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Search of human proteins with 109134330
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109134330 PHD finger protein 20-like 1 isoform 2 [Homo
sapiens]
(573 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109134330 PHD finger protein 20-like 1 isoform 2 [Homo sapiens] 1157 0.0
gi|111120331 PHD finger protein 20-like 1 isoform 1 [Homo sapiens] 1105 0.0
gi|39653325 PHD finger protein 20-like 1 isoform 3 [Homo sapiens] 572 e-163
gi|18034775 PHD finger protein 20 [Homo sapiens] 202 7e-52
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 45 1e-04
gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens] 43 7e-04
gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens] 43 7e-04
gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo sap... 42 0.002
gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo sap... 42 0.002
gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo sapi... 42 0.002
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 42 0.002
gi|45504380 jumonji domain containing 2B [Homo sapiens] 41 0.003
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 41 0.003
gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] 41 0.003
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 41 0.003
gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens] 40 0.004
gi|117938328 l(3)mbt-like isoform I [Homo sapiens] 40 0.004
gi|7662170 AMPK-related protein kinase 5 [Homo sapiens] 40 0.004
gi|117938330 l(3)mbt-like isoform II [Homo sapiens] 40 0.004
gi|158138528 l(3)mbt-like 4 [Homo sapiens] 40 0.006
gi|87299628 biorientation of chromosomes in cell division 1-like... 39 0.010
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 39 0.013
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.013
gi|149408144 TOX high mobility group box family member 2 isoform... 39 0.013
gi|149408141 TOX high mobility group box family member 2 isoform... 39 0.013
gi|14249636 TOX high mobility group box family member 2 isoform ... 39 0.013
gi|5174669 sex comb on midleg-like 2 [Homo sapiens] 39 0.013
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 39 0.017
gi|55770872 l(3)mbt-like 3 isoform b [Homo sapiens] 39 0.017
gi|55770870 l(3)mbt-like 3 isoform a [Homo sapiens] 39 0.017
>gi|109134330 PHD finger protein 20-like 1 isoform 2 [Homo sapiens]
Length = 573
Score = 1157 bits (2994), Expect = 0.0
Identities = 573/573 (100%), Positives = 573/573 (100%)
Query: 1 MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW 60
MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW
Sbjct: 1 MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW 60
Query: 61 DSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF 120
DSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF
Sbjct: 61 DSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF 120
Query: 121 YDGVIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAA 180
YDGVIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAA
Sbjct: 121 YDGVIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAA 180
Query: 181 AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF 240
AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF
Sbjct: 181 AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF 240
Query: 241 GLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED 300
GLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED
Sbjct: 241 GLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED 300
Query: 301 YNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSS 360
YNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSS
Sbjct: 301 YNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSS 360
Query: 361 GCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLAT 420
GCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLAT
Sbjct: 361 GCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLAT 420
Query: 421 LPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRG 480
LPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRG
Sbjct: 421 LPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRG 480
Query: 481 SEVTAPVASDSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDK 540
SEVTAPVASDSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDK
Sbjct: 481 SEVTAPVASDSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDK 540
Query: 541 SSTAFGIRSWDFSALLMKIPSYSPISLSGLPES 573
SSTAFGIRSWDFSALLMKIPSYSPISLSGLPES
Sbjct: 541 SSTAFGIRSWDFSALLMKIPSYSPISLSGLPES 573
>gi|111120331 PHD finger protein 20-like 1 isoform 1 [Homo sapiens]
Length = 1017
Score = 1105 bits (2859), Expect = 0.0
Identities = 547/548 (99%), Positives = 547/548 (99%)
Query: 1 MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW 60
MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW
Sbjct: 1 MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW 60
Query: 61 DSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF 120
DSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF
Sbjct: 61 DSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF 120
Query: 121 YDGVIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAA 180
YDGVIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAA
Sbjct: 121 YDGVIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAA 180
Query: 181 AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF 240
AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF
