Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 45446752
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45446752 aquaporin 8 [Homo sapiens]
(261 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45446752 aquaporin 8 [Homo sapiens] 526 e-150
gi|4502183 aquaporin 5 [Homo sapiens] 129 2e-30
gi|4502179 aquaporin 2 [Homo sapiens] 119 2e-27
gi|4755125 aquaporin 4 isoform b [Homo sapiens] 117 8e-27
gi|4502181 aquaporin 4 isoform a [Homo sapiens] 117 8e-27
gi|6912506 major intrinsic protein of lens fiber [Homo sapiens] 112 2e-25
gi|86792455 aquaporin 6 [Homo sapiens] 108 6e-24
gi|37694062 aquaporin 1 [Homo sapiens] 99 4e-21
gi|157266307 aquaporin 9 [Homo sapiens] 81 8e-16
gi|4826645 aquaporin 3 [Homo sapiens] 77 2e-14
gi|4502187 aquaporin 7 [Homo sapiens] 58 7e-09
gi|22538420 aquaporin 10 [Homo sapiens] 53 2e-07
gi|156447037 aquaporin 12B [Homo sapiens] 38 0.010
gi|40538880 aquaporin 12A [Homo sapiens] 37 0.023
gi|27370565 aquaporin 11 [Homo sapiens] 36 0.030
gi|6912666 sialin [Homo sapiens] 34 0.15
gi|83921614 cytochrome b5 outer mitochondrial membrane precursor... 30 2.8
gi|197100650 NTPase, KAP family P-loop domain containing 1 isofo... 29 3.6
gi|115647960 NTPase, KAP family P-loop domain containing 1 isofo... 29 3.6
gi|115511028 transmembrane 4 L six family member 19 [Homo sapiens] 29 3.6
gi|117968621 MACRO domain containing 2 isoform 1 [Homo sapiens] 29 4.7
gi|4505697 pendrin [Homo sapiens] 28 6.2
gi|110431350 endo-beta-N-acetylglucosaminidase [Homo sapiens] 28 6.2
gi|73611906 phosphorylase kinase, beta isoform b [Homo sapiens] 28 8.1
gi|4505783 phosphorylase kinase, beta isoform a [Homo sapiens] 28 8.1
>gi|45446752 aquaporin 8 [Homo sapiens]
Length = 261
Score = 526 bits (1356), Expect = e-150
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MSGEIAMCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIENG 60
MSGEIAMCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIENG
Sbjct: 1 MSGEIAMCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIENG 60
Query: 61 TDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLG 120
TDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLG
Sbjct: 61 TDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLG 120
Query: 121 GMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEK 180
GMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEK
Sbjct: 121 GMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEK 180
Query: 181 TKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLL 240
TKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLL
Sbjct: 181 TKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLL 240
Query: 241 VGLLIRCFIGDGKTRLILKAR 261
VGLLIRCFIGDGKTRLILKAR
Sbjct: 241 VGLLIRCFIGDGKTRLILKAR 261
>gi|4502183 aquaporin 5 [Homo sapiens]
Length = 265
Score = 129 bits (325), Expect = 2e-30
Identities = 80/215 (37%), Positives = 124/215 (57%), Gaps = 8/215 (3%)
Query: 34 FVQPCLVELLGSALFIFIGCLSVIE--NGTDTGLLQPALAHGLALGLVIATLGNISGGHF 91
