1.1 4 1 N asparagine 5.4 19 1 P proline 2.0 7 1 Q glutamine 6.2 22 2 R arginine 6.2 22 2 S serine 9.0 32 2 T threonine 7.3 26 2 V valine 4.2 15 1 W tryptophan 1.1 4 1 Y tyrosine 1.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homer 2 isoform 2 HOMER2 0.955 homer 2 isoform 1 HOMER2 0.667 homer 2 isoform 4 HOMER2 0.622 homer 2 isoform 3 HOMER1 0.491 homer 1 HOMER3 0.406 Homer, neuronal immediate early gene, 3 isoform 1 [... HOMER3 0.406 Homer, neuronal immediate early gene, 3 isoform 1 [... HOMER3 0.400 Homer, neuronal immediate early gene, 3 isoform 2 [... HOMER3 0.334 Homer, neuronal immediate early gene, 3 isoform 3 [... KIF20B 0.066 M-phase phosphoprotein 1 ENAH 0.064 enabled homolog isoform a ENAH 0.064 enabled homolog isoform b CCDC88A 0.060 coiled-coil domain containing 88A isoform 2 CCDC88A 0.060 coiled-coil domain containing 88A isoform 1 CGN 0.057 cingulin NUMA1 0.054 nuclear mitotic apparatus protein 1 EEA1 0.052 early endosome antigen 1, 162kD GOLGA4 0.052 golgi autoantigen, golgin subfamily a, 4 TMF1 0.051 TATA element modulatory factor 1 CLIP1 0.051 restin isoform b CLIP1 0.051 restin isoform a CENPE 0.051 centromere protein E PPP1R12A 0.051 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.051 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.051 protein phosphatase 1, regulatory (inhibitor) subunit... CIT 0.051 citron MYH4 0.049 myosin, heavy polypeptide 4, skeletal muscle MYH7 0.048 myosin, heavy chain 7, cardiac muscle, beta PPFIA1 0.048 PTPRF interacting protein alpha 1 isoform a PPFIA1 0.048 PTPRF interacting protein alpha 1 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.