Sbjct: 181 AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF 240
Query: 241 GLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED 300
GLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED
Sbjct: 241 GLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED 300
Query: 301 YNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSS 360
YNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSS
Sbjct: 301 YNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSS 360
Query: 361 GCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLAT 420
GCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLAT
Sbjct: 361 GCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLAT 420
Query: 421 LPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRG 480
LPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRG
Sbjct: 421 LPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRG 480
Query: 481 SEVTAPVASDSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDK 540
SEVTAPVASDSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDK
Sbjct: 481 SEVTAPVASDSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDK 540
Query: 541 SSTAFGIR 548
SSTAFG R
Sbjct: 541 SSTAFGKR 548
>gi|39653325 PHD finger protein 20-like 1 isoform 3 [Homo sapiens]
Length = 285
Score = 572 bits (1473), Expect = e-163
Identities = 284/310 (91%), Positives = 284/310 (91%), Gaps = 26/310 (8%)
Query: 1 MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW 60
MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW
Sbjct: 1 MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW 60
Query: 61 DSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF 120
DSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF
Sbjct: 61 DSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF 120
Query: 121 YDGVIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAA 180
YDGVIRCLKRMHIKAMPEDAKGQ DWIALVKAAAA
Sbjct: 121 YDGVIRCLKRMHIKAMPEDAKGQ--------------------------DWIALVKAAAA 154
Query: 181 AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF 240
AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF
Sbjct: 155 AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF 214
Query: 241 GLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED 300
GLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED
Sbjct: 215 GLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED 274
Query: 301 YNETAPMLEQ 310
YNETAPMLEQ
Sbjct: 275 YNETAPMLEQ 284
>gi|18034775 PHD finger protein 20 [Homo sapiens]
Length = 1012
Score = 202 bits (514), Expect = 7e-52
Identities = 135/402 (33%), Positives = 195/402 (48%), Gaps = 50/402 (12%)
Query: 1 MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW 60
M+K PPNR GI+FE+GA+LEA D L+ WYP+ IE IDYEEGK+L+HF+RW+HRYDEW W
Sbjct: 1 MTKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCW 60
Query: 61 DSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF 120
DS LRPLE+ LRKEGL +E+ +F+ E+VLA W+DCR+YPAK+ A+NK+GT+TV+F
Sbjct: 61 DSPYLRPLEKIQLRKEGLHEEDGSSEFQINEQVLACWSDCRFYPAKVTAVNKDGTYTVKF 120
Query: 121 YDGVIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAA 180
YDGV++ +K +H+KA +D + V + P S + S + + A
Sbjct: 121 YDGVVQTVKHIHVKAFSKD-QNIVGNARPKE-----TDHKSLSSSPDKREKFKEQRKATV 174
Query: 181 AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF 240
K+K KP + K DK+ + K E S + + E KE++ + +
Sbjct: 175 NVKKDKE-DKPLKTEKRPKQPDKEGKLICSEKGKVSEKS--LPKNEKEDKENISENDREY 231
Query: 241 GLHV---------------ENV---------PKMVFP----------QPESTLSNKRKNN 266
EN+ P + P QP + +RK +
Sbjct: 232 SGDAQVDKKPENDIVKSPQENLREPKRKRGRPPSIAPTAVDSNSQTLQPITLELRRRKIS 291
Query: 267 QGNSFQAKRARLNKITGLLASKAVGVD-------GAEKKEDYNETAPMLEQAISPKPQSQ 319
+G KR RL+K + SK + + N T +L+ +
Sbjct: 292 KGCEVPLKRPRLDKNSSQEKSKNYSENTDKDLSRRRSSRLSTNGTHEILDPDLVVSDLVD 351
Query: 320 KKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSG 361
D SS + L S L +G+ S H GD SG
Sbjct: 352 TDPLQDTLSSTKESEEGQLKSALEAGQVSSALTCHSFGDGSG 393
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 45.4 bits (106), Expect = 1e-04
Identities = 66/291 (22%), Positives = 103/291 (35%), Gaps = 27/291 (9%)
Query: 184 KNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETFGLH 243
+ + S+ T K K KD + + S + E +KK+ S H
Sbjct: 175 RESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKK-----SSKKKKHRSESESKKRKH 229
Query: 244 VENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKEDYNE 303
PK + KRK ++ + K R ++ T ++ + + + +
Sbjct: 230 RSPTPK----SKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAK 285
Query: 304 TAPMLEQAISPKPQSQKKNEADISSS----ANTQKPALLSSTL---SSGKARSKKCKHES 356
T SP P S ++ E D S +TQ+P+ + SS K K E
Sbjct: 286 THTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEK 345
Query: 357 GDSSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSP--PQPVNPPRPFKHSERRRR 414
+ P +S PE L S T+P +PVNPP + S R R
Sbjct: 346 SATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPS--EASPTRDR 403
Query: 415 SQRLATLPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLP 465
S + +P S + S PSP + ++ SS PE P A P
Sbjct: 404 SPPKSPEKLPQSSSSESSPPSPQP-------TKVSRHASSSPESPKPAPAP 447
Score = 42.0 bits (97), Expect = 0.002
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 20/186 (10%)
Query: 283 GLLASKAVGVDGAEKKEDYNETA---PMLEQAISPKPQSQKKNEADISSSANTQKPALLS 339
G+L+ A GV ++ E T P A+ P + + + + SSS+++ + S
Sbjct: 2492 GMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSS 2551