F++ E L + +F+F G S ++ + T +LQ ALA GLA+G + LG +SGGH
Sbjct: 10 FLKAVFAEFLATLIFVFFGLGSALKWPSALPT-ILQIALAFGLAIGTLAQALGPVSGGHI 68
Query: 92 NPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQ 151
NPA++LA ++ ++L+ Y +QL+G + GA + V+P N + A Q
Sbjct: 69 NPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQ 128
Query: 152 GQVAGALVAEIILTTLLALAVCMGAINEKTKGPLAP-FSIGFAVTVDILAGGPVSGGCMN 210
GQ A+V E+ILT LAL + + +T +P SIG +VT+ L G +G MN
Sbjct: 129 GQ---AMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMN 185
Query: 211 PARAFGPAVVANHWN-FHWIYWLGPLLAGLLVGLL 244
PAR+FGPAVV N ++ HW++W+GP++ +L +L
Sbjct: 186 PARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAIL 220
>gi|4502179 aquaporin 2 [Homo sapiens]
Length = 271
Score = 119 bits (299), Expect = 2e-27
Identities = 74/214 (34%), Positives = 113/214 (52%), Gaps = 7/214 (3%)
Query: 34 FVQPCLVELLGSALFIFIGCLSVIE-NGTDTGLLQPALAHGLALGLVIATLGNISGGHFN 92
F + E L + LF+F G S + +LQ A+A GL +G ++ LG+ISG H N
Sbjct: 9 FSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHIN 68
Query: 93 PAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQG 152
PAV++A ++ ++++ Y +QLLG + GAAL ++P + G V
Sbjct: 69 PAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPAD----IRGDLAVNALSNS 124
Query: 153 QVAG-ALVAEIILTTLLALAVCMGAINEKTKGPLAP-FSIGFAVTVDILAGGPVSGGCMN 210
AG A+ E+ LT L L + + + P P SIGF+V + L G +G MN
Sbjct: 125 TTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCSMN 184
Query: 211 PARAFGPAVVANHWNFHWIYWLGPLLAGLLVGLL 244
PAR+ PAVV ++ HW++W+GPL+ +L LL
Sbjct: 185 PARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLL 218
>gi|4755125 aquaporin 4 isoform b [Homo sapiens]
Length = 301
Score = 117 bits (294), Expect = 8e-27
Identities = 74/221 (33%), Positives = 116/221 (52%), Gaps = 13/221 (5%)
Query: 30 WYERFVQPCLVELLGSALFIFIGCLSVIE-NGTDTGLLQPALAHGLALGLVIATL----G 84
W + F + E L +F+ + S I GT+ L + L GL IAT+ G
Sbjct: 8 WTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFG 67
Query: 85 NISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAA 144
+ISGGH NPAV++A + +++ + Y +Q LG ++GA + V+P + G
Sbjct: 68 HISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP----SVVGGL 123
Query: 145 FVTVQEQGQVAG-ALVAEIILTTLLALAVCMGAINEKTK--GPLAPFSIGFAVTVDILAG 201
VT+ AG L+ E+I+T L + +++T G +A +IGF+V + L
Sbjct: 124 GVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFA 182
Query: 202 GPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLLVG 242
+G MNPAR+FGPAV+ +W HWIYW+GP++ +L G
Sbjct: 183 INYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAG 223
>gi|4502181 aquaporin 4 isoform a [Homo sapiens]
Length = 323
Score = 117 bits (294), Expect = 8e-27
Identities = 74/221 (33%), Positives = 116/221 (52%), Gaps = 13/221 (5%)
Query: 30 WYERFVQPCLVELLGSALFIFIGCLSVIE-NGTDTGLLQPALAHGLALGLVIATL----G 84
W + F + E L +F+ + S I GT+ L + L GL IAT+ G
Sbjct: 30 WTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFG 89
