Guide to the Human Genome
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Name: CD3D Sequence: fasta or formatted (127aa) NCBI GI: 98985801
Description:

CD3 antigen, delta subunit isoform B precursor

Referenced in:

T cells

Other entries for this name:
alt prot [171aa] CD3 antigen, delta subunit isoform A precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          5           1
 C cysteine            1.6          2           1
 D aspartate           8.7         11           2
 E glutamate           4.7          6           2
 F phenylalanine       2.4          3           1
 G glycine             6.3          8           2
 H histidine           2.4          3           1
 I isoleucine          5.5          7           1
 K lysine              3.9          5           1
 L leucine            11.8         15           2
 M methionine          0.8          1           1
 N asparagine          4.7          6           1
 P proline             3.1          4           1
 Q glutamine           4.7          6           1
 R arginine            7.9         10           1
 S serine              6.3          8           1
 T threonine           8.7         11           1
 V valine              7.1          9           1
 W tryptophan          1.6          2           1
 Y tyrosine            3.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD3 antigen, delta subunit isoform B precursor [Homo... 
CD3D                  0.903   CD3 antigen, delta subunit isoform A precursor 
CD3G                  0.169   CD3G antigen, gamma polypeptide precursor 
CRY1                  0.013   cryptochrome 1 (photolyase-like) 
BSG                   0.008   basigin isoform 1 precursor 
BSG                   0.008   basigin isoform 4 
BSG                   0.008   basigin isoform 2 precursor 
HSPG2                 0.004   heparan sulfate proteoglycan 2 
LRMP                  0.004   lymphoid-restricted membrane protein 
ACAN                  0.004   aggrecan isoform 2 precursor 
ACAN                  0.004   aggrecan isoform 1 precursor 
FRAS1                 0.004   Fraser syndrome 1 
CNTLN                 0.004   centlein isoform 1 
CNTLN                 0.004   centlein isoform 2 
ZNF667                0.004   zinc finger protein 667 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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