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Search of human proteins with 4557429
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4557429 CD3G antigen, gamma polypeptide precursor [Homo
sapiens]
(182 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4557429 CD3G antigen, gamma polypeptide precursor [Homo sapiens] 369 e-103
gi|4502669 CD3 antigen, delta subunit isoform A precursor [Homo ... 127 5e-30
gi|98985801 CD3 antigen, delta subunit isoform B precursor [Homo... 65 2e-11
gi|4502671 CD3E antigen, epsilon polypeptide precursor [Homo sap... 44 1e-04
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 38 0.005
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 38 0.005
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 38 0.005
gi|38158005 TYRO protein tyrosine kinase binding protein isoform... 37 0.012
gi|4507755 TYRO protein tyrosine kinase binding protein isoform ... 34 0.079
gi|148612793 carcinoembryonic antigen-related cell adhesion mole... 31 0.51
gi|118572606 hemicentin 1 [Homo sapiens] 30 1.1
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 30 1.1
gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo s... 29 2.0
gi|145386566 zinc finger protein 148 [Homo sapiens] 28 5.7
gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo ... 28 5.7
gi|67782356 corneodesmosin precursor [Homo sapiens] 27 7.4
gi|110349719 titin isoform N2-A [Homo sapiens] 27 9.7
gi|110349717 titin isoform novex-2 [Homo sapiens] 27 9.7
gi|110349713 titin isoform novex-1 [Homo sapiens] 27 9.7
gi|110349715 titin isoform N2-B [Homo sapiens] 27 9.7
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact... 27 9.7
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 27 9.7
gi|9257257 WD repeat-containing protein 1 isoform 1 [Homo sapiens] 27 9.7
>gi|4557429 CD3G antigen, gamma polypeptide precursor [Homo sapiens]
Length = 182
Score = 369 bits (947), Expect = e-103
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MEQGKGLAVLILAIILLQGTLAQSIKGNHLVKVYDYQEDGSVLLTCDAEAKNITWFKDGK 60
MEQGKGLAVLILAIILLQGTLAQSIKGNHLVKVYDYQEDGSVLLTCDAEAKNITWFKDGK
Sbjct: 1 MEQGKGLAVLILAIILLQGTLAQSIKGNHLVKVYDYQEDGSVLLTCDAEAKNITWFKDGK 60
Query: 61 MIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMCQNCIELNAATISGFLF 120
MIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMCQNCIELNAATISGFLF
Sbjct: 61 MIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMCQNCIELNAATISGFLF 120
Query: 121 AEIVSIFVLAVGVYFIAGQDGVRQSRASDKQTLLPNDQLYQPLKDREDDQYSHLQGNQLR 180
AEIVSIFVLAVGVYFIAGQDGVRQSRASDKQTLLPNDQLYQPLKDREDDQYSHLQGNQLR
Sbjct: 121 AEIVSIFVLAVGVYFIAGQDGVRQSRASDKQTLLPNDQLYQPLKDREDDQYSHLQGNQLR 180
Query: 181 RN 182
RN
Sbjct: 181 RN 182
>gi|4502669 CD3 antigen, delta subunit isoform A precursor [Homo
sapiens]
Length = 171
Score = 127 bits (319), Expect = 5e-30
Identities = 71/183 (38%), Positives = 110/183 (60%), Gaps = 17/183 (9%)
Query: 1 MEQGKGLAVLILAIILLQGTLAQSIKGNHLVKVYDYQEDGSVLLTCDAEAKNITWFKDGK 60
ME L+ L+LA +L Q + K+ + + V + C+ +ITW +
Sbjct: 1 MEHSTFLSGLVLATLLSQVSP---------FKIPIEELEDRVFVNCNT---SITWVEG-- 46
Query: 61 MIGFLTEDKKKWNLGSNAKDPRGMYQCKGS---QNKSKPLQVYYRMCQNCIELNAATISG 117
+G L D + +LG DPRG+Y+C G+ ++K +QV+YRMCQ+C+EL+ AT++G
Sbjct: 47 TVGTLLSDITRLDLGKRILDPRGIYRCNGTDIYKDKESTVQVHYRMCQSCVELDPATVAG 106
Query: 118 FLFAEIVSIFVLAVGVYFIAGQDGVRQSRASDKQTLLPNDQLYQPLKDREDDQYSHLQGN 177