Query: 85 NISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAA 144
+ISGGH NPAV++A + +++ + Y +Q LG ++GA + V+P + G
Sbjct: 90 HISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP----SVVGGL 145
Query: 145 FVTVQEQGQVAG-ALVAEIILTTLLALAVCMGAINEKTK--GPLAPFSIGFAVTVDILAG 201
VT+ AG L+ E+I+T L + +++T G +A +IGF+V + L
Sbjct: 146 GVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFA 204
Query: 202 GPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLLVG 242
+G MNPAR+FGPAV+ +W HWIYW+GP++ +L G
Sbjct: 205 INYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAG 245
>gi|6912506 major intrinsic protein of lens fiber [Homo sapiens]
Length = 263
Score = 112 bits (281), Expect = 2e-25
Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 7/214 (3%)
Query: 34 FVQPCLVELLGSALFIFIGCLSVIENGTDT-GLLQPALAHGLALGLVIATLGNISGGHFN 92
F + E + ++F G S + +LQ A+A GLAL ++ ++G+ISG H N
Sbjct: 9 FWRAIFAEFFATLFYVFFGLGSSLRWAPGPLHVLQVAMAFGLALATLVQSVGHISGAHVN 68
Query: 93 PAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQG 152
PAV+ A ++ ++L+ Y +QLLG + GAA+ +V+P N A T+
Sbjct: 69 PAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGN---LALNTLHPAV 125
Query: 153 QVAGALVAEIILTTLLALAVCMGAINEKTKGPL--APFSIGFAVTVDILAGGPVSGGCMN 210
V A EI LT L + +E+ G L ++GF++ + L G +G MN
Sbjct: 126 SVGQATTVEIFLTLQFVLCI-FATYDERRNGQLGSVALAVGFSLALGHLFGMYYTGAGMN 184
Query: 211 PARAFGPAVVANHWNFHWIYWLGPLLAGLLVGLL 244
PAR+F PA++ ++ HW+YW+GP++ G L LL
Sbjct: 185 PARSFAPAILTGNFTNHWVYWVGPIIGGGLGSLL 218
>gi|86792455 aquaporin 6 [Homo sapiens]
Length = 282
Score = 108 bits (269), Expect = 6e-24
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 5/205 (2%)
Query: 41 ELLGSALFIFIGCLSVIENGTDT-GLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAA 99
E L + L++F G SV+ T +LQ A+ L + + SG H NPAV+LA
Sbjct: 30 EFLATGLYVFFGVGSVMRWPTALPSVLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAF 89
Query: 100 MLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALV 159
++ ++L + Y +QL+G +GAAL V P + V+ A+
Sbjct: 90 LVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDI---RETLGINVVRNSVSTGQAVA 146
Query: 160 AEIILTTLLALAVCMGAINEKTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAV 219
E++LT L L V + +T G A IG +V + L G +G MNPAR+FGPA+
Sbjct: 147 VELLLTLQLVLCVFASTDSRQTSGSPATM-IGISVALGHLIGIHFTGCSMNPARSFGPAI 205
Query: 220 VANHWNFHWIYWLGPLLAGLLVGLL 244
+ + HW++W+GPL+ LL L+
Sbjct: 206 IIGKFTVHWVFWVGPLMGALLASLI 230
>gi|37694062 aquaporin 1 [Homo sapiens]
Length = 269
Score = 99.0 bits (245), Expect = 4e-21
Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 16/222 (7%)
Query: 34 FVQPCLVELLGSALFIFIGCLSVI----ENGTDTGLLQPALAHGLALGLVIATL----GN 85
F + + E L + LF+FI S + G + +Q + LA GL IATL G+
Sbjct: 10 FWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGH 69
Query: 86 ISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAF 145
ISG H NPAV+L +L +++ L Y ++Q +G ++ A+ ++ +
Sbjct: 70 ISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDL 129