Query: 340 STLSSGKARSKKCKHESGDSSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQP 399
S+ SSG + S DS G P+ PE + ++ + + + + PP+P
Sbjct: 2552 SSSSSGSS--------SSDSEG----SSLPVQPE-VALKRVPSPTPAPKEAVREGRPPEP 2598
Query: 400 VNPPRPFKHSERRRRSQRLATLPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVP 459
P K R S ++ S SS S ++ S SS + S P P
Sbjct: 2599 T----PAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKP 2654
Query: 460 DVAHLP 465
LP
Sbjct: 2655 GPQALP 2660
Score = 38.1 bits (87), Expect = 0.022
Identities = 48/203 (23%), Positives = 74/203 (36%), Gaps = 34/203 (16%)
Query: 257 STLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKEDYNETAPMLEQAISPKP 316
S+ S+ ++ G+S + +A K V KE E P P P
Sbjct: 2546 SSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPP-----EPTP 2600
Query: 317 QSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPELIQ 376
+K+ + SSS+++ + SS+ SS + S S SS P + P+ +
Sbjct: 2601 AKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQAL- 2659
Query: 377 VEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLATLPMPDDSV--EKVSSP 434
P+P +P +P ERR RS R P DS+ + S
Sbjct: 2660 --------------------PKPASPKKP-PPGERRSRSPR-----KPIDSLRDSRSLSY 2693
Query: 435 SPATDGKVFSISSQNQQESSVPE 457
SP + S Q+SS E
Sbjct: 2694 SPVERRRPSPQPSPRDQQSSSSE 2716
Score = 37.7 bits (86), Expect = 0.029
Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 24/273 (8%)
Query: 260 SNKRKNNQGNSFQAKRARLN--KITGLLASKAVGVDGAEKKEDYNETAPMLEQAISPKPQ 317
+++R++ +S + K++R++ + L + ++ + + ++P +Q P+
Sbjct: 736 TSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPR 795
Query: 318 SQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPEL--- 374
+ + + + T SS+ K +SK +S SS KS P
Sbjct: 796 RSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSI 855
Query: 375 --IQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLATLPMPDDSVEKVS 432
Q + ++ Q S ++SP + P +HS R+ + P S + S
Sbjct: 856 TSPQANEQSVTPQRRSCF--ESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSS 913
Query: 433 SPSPATDGKVFSISSQNQQESSVPEVPDVAHLP-------LEKLGPCLPLD---LSRGSE 482
SP P KV +I S Q+ S P + + + PC ++ L R S
Sbjct: 914 SPQP----KVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSH 969
Query: 483 VTAPVASDSSYRNECPRAEKEDTQMLPNPSSKA 515
+ + D+ + E P + + P P KA
Sbjct: 970 -SGSSSPDTKVKPETPPRQSHSGSISPYPKVKA 1001
>gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens]
Length = 910
Score = 43.1 bits (100), Expect = 7e-04
Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 11/236 (4%)
Query: 315 KPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPEL 374
K K + ADI ++ +K +++ S + K + + PP+ L+ +
Sbjct: 60 KRHRDKIHGADIIRASMRKKRPQIAAEQSKDRENGAKESWVNNVNKDAFLPPE--LAGVV 117
Query: 375 IQVEDLTLVSQLSSSVINKTSPPQPV---NPPRPFKHSERRRRSQRLATLPMPDDSVEKV 431
+ E+ + SSSV+N S + N +P E+R+ + LP S +
Sbjct: 118 EEPEEDAAPASPSSSVVNPASSVIDMSQENTRKPNVSPEKRKNPFNSSKLPEGHSSQQTK 177
Query: 432 SSPSPATDGKVFSISSQNQQESSVPE--VPDVAHLPLEKLGPCLPLDLSRGSEVTAPVAS 489
+ S +F S +++ S + V D + LEK LP LS GS++ AP+
Sbjct: 178 NEQSKNGRTGLFQTSKEDELSESKEKSTVADTSIQKLEKSKQTLP-GLSNGSQIKAPIPK 236
Query: 490 DSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDKSSTAF 545
+ K+D Q P + ++ RGAP GI K D + +
Sbjct: 237 ARKMIYKSTDLNKDDNQSFPRQRTDSL-KARGAP--RGILKRNSSSSSTDSETLRY 289
>gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens]
Length = 934
Score = 43.1 bits (100), Expect = 7e-04
Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 11/236 (4%)
Query: 315 KPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPEL 374
K K + ADI ++ +K +++ S + K + + PP+ L+ +
Sbjct: 60 KRHRDKIHGADIIRASMRKKRPQIAAEQSKDRENGAKESWVNNVNKDAFLPPE--LAGVV 117
Query: 375 IQVEDLTLVSQLSSSVINKTSPPQPV---NPPRPFKHSERRRRSQRLATLPMPDDSVEKV 431
+ E+ + SSSV+N S + N +P E+R+ + LP S +
Sbjct: 118 EEPEEDAAPASPSSSVVNPASSVIDMSQENTRKPNVSPEKRKNPFNSSKLPEGHSSQQTK 177
Query: 432 SSPSPATDGKVFSISSQNQQESSVPE--VPDVAHLPLEKLGPCLPLDLSRGSEVTAPVAS 489
+ S +F S +++ S + V D + LEK LP LS GS++ AP+
Sbjct: 178 NEQSKNGRTGLFQTSKEDELSESKEKSTVADTSIQKLEKSKQTLP-GLSNGSQIKAPIPK 236
Query: 490 DSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDKSSTAF 545
+ K+D Q P + ++ RGAP GI K D + +
Sbjct: 237 ARKMIYKSTDLNKDDNQSFPRQRTDSL-KARGAP--RGILKRNSSSSSTDSETLRY 289
Score = 34.3 bits (77), Expect = 0.32
Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 24/155 (15%)
Query: 305 APMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSSGKAR---SKKCKHESGDSSG 361
A L + P+P + + ++P+ + TL AR SK + S DSS
Sbjct: 462 ADELSHCVEPEPSQVPGGSSRDRQQGSEEEPSPVLKTLERSAARKMPSKSLEDISSDSSN 521
Query: 362 CIKPPKSPLSPELIQ-VEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLAT 420
K P EL++ ED++ V P P PF H ++ +R +
Sbjct: 522 QAKVDNQP--EELVRSAEDVSTV---------------PTQPDNPFSHPDKLKRMSKSVP 564
Query: 421 LPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSV 455
+ D+S ++ + + + + +S + SS+
Sbjct: 565 AFLQDESDDRETDTASESS---YQLSRHKKSPSSL 596
>gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 42.0 bits (97), Expect = 0.002
Identities = 90/394 (22%), Positives = 152/394 (38%), Gaps = 48/394 (12%)
Query: 191 PRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDV--EKKEDLPTSSE-TFGLHVENV 247
P++SAN++ K D K + + +E A + KKEDLP SSE N+
Sbjct: 23 PKSSANTSHPKQDDSPKSSEETIQPKEGDIPKAPEETIQSKKEDLPKSSEKAIQPKESNI 82
Query: 248 PKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKEDYNETAPM 307
PK + L N K + S Q K + KA KKED +++
Sbjct: 83 PKSSAKPIQPKLGNIPKASVKPS-QPKEGDI--------PKAPEETIQSKKEDLPKSS-- 131