+ ++++ +LA+GV+ AG + R S A+D Q LL NDQ+YQPL+DR+D QYSHL GN
Sbjct: 107 IIVTDVIATLLLALGVFCFAGHETGRLSGAADTQALLRNDQVYQPLRDRDDAQYSHLGGN 166
Query: 178 QLR 180
R
Sbjct: 167 WAR 169
>gi|98985801 CD3 antigen, delta subunit isoform B precursor [Homo
sapiens]
Length = 127
Score = 65.5 bits (158), Expect = 2e-11
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 61/183 (33%)
Query: 1 MEQGKGLAVLILAIILLQGTLAQSIKGNHLVKVYDYQEDGSVLLTCDAEAKNITWFKDGK 60
ME L+ L+LA +L Q + K+ + + V + C+ +ITW +
Sbjct: 1 MEHSTFLSGLVLATLLSQVSP---------FKIPIEELEDRVFVNCNT---SITWVEG-- 46
Query: 61 MIGFLTEDKKKWNLGSNAKDPRGMYQCKGS---QNKSKPLQVYYRMCQNCIELNAATISG 117
+G L D + +LG DPRG+Y+C G+ ++K +QV+YR
Sbjct: 47 TVGTLLSDITRLDLGKRILDPRGIYRCNGTDIYKDKESTVQVHYR--------------- 91
Query: 118 FLFAEIVSIFVLAVGVYFIAGQDGVRQSRASDKQTLLPNDQLYQPLKDREDDQYSHLQGN 177
+D Q LL NDQ+YQPL+DR+D QYSHL GN
Sbjct: 92 -----------------------------TADTQALLRNDQVYQPLRDRDDAQYSHLGGN 122
Query: 178 QLR 180
R
Sbjct: 123 WAR 125
>gi|4502671 CD3E antigen, epsilon polypeptide precursor [Homo
sapiens]
Length = 207
Score = 43.5 bits (101), Expect = 1e-04
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 33/168 (19%)
Query: 41 SVLLTCDA-EAKNITWFKDGKMIGFLTEDKKKWNLGSNAK----------DPRGMYQC-- 87
+V+LTC I W + K IG +DK N+GS+ + G Y C
Sbjct: 44 TVILTCPQYPGSEILWQHNDKNIGGDEDDK---NIGSDEDHLSLKEFSELEQSGYYVCYP 100
Query: 88 KGSQNKSKPLQVYYR--MCQNCIELNAATISGFLFAEIVSIFVLAVGVYFI--------- 136
+GS+ + +Y R +C+NC+E++ +++ + +I L + VY+
Sbjct: 101 RGSKPEDANFYLYLRARVCENCMEMDVMSVATIVIVDICITGGLLLLVYYWSKNRKAKAK 160
Query: 137 -----AGQDGVRQSRASDKQTLLPNDQLYQPLKDREDDQYSHLQGNQL 179
AG G ++ + ++ +PN Y+P++ + D YS L ++
Sbjct: 161 PVTRGAGAGGRQRGQNKERPPPVPNPD-YEPIRKGQRDLYSGLNQRRI 207
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 37.7 bits (86), Expect = 0.005
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 38 EDGSVLLTCDAEA---KNITWFKDGKMIG-----FLTEDKKKWNLGSNAKDPRGMYQCK- 88
ED V L C+A NITWFKDG ++ T ++ LG G+Y CK
Sbjct: 325 EDHLVQLLCEARGVPTPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAGVYTCKA 384
Query: 89 ----GSQNKSKPLQVY 100
G+ K+ L VY
Sbjct: 385 SNAVGAAEKATRLDVY 400
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 37.7 bits (86), Expect = 0.005
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 38 EDGSVLLTCDAEA---KNITWFKDGKMIG-----FLTEDKKKWNLGSNAKDPRGMYQCK- 88
ED V L C+A NITWFKDG ++ T ++ LG G+Y CK
Sbjct: 1516 EDHLVQLLCEARGVPTPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAGVYTCKA 1575
Query: 89 ----GSQNKSKPLQVY 100
G+ K+ L VY
Sbjct: 1576 SNAVGAAEKATRLDVY 1591
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 37.7 bits (86), Expect = 0.005
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 38 EDGSVLLTCDAEA---KNITWFKDGKMIG-----FLTEDKKKWNLGSNAKDPRGMYQCK- 88
ED V L C+A NITWFKDG ++ T ++ LG G+Y CK
Sbjct: 234 EDHLVQLLCEARGVPTPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAGVYTCKA 293
Query: 89 ----GSQNKSKPLQVY 100
G+ K+ L VY
Sbjct: 294 SNAVGAAEKATRLDVY 309
>gi|38158005 TYRO protein tyrosine kinase binding protein isoform 2
precursor [Homo sapiens]
Length = 112
Score = 36.6 bits (83), Expect = 0.012
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 95 KPLQVYYRMCQNCIELNAATISGFLFAEIVSIFVLAVGVYFIAG--QDGVRQSRASDKQT 152
+P+Q + +C ++ ++G + ++V ++A+ VYF+ G + A+ KQ
Sbjct: 23 RPVQAQAQSDCSCSTVSPGVLAGIVMGDLVLTVLIALAVYFLGRLVPRGRGAAEATRKQR 82