Query: 146 VTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTK---GPLAPFSIGFAVTVDILAGG 202
GQ G EII T L L +C+ A ++ + G AP +IG +V + L
Sbjct: 130 ADGVNSGQGLGI---EIIGT--LQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAI 184
Query: 203 PVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLLVGLL 244
+G +NPAR+FG AV+ ++++ HWI+W+GP + G L L+
Sbjct: 185 DYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLI 226
>gi|157266307 aquaporin 9 [Homo sapiens]
Length = 295
Score = 81.3 bits (199), Expect = 8e-16
Identities = 65/235 (27%), Positives = 101/235 (42%), Gaps = 29/235 (12%)
Query: 39 LVELLGSALFIFIGC----LSVIENGTDTGLLQPALAHGLALGLVIATLGNISGGHFNPA 94
L E LG+ + I +GC +++ G G++ + +A+ + I G +SGGH NPA
Sbjct: 27 LSEFLGTFILIVLGCGCVAQAILSRGRFGGVITINVGFSMAVAMAIYVAGGVSGGHINPA 86
Query: 95 VSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERF-----------WNASGA 143
VSLA L G + L Y +Q LG +GAA + + NA+
Sbjct: 87 VSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAGGKLLIVGENATAH 146
Query: 144 AFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTKGP---LAPFSIGFAVTVDILA 200
F T A+ ++ T++ L + + + G L P +IG + V +
Sbjct: 147 IFATYPAPYLSLANAFADQVVATMILLIIVFAIFDSRNLGAPRGLEPIAIGLLIIVIASS 206
Query: 201 GGPVSGGCMNPARAFGPAV--VANHW---------NFHWIYWLGPLLAGLLVGLL 244
G SG MNPAR P + W NF WI +GPL+ ++ GL+
Sbjct: 207 LGLNSGCAMNPARDLSPRLFTALAGWGFEVFRAGNNFWWIPVVGPLVGAVIGGLI 261
>gi|4826645 aquaporin 3 [Homo sapiens]
Length = 292
Score = 77.0 bits (188), Expect = 2e-14
Identities = 75/253 (29%), Positives = 108/253 (42%), Gaps = 39/253 (15%)
Query: 33 RFVQPCLVELLGSALFIFIGCLSV----IENGTDTGLLQPALAHGLALGLVIATLGNISG 88
R ++ L E LG+ + + GC SV + GT G L LA G A+ L I G +SG
Sbjct: 20 RLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILIAGQVSG 79
Query: 89 GHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFW---------- 138
H NPAV+ A + + L Y ++Q LG LGA + + + W
Sbjct: 80 AHLNPAVTFAMCFLAREPWIKLPIYTLAQTLGAFLGAGIVFGLY-YDAIWHFADNQLFVS 138
Query: 139 --NASGAAFVTVQE-QGQVAGALVAEIILTTLLALAVCMGAINEKTKGP----LAPFSIG 191
N + F T + + I T +L VC+ AI + P L F++G
Sbjct: 139 GPNGTAGIFATYPSGHLDMINGFFDQFIGTA--SLIVCVLAIVDPYNNPVPRGLEAFTVG 196
Query: 192 FAVTVDILAGGPVSGGCMNPARAFGP-----------AVVANHWNFHWIYWLGPLL---A 237
V V + G SG +NPAR FGP AV ++ W+ + PLL A
Sbjct: 197 LVVLVIGTSMGFNSGYAVNPARDFGPRLFTALAGWGSAVFTTGQHWWWVPIVSPLLGSIA 256
Query: 238 GLLV-GLLIRCFI 249
G+ V L+I C +
Sbjct: 257 GVFVYQLMIGCHL 269
>gi|4502187 aquaporin 7 [Homo sapiens]
Length = 342
Score = 58.2 bits (139), Expect = 7e-09
Identities = 68/261 (26%), Positives = 103/261 (39%), Gaps = 40/261 (15%)
Query: 33 RFVQPCLVELLGSALFIFIGCLSV---IENGTDTGLLQPALAHGLALGLVIATLGNISGG 89
+ V+ L E + + + + G SV + N L L G + + + G ISG
Sbjct: 32 KMVREFLAEFMSTYVMMVFGLGSVAHMVLNKKYGSYLGVNLGFGFGVTMGVHVAGRISGA 91
Query: 90 HFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQ 149
H N AV+ A +G + Y + Q LG L AA ++ + G VT
