Guide to the Human Genome
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Name: USP17L4 Sequence: fasta or formatted (530aa) NCBI GI: 169172781
Description:

PREDICTED: Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         38           2
 C cysteine            3.6         19           2
 D aspartate           4.7         25           2
 E glutamate           6.0         32           2
 F phenylalanine       2.5         13           1
 G glycine             5.3         28           2
 H histidine           4.7         25           2
 I isoleucine          2.5         13           1
 K lysine              5.8         31           2
 L leucine            10.8         57           2
 M methionine          2.6         14           1
 N asparagine          3.6         19           1
 P proline             5.1         27           2
 Q glutamine           7.2         38           2
 R arginine            4.7         25           2
 S serine              8.3         44           2
 T threonine           5.3         28           2
 V valine              5.7         30           1
 W tryptophan          1.3          7           1
 Y tyrosine            3.2         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... 
USP17L8               0.979   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
USP17L3               0.971   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
DUB3                  0.962   deubiquitinating enzyme 3 
LOC100287327          0.928   PREDICTED: hypothetical protein XP_002342475 
LOC728373             0.925   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC100287513          0.925   PREDICTED: hypothetical protein XP_002342480 
LOC100287441          0.925   PREDICTED: hypothetical protein XP_002342478 
LOC100287178          0.925   PREDICTED: hypothetical protein XP_002342472 
LOC100287364          0.923   PREDICTED: hypothetical protein XP_002342476 
LOC728419             0.923   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728405             0.923   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728400             0.923   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728393             0.923   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728379             0.923   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728373             0.923   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728369             0.923   PREDICTED: similar to deubiquitinating enzyme 3 [Ho...
LOC100287404          0.922   PREDICTED: hypothetical protein XP_002342477 
USP17L5               0.921   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
USP17                 0.921   ubiquitin specific peptidase 17 
LOC728379             0.921   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC100287478          0.917   PREDICTED: hypothetical protein XP_002342479 
LOC100288520          0.917   PREDICTED: hypothetical protein XP_002342486 
LOC100287205          0.914   PREDICTED: hypothetical protein XP_002342473 
LOC100287238          0.913   PREDICTED: hypothetical protein XP_002342474 
USP17L7               0.910   PREDICTED: Inactive ubiquitin carboxyl-terminal hydr...
LOC100287144          0.907   PREDICTED: hypothetical protein XP_002342471 
USP17L7               0.905   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
USP17L7               0.905   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
USP17L8               0.712   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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