Query: 308 LEQAISPKPQSQKKNEADI-SSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKP- 365
E+AI PK E DI SSA +P L + +S K K I+P
Sbjct: 132 -EEAIQPK-------EGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQPK 183
Query: 366 ----PKS---PLSPELIQVEDLTL-VSQLSSSVINKTSPPQPVNP-----PRPFKHSERR 412
PKS P+ P+L + ++ SQ I+K SP + + P P+ + + +
Sbjct: 184 EGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISK-SPEEAIQPKEGDLPKSLEEAIQP 242
Query: 413 R-----RSQRLATLPMPDDSVEKVSSPSPATDGKVFSISSQNQQ--ESSVPEVPDVAHLP 465
+ +S A P D + + +G + + Q + +P+ P+ A P
Sbjct: 243 KEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAIQP 302
Query: 466 LEKLGPCLPLDLSRGSEVTAPVASDSSY---RNECPRAEKEDTQMLPNPSSKAIADGRGA 522
E P P + E P + + + + P++ +E Q + S K++ + +
Sbjct: 303 KEGDIPKSPKQAIQPKEGDIPKSLEEAIPPKEIDIPKSPEETIQPKEDDSPKSLEEATPS 362
Query: 523 PAAAGISKTEKKVKLEDKSSTAFGIRSWDFSALL 556
+ E+ ++ + + DF A L
Sbjct: 363 KEGDILKPEEETMEFPEGDKVKVILSKEDFEASL 396
>gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo
sapiens]
Length = 553
Score = 42.0 bits (97), Expect = 0.002
Identities = 90/394 (22%), Positives = 152/394 (38%), Gaps = 48/394 (12%)
Query: 191 PRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDV--EKKEDLPTSSE-TFGLHVENV 247
P++SAN++ K D K + + +E A + KKEDLP SSE N+
Sbjct: 90 PKSSANTSHPKQDDSPKSSEETIQPKEGDIPKAPEETIQSKKEDLPKSSEKAIQPKESNI 149
Query: 248 PKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKEDYNETAPM 307
PK + L N K + S Q K + KA KKED +++
Sbjct: 150 PKSSAKPIQPKLGNIPKASVKPS-QPKEGDI--------PKAPEETIQSKKEDLPKSS-- 198
Query: 308 LEQAISPKPQSQKKNEADI-SSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKP- 365
E+AI PK E DI SSA +P L + +S K K I+P
Sbjct: 199 -EEAIQPK-------EGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQPK 250
Query: 366 ----PKS---PLSPELIQVEDLTL-VSQLSSSVINKTSPPQPVNP-----PRPFKHSERR 412
PKS P+ P+L + ++ SQ I+K SP + + P P+ + + +
Sbjct: 251 EGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISK-SPEEAIQPKEGDLPKSLEEAIQP 309
Query: 413 R-----RSQRLATLPMPDDSVEKVSSPSPATDGKVFSISSQNQQ--ESSVPEVPDVAHLP 465
+ +S A P D + + +G + + Q + +P+ P+ A P
Sbjct: 310 KEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAIQP 369
Query: 466 LEKLGPCLPLDLSRGSEVTAPVASDSSY---RNECPRAEKEDTQMLPNPSSKAIADGRGA 522
E P P + E P + + + + P++ +E Q + S K++ + +
Sbjct: 370 KEGDIPKSPKQAIQPKEGDIPKSLEEAIPPKEIDIPKSPEETIQPKEDDSPKSLEEATPS 429
Query: 523 PAAAGISKTEKKVKLEDKSSTAFGIRSWDFSALL 556
+ E+ ++ + + DF A L
Sbjct: 430 KEGDILKPEEETMEFPEGDKVKVILSKEDFEASL 463
Score = 33.9 bits (76), Expect = 0.42
Identities = 65/300 (21%), Positives = 115/300 (38%), Gaps = 33/300 (11%)
Query: 242 LHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKEDY 301
L +E+V +PE L + + ++G++ ++ L+ LLA + + + A++K
Sbjct: 7 LGMESVKAGASGKPEMRLGTQEETSEGDANESSLLVLSSNVPLLALEFLEIAQAKEKAFL 66
Query: 302 NETAPMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSG 361
+ SQ+ ++ SSANT P S SS + K GD
Sbjct: 67 PMVSHTFHMRTEESDASQEGDDLP-KSSANTSHPKQDDSPKSSEETIQPK----EGDI-- 119
Query: 362 CIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLATL 421
PK+P + EDL S+ K P+ N P+ S + +L +
Sbjct: 120 ----PKAPEETIQSKKEDLPKSSE-------KAIQPKESNIPK----SSAKPIQPKLGNI 164
Query: 422 PMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLGP---CLPLDLS 478
P + K S P K + Q+++E +P+ + A P E P P+
Sbjct: 165 P---KASVKPSQPKEGDIPKAPEETIQSKKE-DLPKSSEEAIQPKEGDIPKSSAKPIQPK 220
Query: 479 RGSEVTAPVASDSSYRNECPRAEKEDTQM----LPNPSSKAIADGRGAPAAAGISKTEKK 534
G+ V ++ P++ +E Q +P S+K I G A + ++ K
Sbjct: 221 LGNIAKTSVKPSQPKESDIPKSPEETIQPKEGDIPKSSAKPIQPKLGNIPKASVKPSQPK 280
>gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 42.0 bits (97), Expect = 0.002
Identities = 90/394 (22%), Positives = 152/394 (38%), Gaps = 48/394 (12%)
Query: 191 PRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDV--EKKEDLPTSSE-TFGLHVENV 247
P++SAN++ K D K + + +E A + KKEDLP SSE N+
Sbjct: 23 PKSSANTSHPKQDDSPKSSEETIQPKEGDIPKAPEETIQSKKEDLPKSSEKAIQPKESNI 82
Query: 248 PKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKEDYNETAPM 307
PK + L N K + S Q K + KA KKED +++
Sbjct: 83 PKSSAKPIQPKLGNIPKASVKPS-QPKEGDI--------PKAPEETIQSKKEDLPKSS-- 131
Query: 308 LEQAISPKPQSQKKNEADI-SSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKP- 365
E+AI PK E DI SSA +P L + +S K K I+P
Sbjct: 132 -EEAIQPK-------EGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQPK 183
Query: 366 ----PKS---PLSPELIQVEDLTL-VSQLSSSVINKTSPPQPVNP-----PRPFKHSERR 412
PKS P+ P+L + ++ SQ I+K SP + + P P+ + + +
Sbjct: 184 EGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISK-SPEEAIQPKEGDLPKSLEEAIQP 242
Query: 413 R-----RSQRLATLPMPDDSVEKVSSPSPATDGKVFSISSQNQQ--ESSVPEVPDVAHLP 465
+ +S A P D + + +G + + Q + +P+ P+ A P
Sbjct: 243 KEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAIQP 302
Query: 466 LEKLGPCLPLDLSRGSEVTAPVASDSSY---RNECPRAEKEDTQMLPNPSSKAIADGRGA 522
E P P + E P + + + + P++ +E Q + S K++ + +
Sbjct: 303 KEGDIPKSPKQAIQPKEGDIPKSLEEAIPPKEIDIPKSPEETIQPKEDDSPKSLEEATPS 362
Query: 523 PAAAGISKTEKKVKLEDKSSTAFGIRSWDFSALL 556
+ E+ ++ + + DF A L
Sbjct: 363 KEGDILKPEEETMEFPEGDKVKVILSKEDFEASL 396
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 42.0 bits (97), Expect = 0.002
Identities = 83/383 (21%), Positives = 137/383 (35%), Gaps = 64/383 (16%)
Query: 134 KAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAAAAAKNKTGSKPRT 193
KA E+ +G +K + P+D A S M S A K + K ++ S PR
Sbjct: 572 KAAAEEPRGGLKIESET----PVDLASS----MPSSRHKAATKGSRKPNIKKESKSSPRP 623