Sbjct: 92 HMNAAVTFANCALGRVPWRKFPVYVLGQFLGSFLAAATIYSLFYTAILHFSGGQLMVT-- 149
Query: 150 EQGQVAGA----------------LVAEIILTTLLALAVCMGAINEKTKGPLAP----FS 189
G VA A + E LT +L L C+ AI ++ P P
Sbjct: 150 --GPVATAGIFATYLPDHMTLWRGFLNEAWLTGMLQL--CLFAITDQENNPALPGTEALV 205
Query: 190 IGFAVTVDILAGGPVSGGCMNPAR-----------AFGPAVVANHWNFHWIYWLGPLLAG 238
IG V + ++ G +G +NP+R +G V +N N+ W+ + PLL
Sbjct: 206 IGILVVIIGVSLGMNTGYAINPSRDLPPRIFTFIAGWGKQVFSNGENWWWVPVVAPLLGA 265
Query: 239 LLVGLLIRCFIGDGKTRLILK 259
L G++ FIG R LK
Sbjct: 266 YLGGIIYLVFIGSTIPREPLK 286
>gi|22538420 aquaporin 10 [Homo sapiens]
Length = 301
Score = 53.1 bits (126), Expect = 2e-07
Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 22/200 (11%)
Query: 38 CLVELLGSALFIFIG----CLSVIENGTDTGLLQPALAHGLALGLVIATLGNISGGHFNP 93
CL E LG + + + +V T LA LA+ + I GN+SG H NP
Sbjct: 24 CLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVGGNVSGAHLNP 83
Query: 94 AVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQ 153
A SLA ++G L V L Y + QLL A+ A V + N +G +TV +
Sbjct: 84 AFSLAMCIVGRLPWVKLPIYILVQLLSAFC-ASGATYVLYHDALQNYTGGN-LTVTGPKE 141
Query: 154 VAGALVA-------------EIILTTLLALAVCMGAINEKTKG---PLAPFSIGFAVTVD 197
A + +L T + + + ++ + KG L P +G +
Sbjct: 142 TASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVVVGMLILAL 201
Query: 198 ILAGGPVSGGCMNPARAFGP 217
L+ G G +NPAR GP
Sbjct: 202 GLSMGANCGIPLNPARDLGP 221
Score = 31.6 bits (70), Expect = 0.73
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 153 QVAGALVAEIILTTLLALAVCMGAINEKTKGPLAPFSIG--FAVTVDILAGGPVSGGCMN 210
Q + +L L AV + +TKG + AVT+ I GG VSG +N
Sbjct: 23 QCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVGGNVSGAHLN 82
Query: 211 PARAFGPAVVAN-HWNFHWIYWLGPLLA 237
PA + +V W IY L LL+
Sbjct: 83 PAFSLAMCIVGRLPWVKLPIYILVQLLS 110
>gi|156447037 aquaporin 12B [Homo sapiens]
Length = 307
Score = 37.7 bits (86), Expect = 0.010
Identities = 52/207 (25%), Positives = 74/207 (35%), Gaps = 20/207 (9%)
Query: 50 FIGCLSVIENGTDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVM 109
F+ +++E G G P L L L +A + G NP VSL L+ +L
Sbjct: 51 FLEMRTLVELGPWAGDFGPDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFLMAEESLPG 110
Query: 110 LLPYWVSQLLGGMLGAALAKAVSP---------EERFWNASGAAFVTVQEQGQVAGALVA 160
L +Q LG L + + + +A T G + A A
Sbjct: 111 TLLKLAAQGLGMQAACTLTRLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACA 170
Query: 161 EIILTTLLALAVCMGAINEKTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVV 220
TLL L A + GP ++ VTV GP + NPA A
Sbjct: 171 FCFHLTLLHLRHSPPAYS----GP----AVALLVTVTAYTAGPFTSAFFNPALAASVTFA 222
Query: 221 ANH---WNFHWIYWLGPLLAGLLVGLL 244
+ + +YWLGPL +L LL
Sbjct: 223 CSGHTLLEYVQVYWLGPLTGMVLAVLL 249
>gi|40538880 aquaporin 12A [Homo sapiens]
Length = 295
Score = 36.6 bits (83), Expect = 0.023
Identities = 51/202 (25%), Positives = 72/202 (35%), Gaps = 20/202 (9%)
Query: 55 SVIENGTDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYW 114
+++E G G P L L L +A + G NP VSL L+ +L L