Query: 153 LLPNDQLYQPLKDREDDQYSHL 174
+ + YQ L+ + D YS L
Sbjct: 83 ITETESPYQELQGQRSDVYSDL 104
>gi|4507755 TYRO protein tyrosine kinase binding protein isoform 1
precursor [Homo sapiens]
Length = 113
Score = 33.9 bits (76), Expect = 0.079
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 95 KPLQVYYRMCQNCIELNAATISGFLFAEIVSIFVLAVGVYF---IAGQDGVRQSRASDKQ 151
+P+Q + +C ++ ++G + ++V ++A+ VYF + + A+ KQ
Sbjct: 23 RPVQAQAQSDCSCSTVSPGVLAGIVMGDLVLTVLIALAVYFLGRLVPRGRGAAEAATRKQ 82
Query: 152 TLLPNDQLYQPLKDREDDQYSHL 174
+ + YQ L+ + D YS L
Sbjct: 83 RITETESPYQELQGQRSDVYSDL 105
>gi|148612793 carcinoembryonic antigen-related cell adhesion
molecule isoform 1 [Homo sapiens]
Length = 293
Score = 31.2 bits (69), Expect = 0.51
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
Query: 38 EDGSVLLTCDAE--AKNITWFKDGKMIGFLTEDKKKW-----NLGSNAKDPRGMYQCKGS 90
E GSV+LTC + W + + + K W + ++ G YQC+ S
Sbjct: 158 EKGSVVLTCHTNNTGTSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDAGEYQCEVS 217
Query: 91 Q----NKSKPLQVYYRMCQNCIELNAATISGFLFAEIVSIFVL 129
N+S PL++ + N + + + G L + F+L
Sbjct: 218 NPVSSNRSDPLKLTVKSDDNTLGILIGVLVGSLLVAALVCFLL 260
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 30.0 bits (66), Expect = 1.1
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 24 SIKGNHLV-KVYDYQEDGSVLLTCDAEA---KNITWFKDG 59
SI GNH + E SV LTC+A +ITWFKDG
Sbjct: 2385 SIIGNHRSPENISVVEKNSVSLTCEASGIPLPSITWFKDG 2424
Score = 30.0 bits (66), Expect = 1.1
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 31 VKVYDYQEDGSVLLTCDAEAKN---ITWFKDGKMIGFLTE-----DKKKWNLGSNAKDPR 82
+ V + +E SV L C++ A ITW+K+G+MI T D + ++
Sbjct: 3066 LSVVNVREGTSVSLECESNAVPPPVITWYKNGRMITESTHVEILADGQMLHIKKAEVSDT 3125
Query: 83 GMYQCK-----GSQNKSKPLQVY 100
G Y C+ G +K+ L VY
Sbjct: 3126 GQYVCRAINVAGRDDKNFHLNVY 3148
Score = 26.9 bits (58), Expect = 9.7
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 14/73 (19%)
Query: 42 VLLTCDAEAK---NITWFKDGKMIGF------LTEDKKKWNLGSNAKDPRGMYQC----- 87
V L C + +I WFKDGK + L + + +L + ++ +G YQC
Sbjct: 1471 VALECQVKGTPFPDIHWFKDGKPLFLGDPNVELLDRGQVLHLKNARRNDKGRYQCTVSNA 1530
Query: 88 KGSQNKSKPLQVY 100
G Q K L +Y
Sbjct: 1531 AGKQAKDIKLTIY 1543
Score = 26.9 bits (58), Expect = 9.7
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 31 VKVYDYQEDGSVLLTCDAEA---KNITWFKDGKMI 62
+K Y D + L+C+A+ +ITW KDG+ I
Sbjct: 4085 LKEYVIAVDKPITLSCEADGLPPPDITWHKDGRAI 4119
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 30.0 bits (66), Expect = 1.1
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 37 QEDGSVLLTCDAEAKN---ITWFKDGKMIGFLTE---DKKKWNLGSNAKDPRGMYQCKGS 90
+E GS+ +TC A +TW K+G ++G + + S +++ RG Y C+
Sbjct: 152 KEGGSITMTCTAFGNPKPIVTWLKEGTLLGASGKYQVSDGSLTVTSVSREDRGAYTCRAY 211
Query: 91 QNKSKPLQVYYRMCQ 105
+ + + + + Q
Sbjct: 212 SIQGEAVHTTHLLVQ 226
>gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo
sapiens]
Length = 514
Score = 29.3 bits (64), Expect = 2.0
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 7/77 (9%)
Query: 6 GLAVLILAIILLQGTLAQSIKGNHLVKVYDYQEDGSVLLTCDAEAKNITWFKDGKMIGFL 65
G L+L + +G Q + N V D+ +G++L T + W KDG + L
Sbjct: 205 GSTQLVLRHCIREG--GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTL 262
Query: 66 TEDK-----KKWNLGSN 77
+ K KWN N
Sbjct: 263 GQHKGPIFALKWNKKGN 279
>gi|145386566 zinc finger protein 148 [Homo sapiens]
Length = 794
Score = 27.7 bits (60), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 139 QDGVRQSRASDKQTLLPNDQLYQPLKDREDDQYSH 173