Query: 194 SANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETFGLHVENVPKMVFP 253
+A K K + +E T ++ D ++ E LP SS+T PK +P
Sbjct: 624 TAEKKKYKSTSKSS----QKSREIIETDTSSSDSDESESLPPSSQT--------PK--YP 669
Query: 254 QPESTLSNKRKNNQGNSFQAKRA------------------RLNKITGLLASKAVGVDGA 295
+ T + +SF +R R I + + + G
Sbjct: 670 ESNRTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRYPLIVKIDLNLLTRIPG- 728
Query: 296 EKKEDYNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHE 355
+ Y ET P P+ +KKN + +T++ +S S K + +K K+E
Sbjct: 729 ---KPYKETEP---------PKGEKKNVPE----KHTREAQKQASEKVSNKGK-RKHKNE 771
Query: 356 SGDSSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNP-----PRPFKHSE 410
+ + K PK+ S S+ K P P P P+ +H
Sbjct: 772 DDNRASESKKPKTEDKNSAGHKPSSNRESSKQSAAKEKDLLPSPAGPVPSKDPKT-EHGS 830
Query: 411 RRRRSQRLATLPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLG 470
R+R + ++L +S ++ S S + ++ + SS EV + A
Sbjct: 831 RKRTISQSSSLKSSSNSNKETSGSSKNSSSTSKQKKTEGKTSSSSKEVKEKAPSSSSNCP 890
Query: 471 PCLPLDLSRGSEVTAPVASDSSY 493
P P S T V D +Y
Sbjct: 891 PSAPTLDSSKPRRTKLVFDDRNY 913
>gi|45504380 jumonji domain containing 2B [Homo sapiens]
Length = 1096
Score = 41.2 bits (95), Expect = 0.003
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 15/113 (13%)
Query: 90 GEEVLARWTDCRYYPAKIEAINKEGTFTVQFYDGVIRCLKRMHIKAMPEDAKGQVKSQHP 149
GE V RWTD Y AK + + V+F DG +KR I + E+ +V+S+
Sbjct: 980 GELVELRWTDGNLYKAKFISSVTSHIYQVEFEDGSQLTVKRGDIFTLEEELPKRVRSRLS 1039
Query: 150 LSWCCPIDPAGSCNQSMGSEDWIALVKAAAAAAAKNKTGSKPRTSANSNKDKD 202
LS P +PA S G E A AAK P + +S + +D
Sbjct: 1040 LSTGAPQEPAFS-----GEE----------AKAAKRPRVGTPLATEDSGRSQD 1077
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 40.8 bits (94), Expect = 0.003
Identities = 83/387 (21%), Positives = 135/387 (34%), Gaps = 57/387 (14%)
Query: 182 AAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKED----LPTSS 237
AA T +P + A + ++ VP+ +E TS A P E+ +PT
Sbjct: 1056 AAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPE 1115
Query: 238 ETFGLHVENVPKMVFPQPESTLSNKRK--NNQGNSFQAKRARLNKITGLLASKAVGVDGA 295
E P P PE S + +F A + + AS AV V
Sbjct: 1116 EPAS------PAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEES---ASAAVAVPTP 1166
Query: 296 EKKEDYNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLS--SGKARSKKCK 353
E+ P ++ S E S +A+ PA + +TL + A S
Sbjct: 1167 EESASPAAAVPTPAESASFAAVVATLEEPT-SPAASVPTPAAMVATLEEFTSPAASVPTS 1225
Query: 354 HESGDSSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRR 413
E + + P+ P SP TL SS+ T P+ ++ P +
Sbjct: 1226 EEPASLAAAVSNPEEPTSPAAAVP---TLEEPTSSAAAVLT--PEELSSPAASVPTPEEP 1280
Query: 414 RSQRLATLPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLGPCL 473
S A + + + + P+P +V +I + + VP +P A P+E++ P
Sbjct: 1281 ASPAAAVSNLEEPASPAAAVPTP----EVAAIPAASVPTPEVPAIPAAAVPPMEEVSP-- 1334
Query: 474 PLDLSRGSEVTAPVASDSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEK 533
+ P S++ + P +E+ G P S T
Sbjct: 1335 ---------IGVPFLGVSAHTDSVPISEE------------------GTPVLEEASSTGM 1367
Query: 534 KVKLEDKSSTAFGIRSWDFSALLMKIP 560
+K ED S FGI+ + L K+P
Sbjct: 1368 WIK-EDLDSLVFGIKEVTSTVLHGKVP 1393
>gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]
Length = 1226
Score = 40.8 bits (94), Expect = 0.003
Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 36/288 (12%)
Query: 183 AKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETFGL 242
AKNK S+NS+ D+D++E K P+KK EK++ L T+ G
Sbjct: 760 AKNKESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLE-------EKRKSLRTTGFYSGF 812
Query: 243 HVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVG--VDGAEKKED 300
E K + L+N + Q + + ++ + I G K + ++ +
Sbjct: 813 S-EVAEKRI-----KLLNNSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEAA 866
Query: 301 YNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALL---SSTLSSGKARSKKCKHE-- 355
+ P E+ ++ + E S S +KP + S + K E
Sbjct: 867 ASPPHPAPEEGVAEESLQTVAEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFP 926
Query: 356 -SGDSSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRR 414
SG +S PP +P SP + V + + Q SS +++ P P + R +
Sbjct: 927 SSGSNSVLNTPPTTPESPSSVTVTEGS--RQQSSVTVSE--------PLAPNQEEVRSIK 976
Query: 415 SQRLATLPMPD-----DSVEKVSSPSPATDGKVFSISSQNQQESSVPE 457
S+ +T+ + ++ + SPA S SS NQ E PE
Sbjct: 977 SETDSTIEVDSVAGELQDLQSEGNSSPAGFDASVSSSSSNQPEPEHPE 1024
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 40.8 bits (94), Expect = 0.003
Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 36/288 (12%)
Query: 183 AKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETFGL 242
AKNK S+NS+ D+D++E K P+KK EK++ L T+ G
Sbjct: 846 AKNKESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLE-------EKRKSLRTTGFYSGF 898
Query: 243 HVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVG--VDGAEKKED 300
E K + L+N + Q + + ++ + I G K + ++ +
Sbjct: 899 S-EVAEKRI-----KLLNNSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEAA 952
Query: 301 YNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALL---SSTLSSGKARSKKCKHE-- 355
+ P E+ ++ + E S S +KP + S + K E
Sbjct: 953 ASPPHPAPEEGVAEESLQTVAEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFP 1012
Query: 356 -SGDSSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRR 414
SG +S PP +P SP + V + + Q SS +++ P P + R +
Sbjct: 1013 SSGSNSVLNTPPTTPESPSSVTVTEGS--RQQSSVTVSE--------PLAPNQEEVRSIK 1062
Query: 415 SQRLATLPMPD-----DSVEKVSSPSPATDGKVFSISSQNQQESSVPE 457
S+ +T+ + ++ + SPA S SS NQ E PE