Sbjct: 44 TLVELGPWAGDFGPDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFLMAEQSLPGTLLKL 103
Query: 115 VSQLLGGMLGAALAKAVSP---------EERFWNASGAAFVTVQEQGQVAGALVAEIILT 165
+Q LG L + + + +A T G + A A
Sbjct: 104 AAQGLGMQAACTLMRLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACAFCFHL 163
Query: 166 TLLALAVCMGAINEKTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANH-- 223
TLL L A + GP ++ VTV GP + NPA A +
Sbjct: 164 TLLHLRHSPPAYS----GP----AVALLVTVTAYTAGPFTSAFFNPALAASVTFACSGHT 215
Query: 224 -WNFHWIYWLGPLLAGLLVGLL 244
+ +YWLGPL +L LL
Sbjct: 216 LLEYVQVYWLGPLTGMVLAVLL 237
>gi|27370565 aquaporin 11 [Homo sapiens]
Length = 271
Score = 36.2 bits (82), Expect = 0.030
Identities = 47/194 (24%), Positives = 74/194 (38%), Gaps = 34/194 (17%)
Query: 69 ALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLN----LVMLLPYWVSQLLGGMLG 124
+L HGL L G NP + M++GG++ V LL VS L
Sbjct: 86 SLVHGLTL----------VGTSSNPCGVMMQMMLGGMSPETGAVRLLAQLVSALCSRYCT 135
Query: 125 AALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAIN------ 178
+AL W+ G V E+ + +L ++ AVC +
Sbjct: 136 SAL----------WSL-GLTQYHVSERSFACKNPIRVDLLKAVITEAVCSFLFHSALLHF 184
Query: 179 EKTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHW---NFHWIYWLGPL 235
++ + L + +T + AGG ++G NPA A + F +YWL P
Sbjct: 185 QEVRTKLRIHLLAALITFLVYAGGSLTGAVFNPALALSLHFMCFDEAFPQFFIVYWLAPS 244
Query: 236 LAGLLVGLLIRCFI 249
L LL+ L+ F+
Sbjct: 245 LGILLMILMFSFFL 258
>gi|6912666 sialin [Homo sapiens]
Length = 495
Score = 33.9 bits (76), Expect = 0.15
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 34/132 (25%)
Query: 39 LVELLGSALFI----FIGCLSVIENGTDTGLLQPALAHGLALGLVIATLGNISGGHFNPA 94
L+ ++G A+F+ FIGC D L L LG ++ S H + A
Sbjct: 369 LIGMIGPAVFLVAAGFIGC--------DYSLAVAFLTISTTLGGFCSS--GFSINHLDIA 418
Query: 95 VSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERF--W----------NASG 142
S A +L+G N +P GM+G +AK+++P+ W N G
Sbjct: 419 PSYAGILLGITNTFATIP--------GMVGPVIAKSLTPDNTVGEWQTVFYIAAAINVFG 470
Query: 143 AAFVTVQEQGQV 154
A F T+ +G+V
Sbjct: 471 AIFFTLFAKGEV 482
>gi|83921614 cytochrome b5 outer mitochondrial membrane precursor
[Homo sapiens]
Length = 150
Score = 29.6 bits (65), Expect = 2.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 228 WIYWLGPLLAGLLVGLLIRCFIGDGKT 254
W YW+ P++ +L+G L R + + K+
Sbjct: 123 WAYWILPIIGAVLLGFLYRYYTSESKS 149
>gi|197100650 NTPase, KAP family P-loop domain containing 1 isoform
1 [Homo sapiens]
Length = 619
Score = 29.3 bits (64), Expect = 3.6
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 64 GLLQPALAHGLALGLVIATLGNISGGHFNPAVSL------AAMLIGGLNLVM 109
GLL A GL +GL+ +LG + GH +P+ SL AA + G L+M
Sbjct: 130 GLLALLAALGLGVGLLYLSLGGHALGHGSPSGSLLKVFGGAATTLSGSGLLM 181
>gi|115647960 NTPase, KAP family P-loop domain containing 1 isoform
2 [Homo sapiens]
Length = 610
Score = 29.3 bits (64), Expect = 3.6
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 64 GLLQPALAHGLALGLVIATLGNISGGHFNPAVSL------AAMLIGGLNLVM 109
