Guide to the Human Genome
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Name: ZNF148 Sequence: fasta or formatted (794aa) NCBI GI: 145386566
Description:

zinc finger protein 148

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         44           2
 C cysteine            1.4         11           1
 D aspartate           6.3         50           2
 E glutamate           7.3         58           2
 F phenylalanine       3.4         27           1
 G glycine             4.8         38           2
 H histidine           3.8         30           1
 I isoleucine          3.8         30           1
 K lysine              7.7         61           4
 L leucine             7.3         58           2
 M methionine          2.9         23           1
 N asparagine          4.8         38           2
 P proline             4.5         36           2
 Q glutamine           7.2         57           2
 R arginine            3.9         31           1
 S serine             11.5         91           3
 T threonine           5.7         45           2
 V valine              5.5         44           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.8         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 148 
ZNF281                0.240   zinc finger protein 281 
ZNF740                0.078   zinc finger protein 740 
ZFP3                  0.065   zinc finger protein-3 
ZNF468                0.065   zinc finger protein ZNF468 isoform 1 
ZNF468                0.065   zinc finger protein ZNF468 isoform 2 
ZNF471                0.064   zinc finger protein 471 
ZNF75D                0.064   zinc finger protein 75 
ZNF681                0.064   zinc finger protein 681 
ZNF527                0.064   zinc finger protein 527 
ZFP28                 0.064   zinc finger protein 28 
ZNF180                0.063   zinc finger protein 180 
ZNF107                0.063   zinc finger protein 107 
ZNF107                0.063   zinc finger protein 107 
ZNF93                 0.063   zinc finger protein 93 
ZNF253                0.063   zinc finger protein 253 
ZNF600                0.063   zinc finger protein 600 
ZNF765                0.063   zinc finger protein 765 
ZNF429                0.063   zinc finger protein 429 
ZNF678                0.063   zinc finger protein 678 
ZNF34                 0.063   zinc finger protein 34 
ZNF594                0.063   zinc finger protein 594 
ZNF708                0.062   zinc finger protein 708 
ZNF92                 0.062   zinc finger protein 92 isoform 1 
ZNF92                 0.062   zinc finger protein 92 isoform 2 
ZNF22                 0.062   zinc finger protein 22 (KOX 15) 
ZNF544                0.062   zinc finger protein 544 
ZNF184                0.062   zinc finger protein 184 
ZFP112                0.062   zinc finger protein 228 isoform 1 
ZFP112                0.062   zinc finger protein 228 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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