Sbjct: 1063 SETDSTIEVDSVAGELQDLQSEGNSSPAGFDASVSSSSSNQPEPEHPE 1110
Score = 36.2 bits (82), Expect = 0.084
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 26 QKWYPSRIEKIDYEEGKML--VHFERWSHRYDEWIYWDSNRLRPLER 70
QK Y + I+ D E G++L VH+ W+ RYDEWI D +RP ++
Sbjct: 585 QKMYEASIKDSDVEGGEVLYLVHYCGWNVRYDEWIKAD-KIVRPADK 630
>gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens]
Length = 935
Score = 40.4 bits (93), Expect = 0.004
Identities = 54/237 (22%), Positives = 96/237 (40%), Gaps = 12/237 (5%)
Query: 315 KPQSQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPEL 374
K K + ADI ++ +K +++ S + K + + PP+ L+ +
Sbjct: 60 KRHRDKIHGADIIRASMRKKRPQIAAEQSKDRENGAKESWVNNVNKDAFLPPE--LAGVV 117
Query: 375 IQVEDLTLVSQLSSSVINKTSPPQPV---NPPRPFKHSERRRRSQ-RLATLPMPDDSVEK 430
+ E+ + SSSV+N S + N +P E++R++ + LP S +
Sbjct: 118 EEPEEDAAPASPSSSVVNPASSVIDMSQENTRKPNVSPEKQRKNPFNSSKLPEGHSSQQT 177
Query: 431 VSSPSPATDGKVFSISSQNQQESSVPE--VPDVAHLPLEKLGPCLPLDLSRGSEVTAPVA 488
+ S +F S +++ S + V D + LEK LP LS GS++ AP+
Sbjct: 178 KNEQSKNGRTGLFQTSKEDELSESKEKSTVADTSIQKLEKSKQTLP-GLSNGSQIKAPIP 236
Query: 489 SDSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDKSSTAF 545
+ K+D Q P + ++ RGAP GI K D + +
Sbjct: 237 KARKMIYKSTDLNKDDNQSFPRQRTDSL-KARGAP--RGILKRNSSSSSTDSETLRY 290
Score = 34.3 bits (77), Expect = 0.32
Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 24/155 (15%)
Query: 305 APMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSSGKAR---SKKCKHESGDSSG 361
A L + P+P + + ++P+ + TL AR SK + S DSS
Sbjct: 463 ADELSHCVEPEPSQVPGGSSRDRQQGSEEEPSPVLKTLERSAARKMPSKSLEDISSDSSN 522
Query: 362 CIKPPKSPLSPELIQ-VEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLAT 420
K P EL++ ED++ V P P PF H ++ +R +
Sbjct: 523 QAKVDNQP--EELVRSAEDVSTV---------------PTQPDNPFSHPDKLKRMSKSVP 565
Query: 421 LPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSV 455
+ D+S ++ + + + + +S + SS+
Sbjct: 566 AFLQDESDDRETDTASESS---YQLSRHKKSPSSL 597
>gi|117938328 l(3)mbt-like isoform I [Homo sapiens]
Length = 772
Score = 40.4 bits (93), Expect = 0.004
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 9 PGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPL 68
P + F++G +LEA+D + D + + LVHF+ W YD W S + P+
Sbjct: 341 PPLGFQVGMKLEAVDRMNPSLVCVASVTDVVDSRFLVHFDNWDDTYDYWCDPSSPYIHPV 400
Query: 69 ERPALRKEGLKDEEDFFD 86
+ + L +D+ D
Sbjct: 401 GWCQKQGKPLTPPQDYPD 418
Score = 39.7 bits (91), Expect = 0.008
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 8 RPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRP 67
RP +F + +LEA+D D E+ ++ +HF+ WSH YD WI D + P
Sbjct: 444 RPPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKIHFDGWSHGYDFWIDADHPDIHP 503
>gi|7662170 AMPK-related protein kinase 5 [Homo sapiens]
Length = 661
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/184 (24%), Positives = 70/184 (38%), Gaps = 19/184 (10%)
Query: 279 NKITGLLASKAVGVDGAEKKEDYNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALL 338
++ TGL A + G K + MLE+ S K ++ + A A + P+ L
Sbjct: 336 HRSTGLQADTEAKMKGLAKP---TTSEVMLERQRSLKKSKKENDFAQSGQDAVPESPSKL 392
Query: 339 SSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPELIQVED------LTLVSQLSSSVIN 392
SS G + + S+G I+ P P ++E + L S + V
Sbjct: 393 SSKRPKGILKKRSNSEHRSHSTGFIEGVVGPALPSTFKMEQDLCRTGVLLPSSPEAEVPG 452
Query: 393 KTSPPQPVNPPRP--FKHSERR--------RRSQRLATLPMPDDSVEKVSSPSPATDGKV 442
K SP Q P+ K +++R RS+ L D + SPSP +V
Sbjct: 453 KLSPKQSATMPKKGILKKTQQRESGYYSSPERSESSELLDSNDVMGSSIPSPSPPDPARV 512
Query: 443 FSIS 446
S S
Sbjct: 513 TSHS 516
>gi|117938330 l(3)mbt-like isoform II [Homo sapiens]
Length = 738
Score = 40.4 bits (93), Expect = 0.004
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 9 PGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPL 68
P + F++G +LEA+D + D + + LVHF+ W YD W S + P+
Sbjct: 341 PPLGFQVGMKLEAVDRMNPSLVCVASVTDVVDSRFLVHFDNWDDTYDYWCDPSSPYIHPV 400
Query: 69 ERPALRKEGLKDEEDFFD 86
+ + L +D+ D
Sbjct: 401 GWCQKQGKPLTPPQDYPD 418
Score = 39.7 bits (91), Expect = 0.008
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 8 RPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRP 67
RP +F + +LEA+D D E+ ++ +HF+ WSH YD WI D + P
Sbjct: 444 RPPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKIHFDGWSHGYDFWIDADHPDIHP 503
>gi|158138528 l(3)mbt-like 4 [Homo sapiens]
Length = 623
Score = 40.0 bits (92), Expect = 0.006
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 4 KPPNRP-GITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDS 62
+ PN P F++G +LEA+D D E ++LVHF+ W YD W +S
Sbjct: 182 RSPNGPMSKEFQVGMKLEAVDRKNPSLVCVATIADIVEDRLLVHFDNWDDSYDYWCDVNS 241
Query: 63 NRLRPL------ERPALRKEGLKDEEDF 84
++P+ R + +G + E+F
Sbjct: 242 PYVQPVGWCQENGRTLIAPQGYPNPENF 269
Score = 38.1 bits (87), Expect = 0.022
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 36 IDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPL 68
+D ++ ++ VHF+ W H+YD W+ DS + P+
Sbjct: 319 VDVDDQRVKVHFDGWDHKYDYWVEADSPDIHPI 351
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 39.3 bits (90), Expect = 0.010
Identities = 67/351 (19%), Positives = 136/351 (38%), Gaps = 35/351 (9%)
Query: 201 KDKDERKWFKVPSKKEETSTCIATPDVEKK--EDLPTSSETFGLHVENVPKMVFPQPEST 258
K+K ER+ K PS+ + + D K ++ S GL VE + Q + +
Sbjct: 725 KEKPERE--KTPSEDKLSVKHKYKGDCMHKTGDETELHSSEKGLKVEENIQKQSQQTKLS 782
Query: 259 LSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKEDYNETAPMLEQAISPKPQS 318
+K + + + K + L K ++ + D +KE+ + + + + +S