GLL A GL +GL+ +LG + GH +P+ SL AA + G L+M
Sbjct: 121 GLLALLAALGLGVGLLYLSLGGHALGHGSPSGSLLKVFGGAATTLSGSGLLM 172
>gi|115511028 transmembrane 4 L six family member 19 [Homo sapiens]
Length = 209
Score = 29.3 bits (64), Expect = 3.6
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 94 AVSLAAMLIGGLNLVMLLPYW-VSQLLGGMLG 124
++ AA+ G N+ +LLP W V+ LL G+LG
Sbjct: 21 SLGTAALFAAGANVALLLPNWDVTYLLRGLLG 52
>gi|117968621 MACRO domain containing 2 isoform 1 [Homo sapiens]
Length = 425
Score = 28.9 bits (63), Expect = 4.7
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 12/90 (13%)
Query: 3 GEIAMCEPEFGNDKAREPSVGGRWRVSWYERFVQPCLVELLGSALFIFIGCLSVIENGTD 62
G+I + E + + A +GG R PCL+ C ++ NG D
Sbjct: 77 GDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLA----------ECRNL--NGCD 124
Query: 63 TGLLQPALAHGLALGLVIATLGNISGGHFN 92
TG + + L VI T+G I+ GH N
Sbjct: 125 TGHAKITCGYDLPAKYVIHTVGPIARGHIN 154
>gi|4505697 pendrin [Homo sapiens]
Length = 780
Score = 28.5 bits (62), Expect = 6.2
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 95 VSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAA--------LAKAVSPEERFWNASGAAFV 146
V + ++ GGL + ++ Y L+GG AA L ++ + +N +
Sbjct: 196 VGIIQLIFGGLQIGFIVRYLADPLVGGFTTAAAFQVLVSQLKIVLNVSTKNYNGVLSIIY 255
Query: 147 TVQEQGQVAGALVAEIILTTLLALAVCMGA--INEKTKGPLAPFSIGFAVTVDILA 200
T+ E Q G LL + VCM +N++ + + P I V V I+A
Sbjct: 256 TLVEIFQNIGDTNLADFTAGLLTIVVCMAVKELNDRFRHKI-PVPIPIEVIVTIIA 310
>gi|110431350 endo-beta-N-acetylglucosaminidase [Homo sapiens]
Length = 743
Score = 28.5 bits (62), Expect = 6.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 76 LGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLL 119
+G+ + GN+ GG F+ SL + G ++ + P WV + L
Sbjct: 327 VGVDVFARGNVVGGRFDTDKSLELIRKHGFSVALFAPGWVYECL 370
>gi|73611906 phosphorylase kinase, beta isoform b [Homo sapiens]
Length = 1086
Score = 28.1 bits (61), Expect = 8.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 72 HGLALGLVIATLGNISGGHFNPAVSLAAMLIGGL 105
HG L LV+ NI G FNP + + A L G+
Sbjct: 605 HGRPLFLVLIREDNIRGSRFNPILDMLAALKKGI 638
>gi|4505783 phosphorylase kinase, beta isoform a [Homo sapiens]
Length = 1093
Score = 28.1 bits (61), Expect = 8.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 72 HGLALGLVIATLGNISGGHFNPAVSLAAMLIGGL 105
HG L LV+ NI G FNP + + A L G+
Sbjct: 612 HGRPLFLVLIREDNIRGSRFNPILDMLAALKKGI 645
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.141 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,950,036
Number of Sequences: 37866
Number of extensions: 423706
Number of successful extensions: 1207
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1152
Number of HSP's gapped (non-prelim): 28
length of query: 261
length of database: 18,247,518
effective HSP length: 100
effective length of query: 161
effective length of database: 14,460,918
effective search space: 2328207798
effective search space used: 2328207798
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.