QD V Q R+ Q +L D++ Q + R+ D SH
Sbjct: 43 QDSVLQDRSMPHQEILAADEVLQESEMRQQDMISH 77
>gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo
sapiens]
Length = 1386
Score = 27.7 bits (60), Expect = 5.7
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 17/61 (27%)
Query: 44 LTCDAEAK---NITWFKDGKMIGFLTEDKKKWNL--------------GSNAKDPRGMYQ 86
L C AE + NI W+K+G + + ED + L G A+ G+Y
Sbjct: 83 LPCRAEGRPRPNIEWYKNGARVATVREDPRAHRLLLPSGALFFPRIVHGRRARPDEGVYT 142
Query: 87 C 87
C
Sbjct: 143 C 143
>gi|67782356 corneodesmosin precursor [Homo sapiens]
Length = 529
Score = 27.3 bits (59), Expect = 7.4
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 4 GKGLAVLILAIILLQGTLAQSI 25
G G+ L+LA +LL GTLA+SI
Sbjct: 14 GHGMMALLLAGLLLPGTLAKSI 35
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 26.9 bits (58), Expect = 9.7
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 5/24 (20%)
Query: 44 LTCDAE-----AKNITWFKDGKMI 62
LTC E AK +TW+KDGK +
Sbjct: 32735 LTCVVESSVLRAKEVTWYKDGKKL 32758
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 26.9 bits (58), Expect = 9.7
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 5/24 (20%)
Query: 44 LTCDAE-----AKNITWFKDGKMI 62
LTC E AK +TW+KDGK +
Sbjct: 26430 LTCVVESSVLRAKEVTWYKDGKKL 26453
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 26.9 bits (58), Expect = 9.7
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 5/24 (20%)
Query: 44 LTCDAE-----AKNITWFKDGKMI 62
LTC E AK +TW+KDGK +
Sbjct: 26363 LTCVVESSVLRAKEVTWYKDGKKL 26386
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 26.9 bits (58), Expect = 9.7
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 5/24 (20%)
Query: 44 LTCDAE-----AKNITWFKDGKMI 62
LTC E AK +TW+KDGK +
Sbjct: 26238 LTCVVESSVLRAKEVTWYKDGKKL 26261
>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform a [Homo sapiens]
Length = 6620
Score = 26.9 bits (58), Expect = 9.7
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 38 EDGSVLLTCDAEAKNITWFKDGKMIGFLTEDKKKWNLGSN-------AKDPRGMYQC 87
E+ +L +A +TW KDG+ + + + + + G A+D G+Y+C
Sbjct: 722 EEAQLLAELSDQAAAVTWLKDGRTLSPGPKYEVQASAGRRVLLVRDVARDDAGLYEC 778
>gi|148833506 obscurin, cytoskeletal calmodulin and
titin-interacting RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 26.9 bits (58), Expect = 9.7
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 38 EDGSVLLTCDAEAKNITWFKDGKMIGFLTEDKKKWNLGSN-------AKDPRGMYQC 87
E+ +L +A +TW KDG+ + + + + + G A+D G+Y+C
Sbjct: 722 EEAQLLAELSDQAAAVTWLKDGRTLSPGPKYEVQASAGRRVLLVRDVARDDAGLYEC 778
>gi|9257257 WD repeat-containing protein 1 isoform 1 [Homo sapiens]
Length = 606
Score = 26.9 bits (58), Expect = 9.7
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Query: 29 HLVKVYDYQEDGSVLLTCDAEAKNITWFKDGKMIGFLTEDKKK------WNLGSNAKDPR 82
HL+K Y+YQ + K+I W +D K I + E ++K W+ GS+ +
Sbjct: 92 HLLK-YEYQPFAGKI-------KDIAWTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEIT 143
Query: 83 GMYQCKGSQN--KSKPLQVYYRMCQNC 107
G + S + +S+P ++ NC
Sbjct: 144 GHNKVINSVDIKQSRPYRLATGSDDNC 170
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,406,127
Number of Sequences: 37866
Number of extensions: 252238
Number of successful extensions: 693
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 609
Number of HSP's gapped (non-prelim): 99
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.