Sbjct: 783 SDDKTERKSKHRNERKLSVLGKDGKPVSEYIIKTDENVRKENNKKERRLSAEKTKAEHKS 842
Query: 319 QKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPELIQVE 378
++ +++ I + K ++ S KC +S + +KP E++ E
Sbjct: 843 RRSSDSKIQKDSLGSKQHGITLQRRSESYSEDKCDMDSTNMDSNLKP------EEVVHKE 896
Query: 379 DLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQRLATLPMPDDSVEKVSSPSPAT 438
S L ++ K+ S+ + + ++ + + + ++ ++P P
Sbjct: 897 KRRTKSLLEEKLVLKSK-------------SKTQGKQVKVVETELQEGATKQATTPKPDK 943
Query: 439 DGKVFSISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRGSEVTAPVASDSSYRNECP 498
+ S+ Q++S V + P E+ G + L S DSS+R + P
Sbjct: 944 EKNTEENDSEKQRKSKVED------KPFEETG--VEPVLETASSSAHSTQKDSSHRAKLP 995
Query: 499 RAE---KEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDKSSTAFG 546
A+ K D + ++DG + + SK KK K E+KS G
Sbjct: 996 LAKEKYKSDKDSTSTRLERKLSDGHKSRSLKHSSKDIKK-KDENKSDDKDG 1045
Score = 35.4 bits (80), Expect = 0.14
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 190 KPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETFGLHVENVPK 249
K S KD E K +E++ + T + +KE + +S E +H ++ P
Sbjct: 569 KVALSKKRKKDSRNVEENSKKKQQYEEDSKETLKTSEHCEKEKISSSKELKHVHAKSEPS 628
Query: 250 MVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKEDYNETAPMLE 309
+P LS N ++K R +K S V ++G +++ D + +E
Sbjct: 629 ----KPARRLSESLHVVDENKNESKLEREHK---RRTSTPVIMEGVQEETDTRDVKRQVE 681
Query: 310 QA--ISPKPQSQK---KNEADI--SSSANTQKPALLSSTLSSGKARSKKCKHESGD 358
++ + +PQ QK KNE + S +LL + S K + ++ K S D
Sbjct: 682 RSEICTEEPQKQKSTLKNEKHLKKDDSETPHLKSLLKKEVKSSKEKPEREKTPSED 737
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 38.9 bits (89), Expect = 0.013
Identities = 59/236 (25%), Positives = 85/236 (36%), Gaps = 28/236 (11%)
Query: 286 ASKAVGVDGAEKKEDYNETAP--MLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLS 343
A KA + AEK ++ +P L + P +K + S + P LLS L
Sbjct: 1014 AEKASRIRAAEKVSRGDQESPDACLPPTVPEAPAPPQK-PLNSQSQKHLAPPPLLSPLLP 1072
Query: 344 SGKARSKKCKHESGDSSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVIN----------- 392
S K +K + + G + P++PLS EL + SS +
Sbjct: 1073 SIKPTVRKTRQD-----GSQEAPEAPLSSELEPFHPKPKIRTRKSSRMTPFPATSAAPEP 1127
Query: 393 --KTSPPQPVNPPRPFKHSERRRRSQRLATLPMPDDSVEKVSSPSPATDGKVFS-----I 445
TS QPV P +P + R R ++ P P PS +TD V S +
Sbjct: 1128 HPSTSTAQPVTP-KPTSQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQV 1186
Query: 446 SSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRGSEVTAPVASDSSYRNECPRAE 501
+ + SSV V LE L P D SE T+ R+ E
Sbjct: 1187 TRGRKSRSSVKTPETVVPTALE-LQPSTSTDRPVTSEPTSQATRGRKNRSSVKTPE 1241
Score = 31.2 bits (69), Expect = 2.7
Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 25/210 (11%)
Query: 123 GVIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAAAA 182
G + L+ ++AMP + +S P++ PI P S A + AA
Sbjct: 1679 GQSKTLRSSTVRAMPVPTTPEFQS--PVTTDQPISPEPITQPSCIKRQRAAGNPGSLAAP 1736
Query: 183 AKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETFGL 242
+K S P K + ++W V + E+ T I P + + P +
Sbjct: 1737 IDHKPCSAPLEP----KSQASRNQRWGAV--RAAESLTAIPEPASPQLLETPIHASQIQ- 1789
Query: 243 HVENVPKMVFP---QPESTLSNKRK----NNQGNSFQAKRARLNKITGLLASKAVGVDGA 295
VE + F QP+++ S KR ++ + Q +R +++ T ++
Sbjct: 1790 KVEPAGRSRFTPELQPKASQSRKRSLATMDSPPHQKQPQRGEVSQKTVIIK--------- 1840
Query: 296 EKKEDYNETAPMLEQAISPKPQSQKKNEAD 325
E++ED E E ++PKP +K+++A+
Sbjct: 1841 EEEEDTAEKPGKEEDVVTPKPGKRKRDQAE 1870
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 38.9 bits (89), Expect = 0.013
Identities = 55/228 (24%), Positives = 78/228 (34%), Gaps = 23/228 (10%)
Query: 285 LASKAVGVDGAEKKEDYNETAPMLEQAISPKPQSQKKNEADISSSANTQKPALLSSTLSS 344
LA +A G+ GA E P + ++ A +S P S T
Sbjct: 58 LAERAGGIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP 117
Query: 345 GKARSKKCKHESGDSSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPR 404
G K + + ++ K ++P S LS+ TS P P P
Sbjct: 118 GPLGQKGLRISAEETVARGKATEAPKR------------SALSAGARRDTSGPTPGTPSP 165
Query: 405 PFKHSERRRRSQRLATLPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHL 464
+ R R + LP P S P P T+G S+SS ++ ++ P P
Sbjct: 166 AM--ARRSRAAGTEVGLPRPAPSAR----PRPPTEGPRKSVSSASEHSTTEPS-PAARRR 218
Query: 465 PLEKLGPCLPLDLSRGSEVT---APVASDSSYRNECPRAEKEDTQMLP 509
P G P S S T +P S S R PRA +Q P
Sbjct: 219 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARG-TPRAPAHPSQPKP 265
>gi|149408144 TOX high mobility group box family member 2 isoform a
[Homo sapiens]
Length = 506
Score = 38.9 bits (89), Expect = 0.013
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 45/265 (16%)
Query: 175 VKAAAAAAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKE---ETSTCIATPDVEKKE 231
++++ A ++ + GSK T + S+ ++++ FK+ +K + P +KK+
Sbjct: 182 IRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKK 241
Query: 232 D-----LPTS------------------SETFGLHVENVPKMVFPQPESTLSNKRKNNQG 268
D P S S TFG +V K+V +S +++ +
Sbjct: 242 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFG----DVSKIVASMWDSLGEEQKQAYKR 297
Query: 269 NSFQAKRARLNKITGL---LASKAVGVDGAEKKEDYNETAPML--EQAISPKP-QSQKKN 322
+ AK+ L + L SK+ G K N A ML +Q + P +
Sbjct: 298 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 357
Query: 323 EADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPELIQVEDLTL 382
+D+ + + PA L+ TL S G S+ PP PLSP L Q L
Sbjct: 358 PSDLQAFRSGASPASLARTLGSKSLL-------PGLSASPPPPPSFPLSPTLHQQLSLPP 410
Query: 383 VSQ--LSSSVINKTSPPQPVNPPRP 405
+Q L S ++ + PQP P P
Sbjct: 411 HAQGALLSPPVSMSPAPQPPVLPTP 435
>gi|149408141 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 38.9 bits (89), Expect = 0.013
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 45/265 (16%)
Query: 175 VKAAAAAAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKE---ETSTCIATPDVEKKE 231
++++ A ++ + GSK T + S+ ++++ FK+ +K + P +KK+
Sbjct: 140 IRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKK 199
Query: 232 D-----LPTS------------------SETFGLHVENVPKMVFPQPESTLSNKRKNNQG 268
D P S S TFG +V K+V +S +++ +
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFG----DVSKIVASMWDSLGEEQKQAYKR 255
Query: 269 NSFQAKRARLNKITGL---LASKAVGVDGAEKKEDYNETAPML--EQAISPKP-QSQKKN 322
+ AK+ L + L SK+ G K N A ML +Q + P +
Sbjct: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
Query: 323 EADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPELIQVEDLTL 382
+D+ + + PA L+ TL S G S+ PP PLSP L Q L
Sbjct: 316 PSDLQAFRSGASPASLARTLGSKSLL-------PGLSASPPPPPSFPLSPTLHQQLSLPP 368
Query: 383 VSQ--LSSSVINKTSPPQPVNPPRP 405
+Q L S ++ + PQP P P
Sbjct: 369 HAQGALLSPPVSMSPAPQPPVLPTP 393
>gi|14249636 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 38.9 bits (89), Expect = 0.013
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 45/265 (16%)
Query: 175 VKAAAAAAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKE---ETSTCIATPDVEKKE 231
++++ A ++ + GSK T + S+ ++++ FK+ +K + P +KK+
Sbjct: 140 IRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKK 199
Query: 232 D-----LPTS------------------SETFGLHVENVPKMVFPQPESTLSNKRKNNQG 268
D P S S TFG +V K+V +S +++ +
Sbjct: 200 DPNEPQKPVSAYALFFRDTQAAIKGQNPSATFG----DVSKIVASMWDSLGEEQKQAYKR 255
Query: 269 NSFQAKRARLNKITGL---LASKAVGVDGAEKKEDYNETAPML--EQAISPKP-QSQKKN 322
+ AK+ L + L SK+ G K N A ML +Q + P +
Sbjct: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
Query: 323 EADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPELIQVEDLTL 382
+D+ + + PA L+ TL S G S+ PP PLSP L Q L
Sbjct: 316 PSDLQAFRSGASPASLARTLGSKSLL-------PGLSASPPPPPSFPLSPTLHQQLSLPP 368
Query: 383 VSQ--LSSSVINKTSPPQPVNPPRP 405
+Q L S ++ + PQP P P
Sbjct: 369 HAQGALLSPPVSMSPAPQPPVLPTP 393
>gi|5174669 sex comb on midleg-like 2 [Homo sapiens]
Length = 700
Score = 38.9 bits (89), Expect = 0.013
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 3 KKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDS 62
K+PP P F++G +LEA+D + D + ++ + F+ WS +D W +DS
Sbjct: 162 KEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDS 221
Query: 63 NRLRP 67
+ P
Sbjct: 222 RDIFP 226
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 38.5 bits (88), Expect = 0.017
Identities = 66/252 (26%), Positives = 96/252 (38%), Gaps = 45/252 (17%)
Query: 335 PALLSSTLSSGKARSKKCKHESGDSSGCIKPP--KSPLSPELIQVEDLTLVSQ---LSSS 389
PA ST S R ++ G G PP K+P S + + LV Q L +
Sbjct: 367 PAACLSTPYSSIPRGREKAGPMGSHQGPGPPPCQKAP-SGLVTSCKAPFLVDQSQKLPAV 425
Query: 390 VINKTSPPQPVNPPRPFKHSERRRRSQRLATLPMPDDSVEKVSSPS------PATDGKVF 443
+ PP + PP+ K ++ +P P V +PS PA K
Sbjct: 426 PASSWKPPPGLAPPQ--KAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPAIPAPSRKAS 483
Query: 444 SISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRGSEVTAPVASDSSYRNECPRAEKE 503
+ S+ ++ S+VP P P +K P +P T P + S P A K+
Sbjct: 484 AASASPRKASAVPAPPQKTPPPSQK-APSVP---------TIPQKAVS------PTAPKK 527
Query: 504 DTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDKSSTAFGIRSWDFSALLMKIPSYS 563
+ +LP PS KA+ S TE ++ L +S G DF L IP +
Sbjct: 528 KSLLLPAPSQKALP----------TSPTEYQMALSPPASR--GKLPGDFDVLPTGIPGRA 575
Query: 564 PISLS---GLPE 572
+ S G PE
Sbjct: 576 VLERSQSGGKPE 587
>gi|55770872 l(3)mbt-like 3 isoform b [Homo sapiens]
Length = 755
Score = 38.5 bits (88), Expect = 0.017
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 13 FEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPL 68
F +G +LEA+D + D + + LVHF+ W YD W S + P+
Sbjct: 346 FRVGMKLEAVDKKNPSFICVATVTDMVDNRFLVHFDNWDESYDYWCEASSPHIHPV 401
Score = 35.0 bits (79), Expect = 0.19
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 4 KPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSN 63
KPP+ F+ +LE +D + D ++ ++ VHF+ W++ YD WI DS
Sbjct: 445 KPPHG----FQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSP 500
Query: 64 RLRPL 68
+ P+
Sbjct: 501 DIHPV 505
>gi|55770870 l(3)mbt-like 3 isoform a [Homo sapiens]
Length = 780
Score = 38.5 bits (88), Expect = 0.017
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 13 FEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPL 68
F +G +LEA+D + D + + LVHF+ W YD W S + P+
Sbjct: 371 FRVGMKLEAVDKKNPSFICVATVTDMVDNRFLVHFDNWDESYDYWCEASSPHIHPV 426
Score = 35.0 bits (79), Expect = 0.19
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 4 KPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSN 63
KPP+ F+ +LE +D + D ++ ++ VHF+ W++ YD WI DS
Sbjct: 470 KPPHG----FQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSP 525
Query: 64 RLRPL 68
+ P+
Sbjct: 526 DIHPV 530
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,837,912
Number of Sequences: 37866
Number of extensions: 1275971
Number of successful extensions: 4827
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 4489
Number of HSP's gapped (non-prelim): 563
length of query: 573
length of database: 18,247,518
effective HSP length: 108
effective length of query: 465
effective length of database: 14,157,990
effective search space: 6583465350
effective search space used: 6583465350
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.